CRAN Package Check Results for Package cvCovEst

Last updated on 2021-04-22 18:48:31 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.5 14.29 262.41 276.70 OK
r-devel-linux-x86_64-debian-gcc 0.3.5 11.91 151.86 163.77 OK
r-devel-linux-x86_64-fedora-clang 0.3.5 302.36 OK
r-devel-linux-x86_64-fedora-gcc 0.3.5 251.29 OK
r-devel-windows-ix86+x86_64 0.3.5 34.00 239.00 273.00 OK
r-devel-windows-x86_64-gcc10-UCRT 0.3.5 OK
r-patched-linux-x86_64 0.3.5 13.65 198.63 212.28 WARN
r-patched-solaris-x86 0.3.5 310.20 OK
r-release-linux-x86_64 0.3.5 12.30 197.76 210.06 OK
r-release-macos-x86_64 0.3.5 OK
r-release-windows-ix86+x86_64 0.3.5 22.00 8.00 30.00 ERROR
r-oldrel-macos-x86_64 0.3.5 ERROR
r-oldrel-windows-ix86+x86_64 0.3.1 23.00 313.00 336.00 ERROR

Check Details

Version: 0.3.5
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Rd warning: /tmp/RtmpHRrhVH/R.INSTALL4e6521fbde07/cvCovEst/man/safeColScale.Rd:27: file link ‘.Machine’ in package ‘base’ does not exist and so has been treated as a topic
Flavor: r-patched-linux-x86_64

Version: 0.3.5
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavors: r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64

Version: 0.3.1
Check: examples
Result: ERROR
    Running examples in 'cvCovEst-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: plot.cvCovEst
    > ### Title: Generic Plot Method for cvCovest
    > ### Aliases: plot.cvCovEst
    >
    > ### ** Examples
    >
    > cv_dat <- cvCovEst(
    + dat = mtcars,
    + estimators = c(
    + thresholdingEst, sampleCovEst
    + ),
    + estimator_params = list(
    + thresholdingEst = list(gamma = seq(0.1, 0.9, 0.1))
    + ),
    + center = TRUE,
    + scale = TRUE
    + )
    >
    > plot(x = cv_dat, dat_orig = mtcars)
    Error in thresholdingEst(dat = c(0.150884824647657, 0.150884824647657, :
     unused argument (`2` = NA)
    Calls: plot ... cvSummaryPlot -> cvEigenPlot -> lapply -> FUN -> <Anonymous>
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.3.1
Check: tests
Result: ERROR
     Running 'spelling.R' [0s]
     Running 'testthat.R' [201s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(cvCovEst)
     cvCovEst v0.3.1: Cross-Validated Covariance Matrix Estimation
     >
     > test_check("cvCovEst")
     == Failed tests ================================================================
     -- Error (test-plot-functions.R:104:3): Only supported summary statistics are allowed for plotting --
     Error: unused argument (`3` = NA)
     Backtrace:
     x
     1. +-testthat::expect_silent(...) test-plot-functions.R:104:2
     2. | \-testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
     3. | +-testthat:::.capture(...)
     4. | | +-withr::with_output_sink(...)
     5. | | | \-base::force(code)
     6. | | +-base::withCallingHandlers(...)
     7. | | \-base::withVisible(code)
     8. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
     9. \-cvCovEst:::cvMultiMelt(...)
     10. \-base::lapply(...)
     11. \-cvCovEst:::FUN(X[[i]], ...)
     12. \-rlang::exec(est, !!!est_args)
     -- Error (test-plot-functions.R:226:3): Plot method throws other errors where appripriate --
     Error: unused argument (`3` = NA)
     Backtrace:
     x
     1. +-testthat::expect_message(...) test-plot-functions.R:226:2
     2. | \-testthat:::quasi_capture(enquo(object), label, capture_messages)
     3. | +-testthat:::.capture(...)
     4. | | \-base::withCallingHandlers(...)
     5. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
     6. \-cvCovEst:::plot.cvCovEst(...)
     7. \-cvCovEst:::cvSummaryPlot(...)
     8. \-cvCovEst:::cvEigenPlot(...)
     9. \-base::lapply(...)
     10. \-cvCovEst:::FUN(X[[i]], ...)
     11. \-rlang::exec(estimator, !!!est_args)
     -- Error (test-plot-functions.R:236:1): (code run outside of `test_that()`) ----
     Error: unused argument (`3` = NA)
     Backtrace:
     x
     1. \-cvCovEst:::plot.cvCovEst(...) test-plot-functions.R:236:0
     2. \-cvCovEst:::cvSummaryPlot(...)
     3. \-cvCovEst:::cvEigenPlot(...)
     4. \-base::lapply(...)
     5. \-cvCovEst:::FUN(X[[i]], ...)
     6. \-rlang::exec(estimator, !!!est_args)
     -- Failure (test-safeColScale.R:36:3): `safeColScale` ouputs a matrix object ---
     class(safeColScale(dat, center, scale)) not equal to c("matrix", "array").
     Lengths differ: 1 is not 2
     -- Failure (test-safeColScale.R:37:3): `safeColScale` ouputs a matrix object ---
     class(safeColScale(as(dat, "dgCMatrix"), center, scale)) not equal to c("matrix", "array").
     Lengths differ: 1 is not 2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 159 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.3.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'using_cvCovEst.Rmd' using rmarkdown
    Quitting from lines 313-315 (using_cvCovEst.Rmd)
    Error: processing vignette 'using_cvCovEst.Rmd' failed with diagnostics:
    unused argument (`2` = NA)
    --- failed re-building 'using_cvCovEst.Rmd'
    
    SUMMARY: processing the following file failed:
     'using_cvCovEst.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64