CRAN Package Check Results for Package chipPCR

Last updated on 2014-11-22 20:46:50.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.0.8-3 4.49 105.97 110.46 OK
r-devel-linux-x86_64-debian-gcc 0.0.8-3 4.23 103.90 108.13 OK
r-devel-linux-x86_64-fedora-clang 0.0.8-3 228.50 OK
r-devel-linux-x86_64-fedora-gcc 0.0.8-3 214.90 OK
r-devel-osx-x86_64-clang 0.0.8-3 191.07 OK
r-devel-windows-ix86+x86_64 0.0.8-3 14.00 151.00 165.00 OK
r-patched-linux-x86_64 0.0.8-3 4.38 112.75 117.12 OK
r-patched-solaris-sparc 0.0.8-3 1278.00 OK
r-patched-solaris-x86 0.0.8-3 278.50 OK
r-release-linux-ix86 0.0.8-3 5.88 123.96 129.83 OK
r-release-linux-x86_64 0.0.8-3 4.43 117.73 122.16 OK
r-release-osx-x86_64-mavericks 0.0.8-3 NOTE
r-release-osx-x86_64-snowleopard 0.0.8-3 OK
r-release-windows-ix86+x86_64 0.0.8-3 19.00 171.00 190.00 OK
r-oldrel-windows-ix86+x86_64 0.0.8-3 14.00 171.00 185.00 OK

Check Details

Version: 0.0.8-3
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Check raw melting curve (see examples of diffQ).
    Approximate and calculated Tm varri. This is an expected behaviour
    but the calculation should be confirmed with a plot (see examples of diffQ).
    The Tm calculation (fit, adj. R squared ~ 0.718, NRMSE ~ 0.136) is not optimal presumably due to noisy data.
    Check raw melting curve (see examples of diffQ).
    Approximate and calculated Tm varri. This is an expected behaviour
    but the calculation should be confirmed with a plot (see examples of diffQ).
    The Tm calculation (fit, adj. R squared ~ 0.552, NRMSE ~ 0.143) is not optimal presumably due to noisy data.
    Check raw melting curve (see examples of diffQ).
    Approximate and calculated Tm varri. This is an expected behaviour
    but the calculation should be confirmed with a plot (see examples of diffQ).
    The Tm calculation (fit, adj. R squared ~ 0.679, NRMSE ~ 0.146) is not optimal presumably due to noisy data.
    Check raw melting curve (see examples of diffQ).
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'chipPCR.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `titlesec.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    _test/chipPCR/vignettes/chipPCR.tex:55: ==> Fatal error occurred, no output PD
    F file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-mavericks