CRAN Package Check Results for Package dhglm

Last updated on 2015-07-28 03:48:10.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2 2.56 90.71 93.27 NOTE
r-devel-linux-x86_64-debian-gcc 1.2 2.54 90.16 92.71 NOTE
r-devel-linux-x86_64-fedora-clang 1.2 197.18 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2 189.88 NOTE
r-devel-osx-x86_64-clang 1.2 181.99 NOTE
r-devel-windows-ix86+x86_64 1.2 7.00 129.00 136.00 NOTE
r-patched-linux-x86_64 1.2 2.80 91.64 94.44 NOTE
r-patched-solaris-sparc 1.2 1654.80 NOTE
r-patched-solaris-x86 1.2 333.90 NOTE
r-release-linux-x86_64 1.2 2.56 90.90 93.46 NOTE
r-release-osx-x86_64-mavericks 1.2 NOTE
r-release-windows-ix86+x86_64 1.2 11.00 172.00 183.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2 13.00 146.00 159.00 NOTE

Check Details

Version: 1.2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘Matrix’ ‘boot’ ‘numDeriv’
     Please remove these calls from your code.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    dhglmfit: warning in HGLMFrames(mc, formulaMean, contrast = NULL):
     partial argument match of ‘contrast’ to ‘contrasts’
    dhglmfit: warning in HGLMFrames(mc, formulaLambda, contrast = NULL):
     partial argument match of ‘contrast’ to ‘contrasts’
    dhglmfit: warning in HGLMFrames(mc, formulaDisp, contrast = NULL):
     partial argument match of ‘contrast’ to ‘contrasts’
    HGLMFactorList : <anonymous>: no visible global function definition for
     ‘as’
    HGLMFactorList : <anonymous>: no visible global function definition for
     ‘validObject’
    HGLMFactorList : <anonymous>: no visible global function definition for
     ‘as.formula’
    HGLMFactorList : <anonymous>: no visible global function definition for
     ‘model.matrix’
    HGLMFrames: no visible global function definition for ‘model.response’
    HGLMFrames: no visible global function definition for ‘is.empty.model’
    HGLMFrames: no visible global function definition for ‘model.matrix’
    HGLMFrames: no visible global function definition for ‘model.weights’
    HGLMFrames: no visible global function definition for ‘model.offset’
    dhglmfit: no visible global function definition for ‘glm’
    dhglmfit: no visible global function definition for ‘gaussian’
    dhglmfit: no visible global function definition for ‘poisson’
    dhglmfit: no visible global function definition for ‘binomial’
    dhglmfit: no visible global function definition for ‘Gamma’
    dhglmfit: no visible global function definition for ‘pnorm’
    dhglmfit: no visible global function definition for ‘dnorm’
    expandSlash : <anonymous>: no visible global function definition for
     ‘makeInteraction’
    hglmfit_corr: no visible global function definition for ‘glm’
    hglmfit_corr: no visible global function definition for ‘gaussian’
    hglmfit_corr: no visible global function definition for ‘poisson’
    hglmfit_corr: no visible global function definition for ‘binomial’
    hglmfit_corr: no visible global function definition for ‘Gamma’
    hglmfit_corr: no visible global function definition for ‘pnorm’
    plotdhglm: no visible global function definition for ‘par’
    plotdhglm: no visible global function definition for ‘smooth.spline’
    plotdhglm: no visible global function definition for ‘plot’
    plotdhglm: no visible global function definition for ‘lines’
    plotdhglm: no visible global function definition for ‘qqnorm’
    plotdhglm: no visible global function definition for ‘qqline’
    plotdhglm: no visible global function definition for ‘hist’
    Undefined global functions or variables:
     Gamma as as.formula binomial dnorm gaussian glm hist is.empty.model
     lines makeInteraction model.matrix model.offset model.response
     model.weights par plot pnorm poisson qqline qqnorm smooth.spline
     validObject
    Consider adding
     importFrom("graphics", "hist", "lines", "par", "plot")
     importFrom("methods", "as", "validObject")
     importFrom("stats", "Gamma", "as.formula", "binomial", "dnorm",
     "gaussian", "glm", "is.empty.model", "model.matrix",
     "model.offset", "model.response", "model.weights", "pnorm",
     "poisson", "qqline", "qqnorm", "smooth.spline")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    dhglmfit: warning in HGLMFrames(mc, formulaMean, contrast = NULL):
     partial argument match of 'contrast' to 'contrasts'
    dhglmfit: warning in HGLMFrames(mc, formulaLambda, contrast = NULL):
     partial argument match of 'contrast' to 'contrasts'
    dhglmfit: warning in HGLMFrames(mc, formulaDisp, contrast = NULL):
     partial argument match of 'contrast' to 'contrasts'
    dhglmfit: warning in glm(y ~ x - 1, family = gaussian(link = RespLink),
     weight = inv_disp, offset = Offset): partial argument match of
     'weight' to 'weights'
    dhglmfit: warning in glm(y ~ x - 1, family = poisson(link = RespLink),
     weight = inv_disp, offset = Offset): partial argument match of
     'weight' to 'weights'
    dhglmfit: warning in glm(cbind(y, BinomialDen - y) ~ x - 1, family =
     binomial(link = RespLink), weight = inv_disp, offset = Offset):
     partial argument match of 'weight' to 'weights'
    dhglmfit: warning in glm(y ~ x - 1, family = Gamma(link = RespLink),
     weight = inv_disp, offset = Offset): partial argument match of
     'weight' to 'weights'
    dhglmfit: warning in glm(resp_disp ~ x_disp - 1, family = Gamma(link =
     RespLink_disp), weight = weight_disp, offset = Offset_disp): partial
     argument match of 'weight' to 'weights'
    expandSlash : <anonymous>: no visible global function definition for
     ‘makeInteraction’
    Undefined global functions or variables:
     makeInteraction
Flavor: r-devel-osx-x86_64-clang

Version: 1.2
Check: R code for possible problems
Result: NOTE
    dhglmfit: warning in HGLMFrames(mc, formulaMean, contrast = NULL):
     partial argument match of ‘contrast’ to ‘contrasts’
    dhglmfit: warning in HGLMFrames(mc, formulaLambda, contrast = NULL):
     partial argument match of ‘contrast’ to ‘contrasts’
    dhglmfit: warning in HGLMFrames(mc, formulaDisp, contrast = NULL):
     partial argument match of ‘contrast’ to ‘contrasts’
    dhglmfit: warning in glm(y ~ x - 1, family = gaussian(link = RespLink),
     weight = inv_disp, offset = Offset): partial argument match of
     ‘weight’ to ‘weights’
    dhglmfit: warning in glm(y ~ x - 1, family = poisson(link = RespLink),
     weight = inv_disp, offset = Offset): partial argument match of
     ‘weight’ to ‘weights’
    dhglmfit: warning in glm(cbind(y, BinomialDen - y) ~ x - 1, family =
     binomial(link = RespLink), weight = inv_disp, offset = Offset):
     partial argument match of ‘weight’ to ‘weights’
    dhglmfit: warning in glm(y ~ x - 1, family = Gamma(link = RespLink),
     weight = inv_disp, offset = Offset): partial argument match of
     ‘weight’ to ‘weights’
    dhglmfit: warning in glm(resp_disp ~ x_disp - 1, family = Gamma(link =
     RespLink_disp), weight = weight_disp, offset = Offset_disp): partial
     argument match of ‘weight’ to ‘weights’
    expandSlash : <anonymous>: no visible global function definition for
     ‘makeInteraction’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64