CRAN Package Check Results for Package cg

Last updated on 2015-09-04 14:46:53.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0-2 4.16 75.49 79.64 NOTE
r-devel-linux-x86_64-debian-gcc 1.0-2 4.16 73.88 78.05 NOTE
r-devel-linux-x86_64-fedora-clang 1.0-2 150.02 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0-2 144.69 NOTE
r-devel-osx-x86_64-clang 1.0-2 125.05 NOTE
r-devel-windows-ix86+x86_64 1.0-2 15.00 114.00 129.00 NOTE
r-patched-linux-x86_64 1.0-2 4.04 75.98 80.02 NOTE
r-patched-solaris-sparc 1.0-2 909.50 NOTE
r-patched-solaris-x86 1.0-2 192.90 NOTE
r-release-linux-x86_64 1.0-2 4.02 75.30 79.33 NOTE
r-release-osx-x86_64-mavericks 1.0-2 OK
r-release-windows-ix86+x86_64 1.0-2 22.00 126.00 148.00 OK
r-oldrel-windows-ix86+x86_64 1.0-2 23.00 170.00 193.00 OK

Check Details

Version: 1.0-2
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     boxplot.cgOneFactorData print.cgOneFactorComparisonsTable
     print.cgOneFactorDescriptiveTable print.cgOneFactorDownweightedTable
     print.cgOneFactorFit print.cgOneFactorGlobalTest
     print.cgOneFactorGrpSummaryTable print.cgOneFactorSampleSizeTable
     print.cgPairedDifferenceComparisonsTable
     print.cgPairedDifferenceCorrelationTable
     print.cgPairedDifferenceDescriptiveTable
     print.cgPairedDifferenceDownweightedTable print.cgPairedDifferenceFit
     print.cgPairedDifferenceSampleSizeTable
     print.cgPairedDifferenceVarianceTable summary.cgOneFactorFit
     summary.cgPairedDifferenceFit
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0-2
Check: R code for possible problems
Result: NOTE
    boxplot.cgOneFactorData: no visible global function definition for
     ‘par’
    boxplot.cgOneFactorData : doBoxPlot: no visible global function
     definition for ‘points’
    boxplot.cgOneFactorData : doBoxPlot: no visible global function
     definition for ‘mtext’
    boxplot.cgOneFactorData: no visible global function definition for
     ‘mtext’
    boxplot.cgOneFactorData: no visible global function definition for
     ‘axis’
    boxplot.cgOneFactorData: no visible global function definition for
     ‘box’
    boxplotStamp: no visible global function definition for ‘par’
    boxplotStamp: no visible global function definition for ‘mtext’
    boxplotcensoreddata: no visible global function definition for ‘bxp’
    comparisons: no visible global function definition for ‘confint’
    comparisons: no visible global function definition for ‘qt’
    comparisons: no visible global function definition for ‘pt’
    comparisonsGraph.cgOneFactorComparisonsTable: no visible global
     function definition for ‘title’
    comparisonsGraph.cgOneFactorComparisonsTable: no visible global
     function definition for ‘par’
    comparisonsGraph.cgPairedDifferenceComparisonsTable: no visible global
     function definition for ‘title’
    comparisonsGraph.cgPairedDifferenceComparisonsTable: no visible global
     function definition for ‘par’
    comparisonsGraphStamp: no visible global function definition for
     ‘mtext’
    comparisonsTable.cgOneFactorFit: no visible global function definition
     for ‘vcov’
    comparisonsTable.cgPairedDifferenceFit : comparisons.paired: no visible
     global function definition for ‘qt’
    comparisonsTable.cgPairedDifferenceFit : comparisons.paired: no visible
     global function definition for ‘pt’
    comparisonsTable.cgPairedDifferenceFit: no visible global function
     definition for ‘vcov’
    comparisonsgraph: no visible global function definition for ‘par’
    comparisonsgraph: no visible global function definition for ‘plot’
    comparisonsgraph: no visible global function definition for ‘mtext’
    comparisonsgraph: no visible global function definition for ‘segments’
    comparisonsgraph: no visible global function definition for ‘abline’
    comparisonsgraph: no visible global function definition for ‘axis’
    comparisonsgraph: no visible global function definition for ‘box’
    comparisonsgraph: no visible global function definition for ‘title’
    comparisonsgraph: no visible global function definition for ‘text’
    correlationTable.cgPairedDifferenceData: no visible global function
     definition for ‘cor.test’
    descriptive.censoreddata : <anonymous>: no visible global function
     definition for ‘sd’
    descriptiveTable.cgOneFactorData : <anonymous>: no visible global
     function definition for ‘quantile’
    descriptiveTable.cgOneFactorData : <anonymous>: no visible global
     function definition for ‘sd’
    descriptiveTable.cgPairedDifferenceData : sumsts: no visible global
     function definition for ‘quantile’
    descriptiveTable.cgPairedDifferenceData : sumsts: no visible global
     function definition for ‘sd’
    diffGraph.cgPairedDifferenceData: no visible global function definition
     for ‘par’
    diffGraph.cgPairedDifferenceData : doDiffPlot: no visible global
     function definition for ‘abline’
    diffGraph.cgPairedDifferenceData : doDiffPlot: no visible global
     function definition for ‘points’
    diffGraph.cgPairedDifferenceData : doDiffPlot: no visible global
     function definition for ‘text’
    diffGraph.cgPairedDifferenceData: no visible global function definition
     for ‘title’
    diffGraph.cgPairedDifferenceData: no visible global function definition
     for ‘mtext’
    diffGraph.cgPairedDifferenceData: no visible global function definition
     for ‘axis’
    diffGraph.cgPairedDifferenceData: no visible global function definition
     for ‘box’
    errorBarGraph.cgOneFactorFit: no visible global function definition for
     ‘qt’
    errorBarGraph.cgOneFactorFit: no visible global function definition for
     ‘vcov’
    errorBarGraph.cgOneFactorFit: no visible global function definition for
     ‘confint’
    errorBarGraph.cgOneFactorFit: no visible global function definition for
     ‘title’
    errorBarGraph.cgOneFactorFit: no visible global function definition for
     ‘par’
    errorBarGraphApproximateStamp: no visible global function definition
     for ‘mtext’
    errorBarGraphStamp: no visible global function definition for ‘mtext’
    errorbargraph: no visible global function definition for ‘par’
    errorbargraph: no visible global function definition for ‘mtext’
    errorbargraph: no visible global function definition for ‘axis’
    errorbargraph: no visible global function definition for ‘title’
    errorbargraph: no visible global function definition for ‘box’
    fit.cgOneFactorData: no visible global function definition for ‘lm’
    fit.cgOneFactorData: no visible global function definition for ‘resid’
    fit.cgPairedDifferenceData: no visible global function definition for
     ‘lm’
    globalTest.cgOneFactorFit: no visible global function definition for
     ‘update’
    globalTest.cgOneFactorFit: no visible global function definition for
     ‘formula’
    globalTest.cgOneFactorFit: no visible global function definition for
     ‘lm’
    globalTest.cgOneFactorFit: no visible global function definition for
     ‘summary.lm’
    globalTest.cgOneFactorFit: no visible global function definition for
     ‘pf’
    globalTest.cgOneFactorFit: no visible global function definition for
     ‘pchisq’
    globalTest.cgOneFactorFit: no visible global function definition for
     ‘anova’
    graphStampCG: no visible global function definition for ‘mtext’
    grpsummary: no visible global function definition for ‘confint’
    grpsummary: no visible global function definition for ‘qt’
    makeZeroScore: no visible global function definition for ‘spline’
    minmaxTicks: no visible global function definition for ‘text’
    minmaxTicks: no visible global function definition for ‘par’
    multcompDone: no visible global function definition for ‘flush.console’
    multcompInform: no visible global function definition for
     ‘flush.console’
    plotGrpNameTicks: no visible global function definition for ‘axis’
    plotGrpNameTicks: no visible global function definition for ‘text’
    plotGrpNameTicks: no visible global function definition for ‘par’
    pointGraph.cgOneFactorData: no visible global function definition for
     ‘par’
    pointGraph.cgOneFactorData : doPlot: no visible global function
     definition for ‘plot’
    pointGraph.cgOneFactorData : doPlot: no visible global function
     definition for ‘text’
    pointGraph.cgOneFactorData : doPlot: no visible global function
     definition for ‘points’
    pointGraph.cgOneFactorData: no visible global function definition for
     ‘mtext’
    pointGraph.cgOneFactorData: no visible global function definition for
     ‘axis’
    pointGraph.cgOneFactorData: no visible global function definition for
     ‘box’
    pointGraph.cgOneFactorData: no visible global function definition for
     ‘abline’
    profileGraph.cgPairedDifferenceData: no visible global function
     definition for ‘par’
    profileGraph.cgPairedDifferenceData : doProfile: no visible global
     function definition for ‘plot’
    profileGraph.cgPairedDifferenceData : doProfile: no visible global
     function definition for ‘median’
    profileGraph.cgPairedDifferenceData : doProfile: no visible global
     function definition for ‘lines’
    profileGraph.cgPairedDifferenceData : doProfile: no visible global
     function definition for ‘text’
    profileGraph.cgPairedDifferenceData: no visible global function
     definition for ‘mtext’
    profileGraph.cgPairedDifferenceData: no visible global function
     definition for ‘axis’
    profileGraph.cgPairedDifferenceData: no visible global function
     definition for ‘box’
    qqGraph.cgOneFactorFit: no visible global function definition for
     ‘residuals’
    qqGraph.cgOneFactorFit: no visible global function definition for
     ‘resid’
    qqGraph.cgOneFactorFit: no visible binding for global variable ‘qnorm’
    qqGraph.cgOneFactorFit : <anonymous>: no visible global function
     definition for ‘qnorm’
    qqGraph.cgOneFactorFit : <anonymous>: no visible global function
     definition for ‘ppoints’
    qqGraph.cgOneFactorFit: no visible global function definition for ‘par’
    qqGraph.cgPairedDifferenceFit: no visible global function definition
     for ‘residuals’
    qqGraph.cgPairedDifferenceFit: no visible global function definition
     for ‘resid’
    qqGraph.cgPairedDifferenceFit: no visible binding for global variable
     ‘qnorm’
    qqGraph.cgPairedDifferenceFit : <anonymous>: no visible global function
     definition for ‘qnorm’
    qqGraph.cgPairedDifferenceFit : <anonymous>: no visible global function
     definition for ‘ppoints’
    qqGraph.cgPairedDifferenceFit: no visible global function definition
     for ‘mtext’
    qqGraph.cgPairedDifferenceFit: no visible global function definition
     for ‘par’
    qqgraph: no visible global function definition for ‘par’
    qqgraph: no visible global function definition for ‘qqnorm’
    qqgraph: no visible global function definition for ‘grid’
    qqgraph: no visible global function definition for ‘text’
    qqgraph: no visible global function definition for ‘points’
    qqgraph: no visible global function definition for ‘qqline’
    qqgraph: no visible global function definition for ‘qnorm’
    qqgraph: no visible global function definition for ‘abline’
    qqgraph: no visible global function definition for ‘axis’
    qqgraph: no visible global function definition for ‘box’
    qqgraph: no visible global function definition for ‘title’
    residualgrptrend.helper: no visible global function definition for
     ‘predict’
    residualgrptrend.helper: no visible global function definition for
     ‘lowess’
    rmTicks: no visible global function definition for ‘par’
    samplesize: no visible global function definition for ‘pf’
    samplesize: no visible global function definition for ‘qf’
    samplesizeGraph.cgOneFactorSampleSizeTable: no visible global function
     definition for ‘title’
    samplesizeGraph.cgOneFactorSampleSizeTable: no visible global function
     definition for ‘mtext’
    samplesizeGraph.cgOneFactorSampleSizeTable: no visible global function
     definition for ‘par’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘par’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘plot’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘grid’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘lines’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘mtext’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘title’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘axis’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘box’
    samplesizeGraph.cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘legend’
    samplesizegraph: no visible global function definition for ‘par’
    samplesizegraph: no visible global function definition for ‘plot’
    samplesizegraph: no visible global function definition for ‘grid’
    samplesizegraph: no visible global function definition for ‘lines’
    samplesizegraph: no visible global function definition for ‘mtext’
    samplesizegraph: no visible global function definition for ‘title’
    samplesizegraph: no visible global function definition for ‘axis’
    samplesizegraph: no visible global function definition for ‘box’
    samplesizegraph: no visible global function definition for ‘legend’
    setupGrpNameTicks: no visible global function definition for ‘par’
    setupGrpNameTicks: no visible global function definition for ‘strwidth’
    stndErr: no visible global function definition for ‘sd’
    varianceGraph.cgOneFactorFit: no visible global function definition for
     ‘resid’
    varianceGraph.cgOneFactorFit: no visible global function definition for
     ‘fitted’
    varianceGraph.cgOneFactorFit: no visible global function definition for
     ‘par’
    varianceGraph.cgOneFactorFit: no visible global function definition for
     ‘residuals’
    varianceGraph.cgOneFactorFit: no visible global function definition for
     ‘predict’
    variancegraph: no visible global function definition for ‘par’
    variancegraph: no visible global function definition for ‘mtext’
    variancegraph: no visible global function definition for ‘abline’
    variancegraph: no visible global function definition for ‘plot’
    variancegraph: no visible global function definition for ‘points’
    variancegraph: no visible global function definition for ‘lines’
    variancegraph: no visible global function definition for ‘lowess’
    variancegraph: no visible global function definition for ‘axis’
    variancegraph: no visible global function definition for ‘text’
    variancegraph: no visible global function definition for ‘box’
    variancegraph: no visible global function definition for ‘title’
    xTicksCex: no visible global function definition for ‘par’
    yTicksCex: no visible global function definition for ‘par’
    boxplot,cgOneFactorData: no visible global function definition for
     ‘par’
    boxplot,cgOneFactorData : doBoxPlot: no visible global function
     definition for ‘points’
    boxplot,cgOneFactorData : doBoxPlot: no visible global function
     definition for ‘mtext’
    boxplot,cgOneFactorData: no visible global function definition for
     ‘mtext’
    boxplot,cgOneFactorData: no visible global function definition for
     ‘axis’
    boxplot,cgOneFactorData: no visible global function definition for
     ‘box’
    comparisonsGraph,cgOneFactorComparisonsTable: no visible global
     function definition for ‘title’
    comparisonsGraph,cgOneFactorComparisonsTable: no visible global
     function definition for ‘par’
    comparisonsGraph,cgPairedDifferenceComparisonsTable: no visible global
     function definition for ‘title’
    comparisonsGraph,cgPairedDifferenceComparisonsTable: no visible global
     function definition for ‘par’
    comparisonsTable,cgOneFactorFit: no visible global function definition
     for ‘vcov’
    comparisonsTable,cgPairedDifferenceFit : comparisons.paired: no visible
     global function definition for ‘qt’
    comparisonsTable,cgPairedDifferenceFit : comparisons.paired: no visible
     global function definition for ‘pt’
    comparisonsTable,cgPairedDifferenceFit: no visible global function
     definition for ‘vcov’
    correlationTable,cgPairedDifferenceData: no visible global function
     definition for ‘cor.test’
    descriptiveTable,cgOneFactorData : <anonymous>: no visible global
     function definition for ‘quantile’
    descriptiveTable,cgOneFactorData : <anonymous>: no visible global
     function definition for ‘sd’
    descriptiveTable,cgPairedDifferenceData : sumsts: no visible global
     function definition for ‘quantile’
    descriptiveTable,cgPairedDifferenceData : sumsts: no visible global
     function definition for ‘sd’
    diffGraph,cgPairedDifferenceData: no visible global function definition
     for ‘par’
    diffGraph,cgPairedDifferenceData : doDiffPlot: no visible global
     function definition for ‘abline’
    diffGraph,cgPairedDifferenceData : doDiffPlot: no visible global
     function definition for ‘points’
    diffGraph,cgPairedDifferenceData : doDiffPlot: no visible global
     function definition for ‘text’
    diffGraph,cgPairedDifferenceData: no visible global function definition
     for ‘title’
    diffGraph,cgPairedDifferenceData: no visible global function definition
     for ‘mtext’
    diffGraph,cgPairedDifferenceData: no visible global function definition
     for ‘axis’
    diffGraph,cgPairedDifferenceData: no visible global function definition
     for ‘box’
    errorBarGraph,cgOneFactorFit: no visible global function definition for
     ‘qt’
    errorBarGraph,cgOneFactorFit: no visible global function definition for
     ‘vcov’
    errorBarGraph,cgOneFactorFit: no visible global function definition for
     ‘confint’
    errorBarGraph,cgOneFactorFit: no visible global function definition for
     ‘title’
    errorBarGraph,cgOneFactorFit: no visible global function definition for
     ‘par’
    fit,cgOneFactorData: no visible global function definition for ‘lm’
    fit,cgOneFactorData: no visible global function definition for ‘resid’
    fit,cgPairedDifferenceData: no visible global function definition for
     ‘lm’
    globalTest,cgOneFactorFit: no visible global function definition for
     ‘update’
    globalTest,cgOneFactorFit: no visible global function definition for
     ‘formula’
    globalTest,cgOneFactorFit: no visible global function definition for
     ‘lm’
    globalTest,cgOneFactorFit: no visible global function definition for
     ‘summary.lm’
    globalTest,cgOneFactorFit: no visible global function definition for
     ‘pf’
    globalTest,cgOneFactorFit: no visible global function definition for
     ‘pchisq’
    globalTest,cgOneFactorFit: no visible global function definition for
     ‘anova’
    grpSummaryTable,cgOneFactorFit: no visible global function definition
     for ‘vcov’
    pointGraph,cgOneFactorData: no visible global function definition for
     ‘par’
    pointGraph,cgOneFactorData : doPlot: no visible global function
     definition for ‘plot’
    pointGraph,cgOneFactorData : doPlot: no visible global function
     definition for ‘text’
    pointGraph,cgOneFactorData : doPlot: no visible global function
     definition for ‘points’
    pointGraph,cgOneFactorData: no visible global function definition for
     ‘mtext’
    pointGraph,cgOneFactorData: no visible global function definition for
     ‘axis’
    pointGraph,cgOneFactorData: no visible global function definition for
     ‘box’
    pointGraph,cgOneFactorData: no visible global function definition for
     ‘abline’
    profileGraph,cgPairedDifferenceData: no visible global function
     definition for ‘par’
    profileGraph,cgPairedDifferenceData : doProfile: no visible global
     function definition for ‘plot’
    profileGraph,cgPairedDifferenceData : doProfile: no visible global
     function definition for ‘median’
    profileGraph,cgPairedDifferenceData : doProfile: no visible global
     function definition for ‘lines’
    profileGraph,cgPairedDifferenceData : doProfile: no visible global
     function definition for ‘text’
    profileGraph,cgPairedDifferenceData: no visible global function
     definition for ‘mtext’
    profileGraph,cgPairedDifferenceData: no visible global function
     definition for ‘axis’
    profileGraph,cgPairedDifferenceData: no visible global function
     definition for ‘box’
    qqGraph,cgOneFactorFit: no visible global function definition for
     ‘residuals’
    qqGraph,cgOneFactorFit: no visible global function definition for
     ‘resid’
    qqGraph,cgOneFactorFit: no visible binding for global variable ‘qnorm’
    qqGraph,cgOneFactorFit : <anonymous>: no visible global function
     definition for ‘qnorm’
    qqGraph,cgOneFactorFit : <anonymous>: no visible global function
     definition for ‘ppoints’
    qqGraph,cgOneFactorFit: no visible global function definition for ‘par’
    qqGraph,cgPairedDifferenceFit: no visible global function definition
     for ‘residuals’
    qqGraph,cgPairedDifferenceFit: no visible global function definition
     for ‘resid’
    qqGraph,cgPairedDifferenceFit: no visible binding for global variable
     ‘qnorm’
    qqGraph,cgPairedDifferenceFit : <anonymous>: no visible global function
     definition for ‘qnorm’
    qqGraph,cgPairedDifferenceFit : <anonymous>: no visible global function
     definition for ‘ppoints’
    qqGraph,cgPairedDifferenceFit: no visible global function definition
     for ‘mtext’
    qqGraph,cgPairedDifferenceFit: no visible global function definition
     for ‘par’
    samplesizeGraph,cgOneFactorSampleSizeTable: no visible global function
     definition for ‘title’
    samplesizeGraph,cgOneFactorSampleSizeTable: no visible global function
     definition for ‘mtext’
    samplesizeGraph,cgOneFactorSampleSizeTable: no visible global function
     definition for ‘par’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘par’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘plot’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘grid’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘lines’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘mtext’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘title’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘axis’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘box’
    samplesizeGraph,cgPairedDifferenceSampleSizeTable: no visible global
     function definition for ‘legend’
    varianceGraph,cgOneFactorFit: no visible global function definition for
     ‘resid’
    varianceGraph,cgOneFactorFit: no visible global function definition for
     ‘fitted’
    varianceGraph,cgOneFactorFit: no visible global function definition for
     ‘par’
    varianceGraph,cgOneFactorFit: no visible global function definition for
     ‘residuals’
    varianceGraph,cgOneFactorFit: no visible global function definition for
     ‘predict’
    Undefined global functions or variables:
     abline anova axis box bxp confint cor.test fitted flush.console
     formula grid legend lines lm lowess median mtext par pchisq pf plot
     points ppoints predict pt qf qnorm qqline qqnorm qt quantile resid
     residuals sd segments spline strwidth summary.lm text title update
     vcov
    Consider adding
     importFrom("graphics", "abline", "axis", "box", "bxp", "grid",
     "legend", "lines", "mtext", "par", "plot", "points",
     "segments", "strwidth", "text", "title")
     importFrom("stats", "anova", "confint", "cor.test", "fitted",
     "formula", "lm", "lowess", "median", "pchisq", "pf",
     "ppoints", "predict", "pt", "qf", "qnorm", "qqline",
     "qqnorm", "qt", "quantile", "resid", "residuals", "sd",
     "spline", "summary.lm", "update", "vcov")
     importFrom("utils", "flush.console")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64