CRAN Package Check Results for Package disclapmix

Last updated on 2015-09-02 11:48:21.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6.1 14.17 18.44 32.61 NOTE
r-devel-linux-x86_64-debian-gcc 1.6.1 14.09 17.82 31.91 NOTE
r-devel-linux-x86_64-fedora-clang 1.6.1 67.46 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6.1 61.73 NOTE
r-devel-osx-x86_64-clang 1.6.1 49.44 OK
r-devel-windows-ix86+x86_64 1.6.1 74.00 50.00 124.00 NOTE
r-patched-linux-x86_64 1.6.1 14.25 19.03 33.28 OK
r-patched-solaris-sparc 1.6.1 394.90 OK
r-patched-solaris-x86 1.6.1 82.70 OK
r-release-linux-x86_64 1.6.1 16.08 18.81 34.89 OK
r-release-osx-x86_64-mavericks 1.6.1 OK
r-release-windows-ix86+x86_64 1.6.1 68.00 51.00 119.00 OK
r-oldrel-windows-ix86+x86_64 1.6.1 76.00 64.00 140.00 OK

Check Details

Version: 1.6.1
Check: R code for possible problems
Result: NOTE
    clusterdist: no visible global function definition for ‘is’
    clusterdist: no visible global function definition for ‘as.dist’
    clusterprob: no visible global function definition for ‘is’
    convert_to_compact_db: no visible global function definition for ‘tail’
    convert_to_compact_db: no visible global function definition for ‘head’
    create_initial_y: no visible binding for global variable ‘median’
    disclapmix: no visible binding for global variable ‘model.matrix’
    disclapmix: no visible global function definition for ‘glm.fit’
    disclapmix: no visible global function definition for ‘glm.control’
    get_rank: no visible global function definition for ‘is’
    haplotype_diversity: no visible global function definition for ‘is’
    haplotype_diversity : get_db_counts: no visible global function
     definition for ‘tail’
    haplotype_diversity : get_db_counts: no visible global function
     definition for ‘head’
    happrobsum: no visible global function definition for ‘is’
    plot.disclapmixfit: no visible global function definition for ‘is’
    plot.disclapmixfit: no visible global function definition for ‘hclust’
    plot.ranked_contrib_pairs: no visible global function definition for
     ‘is’
    plot.ranked_contrib_pairs: no visible global function definition for
     ‘plot’
    predict.disclapmixfit: no visible global function definition for ‘is’
    predict_increase_at_alleles: no visible global function definition for
     ‘is’
    print.contrib_pairs: no visible global function definition for ‘is’
    print.disclapmixfit: no visible global function definition for ‘is’
    print.ranked_contrib_pairs: no visible global function definition for
     ‘is’
    rank_contributor_pairs: no visible global function definition for ‘is’
    simulate.disclapmixfit: no visible global function definition for ‘is’
    summary.disclapmixfit: no visible global function definition for ‘is’
    Undefined global functions or variables:
     as.dist glm.control glm.fit hclust head is median model.matrix plot
     tail
    Consider adding
     importFrom("graphics", "plot")
     importFrom("methods", "is")
     importFrom("stats", "as.dist", "glm.control", "glm.fit", "hclust",
     "median", "model.matrix")
     importFrom("utils", "head", "tail")
    to your NAMESPACE (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64