CRAN Package Check Results for Package dendextend

Last updated on 2017-10-19 06:46:56.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.5.2 4.18 193.77 197.95 OK
r-devel-linux-x86_64-debian-gcc 1.5.2 5.32 208.81 214.13 OK
r-devel-linux-x86_64-fedora-clang 1.5.2 408.69 OK
r-devel-linux-x86_64-fedora-gcc 1.5.2 414.06 OK
r-devel-windows-ix86+x86_64 1.5.2 13.00 289.00 302.00 OK
r-patched-linux-x86_64 1.5.2 4.68 205.22 209.91 OK
r-patched-solaris-x86 1.5.2 448.70 WARN
r-release-linux-x86_64 1.5.2 4.38 208.68 213.06 OK
r-release-windows-ix86+x86_64 1.5.2 23.00 396.00 419.00 OK
r-release-osx-x86_64 1.5.2 WARN
r-oldrel-windows-ix86+x86_64 1.5.2 18.00 393.00 411.00 OK
r-oldrel-osx-x86_64 1.5.2 WARN

Check Details

Version: 1.5.2
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘microbenchmark’
Flavor: r-patched-solaris-x86

Version: 1.5.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    ---------------------
    Welcome to dendextend version 1.5.2
    Type citation('dendextend') for how to cite the package.
    
    Type browseVignettes(package = 'dendextend') for the package vignette.
    The github page is: https://github.com/talgalili/dendextend/
    
    Suggestions and bug-reports can be submitted at: https://github.com/talgalili/dendextend/issues
    Or contact: <tal.galili@gmail.com>
    
     To suppress this message use: suppressPackageStartupMessages(library(dendextend))
    ---------------------
    
    
    Attaching package: 'dendextend'
    
    The following object is masked from 'package:stats':
    
     cutree
    
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'gplots'
    
    The following objects are masked from 'package:seriation':
    
     bluered, greenred
    
    The following object is masked from 'package:stats':
    
     lowess
    
    Loading required package: pkgmaker
    Loading required package: registry
    
    Attaching package: 'pkgmaker'
    
    The following object is masked from 'package:base':
    
     isNamespaceLoaded
    
    Loading required package: rngtools
    # NOTE - CRAN check detected: limiting maximum number of cores [2/16]
    NMF - BioConductor layer [OK] | Shared memory capabilities [OK] | Cores 2/2 | CRAN check
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 925-927 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.5.2
Check: Rd cross-references
Result: NOTE
    Packages unavailable to check Rd xrefs: ‘WGCNA’, ‘moduleColor’
Flavor: r-release-osx-x86_64

Version: 1.5.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    
    The following object is masked from 'package:stats':
    
     lowess
    
    Loading required package: pkgmaker
    Loading required package: registry
    
    Attaching package: 'pkgmaker'
    
    The following object is masked from 'package:base':
    
     isNamespaceLoaded
    
    Loading required package: rngtools
    # NOTE - CRAN check detected: limiting maximum number of cores [2/8]
    NMF - BioConductor layer [NO: missing Biobase] | Shared memory capabilities [OK] | Cores 2/2 | CRAN check
     To enable the Bioconductor layer, try: install.extras('
    NMF
    ') [with Bioconductor repository enabled]
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 925-927 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.5.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    The following objects are masked from 'package:seriation':
    
     bluered, greenred
    
    The following object is masked from 'package:stats':
    
     lowess
    
    Loading required package: pkgmaker
    Loading required package: registry
    
    Attaching package: 'pkgmaker'
    
    The following object is masked from 'package:base':
    
     isNamespaceLoaded
    
    Loading required package: rngtools
    # NOTE - CRAN check detected: limiting maximum number of cores [2/16]
    NMF - BioConductor layer [OK] | Shared memory capabilities [OK] | Cores 2/2 | CRAN check
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Quitting from lines 925-927 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-oldrel-osx-x86_64