CRAN Package Check Results for Package disclapmix

Last updated on 2015-07-30 17:47:07.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6.1 13.08 19.81 32.89 NOTE
r-devel-linux-x86_64-debian-gcc 1.6.1 14.39 18.73 33.12 NOTE
r-devel-linux-x86_64-fedora-clang 1.6.1 69.21 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6.1 62.80 NOTE
r-devel-osx-x86_64-clang 1.6.1 56.84 OK
r-devel-windows-ix86+x86_64 1.6.1 70.00 46.00 116.00 NOTE
r-patched-linux-x86_64 1.6.1 14.39 18.66 33.06 OK
r-patched-solaris-sparc 1.6.1 394.90 OK
r-patched-solaris-x86 1.6.1 80.20 OK
r-release-linux-x86_64 1.6.1 14.44 18.74 33.17 OK
r-release-osx-x86_64-mavericks 1.6.1 OK
r-release-windows-ix86+x86_64 1.6.1 71.00 46.00 117.00 OK
r-oldrel-windows-ix86+x86_64 1.6.1 75.00 56.00 131.00 OK

Check Details

Version: 1.6.1
Check: R code for possible problems
Result: NOTE
    clusterdist: no visible global function definition for ‘is’
    clusterdist: no visible global function definition for ‘as.dist’
    clusterprob: no visible global function definition for ‘is’
    convert_to_compact_db: no visible global function definition for ‘tail’
    convert_to_compact_db: no visible global function definition for ‘head’
    create_initial_y: no visible binding for global variable ‘median’
    disclapmix: no visible binding for global variable ‘model.matrix’
    disclapmix: no visible global function definition for ‘glm.fit’
    disclapmix: no visible global function definition for ‘glm.control’
    get_rank: no visible global function definition for ‘is’
    haplotype_diversity: no visible global function definition for ‘is’
    haplotype_diversity : get_db_counts: no visible global function
     definition for ‘tail’
    haplotype_diversity : get_db_counts: no visible global function
     definition for ‘head’
    happrobsum: no visible global function definition for ‘is’
    plot.disclapmixfit: no visible global function definition for ‘is’
    plot.disclapmixfit: no visible global function definition for ‘hclust’
    plot.ranked_contrib_pairs: no visible global function definition for
     ‘is’
    plot.ranked_contrib_pairs: no visible global function definition for
     ‘plot’
    predict.disclapmixfit: no visible global function definition for ‘is’
    predict_increase_at_alleles: no visible global function definition for
     ‘is’
    print.contrib_pairs: no visible global function definition for ‘is’
    print.disclapmixfit: no visible global function definition for ‘is’
    print.ranked_contrib_pairs: no visible global function definition for
     ‘is’
    rank_contributor_pairs: no visible global function definition for ‘is’
    simulate.disclapmixfit: no visible global function definition for ‘is’
    summary.disclapmixfit: no visible global function definition for ‘is’
    Undefined global functions or variables:
     as.dist glm.control glm.fit hclust head is median model.matrix plot
     tail
    Consider adding
     importFrom("graphics", "plot")
     importFrom("methods", "is")
     importFrom("stats", "as.dist", "glm.control", "glm.fit", "hclust",
     "median", "model.matrix")
     importFrom("utils", "head", "tail")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64