CRAN Package Check Results for Package comato

Last updated on 2016-05-25 09:46:44.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 1.0 3.22 39.70 42.93 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 93.39 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 81.32 NOTE
r-devel-osx-x86_64-clang 1.0 91.92 NOTE
r-devel-windows-ix86+x86_64 1.0 9.00 75.00 84.00 NOTE
r-patched-linux-x86_64 1.0 3.33 40.02 43.35 NOTE
r-patched-solaris-sparc 1.0 529.90 NOTE
r-patched-solaris-x86 1.0 118.80 NOTE
r-release-linux-x86_64 1.0 3.19 39.50 42.69 NOTE
r-release-osx-x86_64-mavericks 1.0 WARN
r-release-windows-ix86+x86_64 1.0 9.00 75.00 84.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 11.00 78.00 89.00 OK

Check Details

Version: 1.0
Check: R code for possible problems
Result: NOTE
    Hopkins.index: no visible global function definition for ‘runif’
    MBM.em: no visible global function definition for ‘runif’
    PAM.cluster: no visible global function definition for ‘dist’
    calculate.layout: no visible global function definition for ‘optim’
    min.distance: no visible global function definition for ‘dist’
    plot.conceptmap: no visible global function definition for ‘par’
    plot.conceptmap: no visible global function definition for ‘plot’
    plot.conceptmaps: no visible global function definition for ‘plot’
    Undefined global functions or variables:
     dist optim par plot runif
    Consider adding
     importFrom("graphics", "par", "plot")
     importFrom("stats", "dist", "optim", "runif")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0
Check: S3 generic/method consistency
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0
Check: replacement functions
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0
Check: foreign function calls
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0
Check: R code for possible problems
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 keyHopkins.index: no visible global function definition for ‘runif’
    MBM.em: no visible global function definition for ‘runif’
    PAM.cluster: no visible global function definition for ‘dist’
    calculate.layout: no visible global function definition for ‘optim’
    min.distance: no visible global function definition for ‘dist’
    plot.conceptmap: no visible global function definition for ‘par’
    plot.conceptmap: no visible global function definition for ‘plot’
    plot.conceptmaps: no visible global function definition for ‘plot’
    Undefined global functions or variables:
     dist optim par plot runif
    Consider adding
     importFrom("graphics", "par", "plot")
     importFrom("stats", "dist", "optim", "runif")
    to your NAMESPACE file.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0
Check: for missing documentation entries
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0
Check: for code/documentation mismatches
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0
Check: Rd \usage sections
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks