CRAN Package Check Results for Package clustergas

Last updated on 2015-08-04 23:48:06.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 0.84 22.66 23.50 WARN
r-devel-linux-x86_64-debian-gcc 1.0 0.80 23.10 23.90 WARN
r-devel-linux-x86_64-fedora-clang 1.0 46.40 WARN
r-devel-linux-x86_64-fedora-gcc 1.0 44.91 WARN
r-devel-osx-x86_64-clang 1.0 41.89 WARN
r-devel-windows-ix86+x86_64 1.0 7.00 60.00 67.00 WARN
r-patched-linux-x86_64 1.0 0.89 22.53 23.42 NOTE
r-patched-solaris-sparc 1.0 305.90 NOTE
r-patched-solaris-x86 1.0 57.90 NOTE
r-release-linux-x86_64 1.0 0.86 22.76 23.62 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-windows-ix86+x86_64 1.0 7.00 45.00 52.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 7.00 47.00 54.00 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘cluster’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: S3 generic/method consistency
Result: WARN
    sigma:
     function(object, ...)
    sigma.clust.HS:
     function(clustering)
    
    sigma:
     function(object, ...)
    sigma.clust.fitness:
     function(clustering)
    
    sigma:
     function(object, ...)
    sigma.dendo.fitness1:
     function(dendogram)
    
    sigma:
     function(object, ...)
    sigma.meanD.HS:
     function(dendogram)
    
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
    
    Found the following apparent S3 methods exported but not registered:
     sigma.clust.HS sigma.clust.fitness sigma.dendo.fitness1
     sigma.meanD.HS silhouette.clust silhouette.mean
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.0
Check: R code for possible problems
Result: NOTE
    CreateFiles: no visible global function definition for ‘write.table’
    agnes.gas: no visible global function definition for ‘flush.console’
    clustering.dendo: no visible global function definition for
     ‘flush.console’
    crossover.all: no visible global function definition for ‘runif’
    crossover.all2: no visible global function definition for ‘runif’
    dendrogram.graph: no visible global function definition for ‘as.dist’
    evol.cluster: no visible global function definition for ‘flush.console’
    exec.strag: no visible global function definition for ‘flush.console’
    improve.dendo: no visible global function definition for
     ‘flush.console’
    init.variables: no visible global function definition for ‘as.dist’
    init.varsearch: no visible global function definition for ‘as.dist’
    local.search: no visible global function definition for ‘flush.console’
    missvalue.knn : missvalue: no visible global function definition for
     ‘na.omit’
    mutation.all: no visible global function definition for ‘runif’
    selection: no visible global function definition for ‘runif’
    standard: no visible global function definition for ‘var’
    transf.tree : setlevels: no visible global function definition for
     ‘cutree’
    Undefined global functions or variables:
     as.dist cutree flush.console na.omit runif var write.table
    Consider adding
     importFrom("stats", "as.dist", "cutree", "na.omit", "runif", "var")
     importFrom("utils", "flush.console", "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.0
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'sigma.clust.HS':
     ‘sigma.clust.HS’
    
    S3 methods shown with full name in documentation object 'sigma.clust.fitness':
     ‘sigma.clust.fitness’
    
    S3 methods shown with full name in documentation object 'sigma.dendo.fitness1':
     ‘sigma.dendo.fitness1’
    
    S3 methods shown with full name in documentation object 'sigma.meanD.HS':
     ‘sigma.meanD.HS’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.0
Check: S3 generic/method consistency
Result: WARN
    sigma:
     function(object, ...)
    sigma.clust.HS:
     function(clustering)
    
    sigma:
     function(object, ...)
    sigma.clust.fitness:
     function(clustering)
    
    sigma:
     function(object, ...)
    sigma.dendo.fitness1:
     function(dendogram)
    
    sigma:
     function(object, ...)
    sigma.meanD.HS:
     function(dendogram)
    
    See section 'Generic functions and methods' in the 'Writing R
    Extensions' manual.
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     silhouette.clust silhouette.mean
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64