CRAN Package Check Results for Package detect

Last updated on 2015-08-05 11:47:54.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3-2 0.83 23.91 24.74 NOTE
r-devel-linux-x86_64-debian-gcc 0.3-2 0.85 23.64 24.49 NOTE
r-devel-linux-x86_64-fedora-clang 0.3-2 47.85 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3-2 44.62 NOTE
r-devel-osx-x86_64-clang 0.3-2 41.29 NOTE
r-devel-windows-ix86+x86_64 0.3-2 7.00 50.00 57.00 NOTE
r-patched-linux-x86_64 0.3-2 0.86 23.57 24.42 NOTE
r-patched-solaris-sparc 0.3-2 309.70 NOTE
r-patched-solaris-x86 0.3-2 61.60 NOTE
r-release-linux-x86_64 0.3-2 1.13 24.86 25.99 NOTE
r-release-osx-x86_64-mavericks 0.3-2 NOTE
r-release-windows-ix86+x86_64 0.3-2 7.00 41.00 48.00 NOTE
r-oldrel-windows-ix86+x86_64 0.3-2 6.00 42.00 48.00 NOTE

Check Details

Version: 0.3-2
Check: package namespace information
Result: NOTE
     Namespace with empty importFrom: ‘Formula’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3-2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘dclone’ ‘dcmle’ ‘pbapply’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3-2
Check: R code for possible problems
Result: NOTE
    bootstrap.svisit: no visible global function definition for ‘coef’
    bootstrap.svisit : bfun: no visible global function definition for
     ‘coef’
    bootstrap.svisit: no visible global function definition for ‘pblapply’
    bymethod: no visible global function definition for ‘aggregate’
    cmulti.fit : nll.fun1: no visible global function definition for
     ‘poisson’
    cmulti.fit : nll.fun1: no visible global function definition for
     ‘binomial’
    cmulti.fit : nll.fun2: no visible global function definition for
     ‘poisson’
    cmulti.fit : nll.fun2: no visible global function definition for
     ‘binomial’
    cmulti.fit: no visible global function definition for ‘optim’
    cmulti.fit : nll.fun3: no visible global function definition for
     ‘poisson’
    cmulti.fit : nll.fun4: no visible global function definition for
     ‘poisson’
    cmulti.fit0 : <anonymous>: no visible global function definition for
     ‘poisson’
    cmulti.fit0 : <anonymous>: no visible global function definition for
     ‘binomial’
    cmulti.fit0: no visible global function definition for ‘optimize’
    cmulti.fit0: no visible global function definition for ‘optim’
    cmulti2.fit : nll.fun: no visible global function definition for
     ‘poisson’
    cmulti2.fit: no visible global function definition for ‘optim’
    confint.svabu: no visible global function definition for ‘coef’
    confint.svabu: no visible global function definition for ‘qnorm’
    confint.svabu: no visible binding for global variable ‘quantile’
    confint.svocc: no visible global function definition for ‘coef’
    confint.svocc: no visible global function definition for ‘qnorm’
    confint.svocc: no visible binding for global variable ‘quantile’
    convertEDR: no visible global function definition for ‘uniroot’
    dFormula: no visible global function definition for ‘Formula’
    dFormula: no visible binding for global variable ‘na.pass’
    dFormula: no visible global function definition for ‘model.response’
    dFormula: no visible global function definition for ‘model.part’
    drop.scope.svisit: no visible global function definition for
     ‘factor.scope’
    drop1.svabu: no visible global function definition for ‘model.response’
    drop1.svabu : Safe_pchisq: no visible global function definition for
     ‘pchisq’
    drop1.svabu: no visible global function definition for ‘formula’
    drop1.svocc: no visible global function definition for ‘model.response’
    drop1.svocc : Safe_pchisq: no visible global function definition for
     ‘pchisq’
    drop1.svocc: no visible global function definition for ‘formula’
    extractAIC.svisit: no visible global function definition for ‘coef’
    extractBOOT.svabu: no visible global function definition for ‘coef’
    extractBOOT.svabu: no visible binding for global variable ‘sd’
    extractBOOT.svabu: no visible global function definition for ‘cov’
    extractBOOT.svabu: no visible global function definition for ‘cor’
    extractBOOT.svocc: no visible global function definition for ‘coef’
    extractBOOT.svocc: no visible binding for global variable ‘sd’
    extractBOOT.svocc: no visible global function definition for ‘cov’
    extractBOOT.svocc: no visible global function definition for ‘cor’
    extractMLE.svocc: no visible global function definition for ‘coef’
    extractMLE.svocc: no visible global function definition for ‘dcsd’
    fitted.cmulti: no visible global function definition for ‘poisson’
    fitted.cmulti: no visible global function definition for ‘coef’
    hbootindex: no visible global function definition for ‘pbsapply’
    is.present.svisit: no visible global function definition for ‘fitted’
    is.present.svisit: no visible global function definition for ‘rbinom’
    model.matrix.svabu: no visible global function definition for ‘coef’
    plot.svabu: no visible global function definition for ‘fitted’
    plot.svabu: no visible global function definition for ‘dpois’
    plot.svabu: no visible global function definition for ‘dbinom’
    plot.svabu: no visible global function definition for ‘par’
    plot.svabu: no visible global function definition for ‘plot’
    plot.svabu: no visible global function definition for ‘polygon’
    plot.svabu: no visible global function definition for ‘lines’
    plot.svabu: no visible global function definition for ‘points’
    plot.svabu: no visible global function definition for ‘legend’
    plot.svabu: no visible global function definition for ‘abline’
    predict.svabu: no visible global function definition for ‘fitted’
    predict.svabu: no visible global function definition for ‘poisson’
    predict.svabu: no visible global function definition for ‘binomial’
    predict.svabu: no visible global function definition for ‘coef’
    predict.svabu: no visible binding for global variable ‘sd’
    predict.svocc: no visible global function definition for ‘binomial’
    predict.svocc: no visible global function definition for ‘coef’
    predict.svocc: no visible binding for global variable ‘sd’
    predictMCMC.svabu: no visible global function definition for
     ‘make.symmetric’
    predictMCMC.svabu: no visible global function definition for ‘coef’
    predictMCMC.svabu: no visible global function definition for ‘fitted’
    predictMCMC.svabu: no visible global function definition for ‘jags.fit’
    predictMCMC.svabu: no visible global function definition for ‘dcsd’
    print.summary.cmulti: no visible global function definition for
     ‘printCoefmat’
    print.summary.svabu: no visible global function definition for
     ‘printCoefmat’
    print.summary.svocc: no visible global function definition for
     ‘printCoefmat’
    rocplot.svocc: no visible global function definition for ‘lines’
    rocplot.svocc: no visible global function definition for ‘plot’
    simulate.svabu: no visible global function definition for ‘runif’
    simulate.svabu: no visible global function definition for ‘fitted’
    simulate.svabu : <anonymous>: no visible global function definition for
     ‘rbinom’
    simulate.svabu : <anonymous>: no visible global function definition for
     ‘rpois’
    simulate.svocc: no visible global function definition for ‘runif’
    simulate.svocc : <anonymous>: no visible global function definition for
     ‘rbinom’
    summary.cmulti: no visible global function definition for ‘coef’
    summary.cmulti: no visible global function definition for ‘pnorm’
    summary.svabu: no visible global function definition for ‘coef’
    summary.svabu: no visible global function definition for ‘pnorm’
    summary.svocc: no visible global function definition for ‘pnorm’
    svabu.fit : nll.P: no visible global function definition for ‘dpois’
    svabu.fit : nll.P: no visible global function definition for ‘dbinom’
    svabu.fit : nll.ZIP1: no visible global function definition for ‘dpois’
    svabu.fit : nll.ZIP1: no visible global function definition for
     ‘dbinom’
    svabu.fit : nll.ZIP: no visible global function definition for ‘dpois’
    svabu.fit : nll.ZIP: no visible global function definition for ‘dbinom’
    svabu.fit: no visible global function definition for ‘binomial’
    svabu.fit: no visible global function definition for ‘make.link’
    svabu.fit: no visible global function definition for ‘glm.fit’
    svabu.fit: no visible global function definition for ‘poisson’
    svabu.fit: no visible global function definition for ‘optim’
    svabu.step : step.results: no visible global function definition for
     ‘formula’
    svabu.step: no visible global function definition for ‘extractAIC’
    svabu.step: no visible global function definition for ‘formula’
    svabu.step: no visible global function definition for ‘factor.scope’
    svabu.step: no visible global function definition for ‘as.formula’
    svisitFormula: no visible global function definition for ‘as.formula’
    svisitFormula: no visible global function definition for
     ‘model.response’
    svisitFormula: no visible global function definition for ‘.getXlevels’
    svocc.fit : singleocc.PMLE: no visible global function definition for
     ‘binomial’
    svocc.fit: no visible global function definition for ‘binomial’
    svocc.fit: no visible global function definition for ‘make.link’
    svocc.fit: no visible global function definition for ‘glm.fit’
    svocc.fit: no visible global function definition for ‘coef’
    svocc.fit: no visible global function definition for ‘makeDcFit’
    svocc.fit: no visible global function definition for ‘dcmle’
    svocc.fit: no visible global function definition for ‘optim’
    svocc.fit: no visible global function definition for ‘dcsd’
    svocc.fit: no visible global function definition for ‘gelman.diag’
    svocc.step : step.results: no visible global function definition for
     ‘formula’
    svocc.step: no visible global function definition for ‘extractAIC’
    svocc.step: no visible global function definition for ‘formula’
    svocc.step: no visible global function definition for ‘factor.scope’
    svocc.step: no visible global function definition for ‘as.formula’
    update.formula.svisit: no visible global function definition for
     ‘as.formula’
    update.formula.svisit: no visible global function definition for
     ‘formula’
    update.formula.svisit: no visible global function definition for
     ‘terms.formula’
    update.svisit: no visible global function definition for ‘formula’
    variable.names.svisit: no visible global function definition for ‘coef’
    vcov.cmulti: no visible global function definition for ‘coef’
    vcov.svabu: no visible global function definition for ‘coef’
    vcov.svocc: no visible global function definition for ‘coef’
    Undefined global functions or variables:
     .getXlevels Formula abline aggregate as.formula binomial coef cor cov
     dbinom dcmle dcsd dpois extractAIC factor.scope fitted formula
     gelman.diag glm.fit jags.fit legend lines make.link make.symmetric
     makeDcFit model.part model.response na.pass optim optimize par
     pblapply pbsapply pchisq plot pnorm points poisson polygon
     printCoefmat qnorm quantile rbinom rpois runif sd terms.formula
     uniroot
    Consider adding
     importFrom("graphics", "abline", "legend", "lines", "par", "plot",
     "points", "polygon")
     importFrom("stats", ".getXlevels", "aggregate", "as.formula",
     "binomial", "coef", "cor", "cov", "dbinom", "dpois",
     "extractAIC", "factor.scope", "fitted", "formula",
     "glm.fit", "make.link", "model.response", "na.pass",
     "optim", "optimize", "pchisq", "pnorm", "poisson",
     "printCoefmat", "qnorm", "quantile", "rbinom", "rpois",
     "runif", "sd", "terms.formula", "uniroot")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.3-2
Check: R code for possible problems
Result: NOTE
    bootstrap.svisit: no visible global function definition for ‘pblapply’
    dFormula: no visible global function definition for ‘Formula’
    dFormula: no visible global function definition for ‘model.part’
    extractMLE.svocc: no visible global function definition for ‘dcsd’
    hbootindex: no visible global function definition for ‘pbsapply’
    predictMCMC.svabu: no visible global function definition for
     ‘make.symmetric’
    predictMCMC.svabu: no visible global function definition for ‘jags.fit’
    predictMCMC.svabu: no visible global function definition for ‘dcsd’
    svocc.fit: no visible global function definition for ‘makeDcFit’
    svocc.fit: no visible global function definition for ‘dcmle’
    svocc.fit: no visible global function definition for ‘dcsd’
    svocc.fit: no visible global function definition for ‘gelman.diag’
    Undefined global functions or variables:
     Formula dcmle dcsd gelman.diag jags.fit make.symmetric makeDcFit
     model.part pblapply pbsapply
Flavor: r-devel-osx-x86_64-clang

Version: 0.3-2
Check: R code for possible problems
Result: NOTE
    bootstrap.svisit: no visible global function definition for ‘pblapply’
    dFormula: no visible global function definition for ‘Formula’
    dFormula: no visible global function definition for ‘model.part’
    extractMLE.svocc: no visible global function definition for ‘dcsd’
    hbootindex: no visible global function definition for ‘pbsapply’
    predictMCMC.svabu: no visible global function definition for
     ‘make.symmetric’
    predictMCMC.svabu: no visible global function definition for ‘jags.fit’
    predictMCMC.svabu: no visible global function definition for ‘dcsd’
    svocc.fit: no visible global function definition for ‘makeDcFit’
    svocc.fit: no visible global function definition for ‘dcmle’
    svocc.fit: no visible global function definition for ‘dcsd’
    svocc.fit: no visible global function definition for ‘gelman.diag’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64