CRAN Package Check Results for Package coxphw

Last updated on 2015-07-28 09:46:55.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.0.0 2.53 16.37 18.90 NOTE
r-devel-linux-x86_64-debian-gcc 3.0.0 2.56 16.06 18.62 NOTE
r-devel-linux-x86_64-fedora-clang 3.0.0 35.22 NOTE
r-devel-linux-x86_64-fedora-gcc 3.0.0 33.07 NOTE
r-devel-osx-x86_64-clang 3.0.0 34.16 OK
r-devel-windows-ix86+x86_64 3.0.0 11.00 40.00 51.00 NOTE
r-patched-linux-x86_64 3.0.0 2.48 16.77 19.25 OK
r-patched-solaris-sparc 3.0.0 236.90 OK
r-patched-solaris-x86 3.0.0 57.90 OK
r-release-linux-x86_64 3.0.0 2.49 16.59 19.08 OK
r-release-osx-x86_64-mavericks 3.0.0 WARN
r-release-windows-ix86+x86_64 3.0.0 15.00 36.00 51.00 OK
r-oldrel-windows-ix86+x86_64 3.0.0 10.00 38.00 48.00 OK

Check Details

Version: 3.0.0
Check: R code for possible problems
Result: NOTE
    concord: no visible global function definition for ‘confint’
    concord: no visible global function definition for ‘coef’
    confint.coxphw: no visible global function definition for
     ‘confint.default’
    coxphw: no visible global function definition for ‘terms.formula’
    coxphw : fit: no visible global function definition for ‘prcomp’
    coxphw : fit: no visible global function definition for ‘predict’
    coxphw: no visible global function definition for ‘pchisq’
    coxphw: no visible global function definition for ‘qnorm’
    coxphw.fit: no visible global function definition for ‘prcomp’
    coxphw.fit: no visible global function definition for ‘predict’
    coxphw.fit: no visible binding for global variable ‘sd’
    coxphw.wei: no visible global function definition for ‘as.formula’
    coxphw.wei: no visible global function definition for
     ‘getFromNamespace’
    coxphw.wei : quant: no visible global function definition for
     ‘quantile’
    decomposeSurv: no visible global function definition for ‘as.formula’
    decomposeSurv: no visible global function definition for
     ‘model.extract’
    decomposeSurv: no visible global function definition for ‘model.frame’
    decomposeSurv: no visible global function definition for ‘model.matrix’
    decomposeSurv: no visible global function definition for ‘tail’
    fp.scale.coefs: no visible global function definition for ‘na.omit’
    plotshape: no visible global function definition for ‘qchisq’
    plotshape: no visible global function definition for ‘pchisq’
    plotshape: no visible global function definition for ‘lines’
    plotshape: no visible global function definition for ‘abline’
    plotw: no visible global function definition for ‘plot’
    plotw: no visible global function definition for ‘lines’
    plotw: no visible global function definition for ‘legend’
    print.coxphw: no visible global function definition for ‘pchisq’
    summary.coxphw: no visible global function definition for ‘pchisq’
    wald: no visible global function definition for ‘pchisq’
    Undefined global functions or variables:
     abline as.formula coef confint confint.default getFromNamespace
     legend lines model.extract model.frame model.matrix na.omit pchisq
     plot prcomp predict qchisq qnorm quantile sd tail terms.formula
    Consider adding
     importFrom("graphics", "abline", "legend", "lines", "plot")
     importFrom("stats", "as.formula", "coef", "confint", "confint.default",
     "model.extract", "model.frame", "model.matrix", "na.omit",
     "pchisq", "prcomp", "predict", "qchisq", "qnorm",
     "quantile", "sd", "terms.formula")
     importFrom("utils", "getFromNamespace", "tail")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 3.0.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
     Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
Flavor: r-release-osx-x86_64-mavericks