Last updated on 2016-10-01 03:47:05.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.9-8 | 33.92 | 68.16 | 102.07 | WARN | |
| r-devel-linux-x86_64-debian-gcc | 0.9-8 | 35.11 | 64.79 | 99.90 | WARN | |
| r-devel-linux-x86_64-fedora-clang | 0.9-8 | 179.39 | WARN | |||
| r-devel-linux-x86_64-fedora-gcc | 0.9-8 | 166.72 | WARN | |||
| r-devel-macos-x86_64-clang | 0.9-8 | 129.86 | WARN | |||
| r-devel-windows-ix86+x86_64 | 0.9-8 | 109.00 | 118.00 | 227.00 | ERROR | |
| r-patched-linux-x86_64 | 0.9-8 | 30.22 | 62.72 | 92.93 | NOTE | |
| r-patched-solaris-sparc | 0.9-8 | 935.20 | NOTE | |||
| r-patched-solaris-x86 | 0.9-8 | 174.40 | NOTE | |||
| r-release-linux-x86_64 | 0.9-8 | 30.18 | 62.21 | 92.38 | NOTE | |
| r-release-osx-x86_64-mavericks | 0.9-8 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 0.9-8 | 104.00 | 122.00 | 226.00 | NOTE | |
| r-oldrel-windows-ix86+x86_64 | 0.9-8 | 182.00 | 168.00 | 350.00 | OK |
Version: 0.9-8
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Warning: GNU Extension: Symbol ‘nz’ is used before it is typed at (1)
Warning: GNU Extension: Nonstandard type declaration REAL*8 at (1)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64
Version: 0.9-8
Check: installed package size
Result: NOTE
installed size is 5.1Mb
sub-directories of 1Mb or more:
libs 4.3Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-osx-x86_64-mavericks
Version: 0.9-8
Check: R code for possible problems
Result: NOTE
plot.dtlik.t: no visible global function definition for ‘matplot’
Undefined global functions or variables:
matplot
Consider adding
importFrom("graphics", "matplot")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64
Version: 0.9-8
Check: running examples for arch ‘i386’
Result: ERROR
Running examples in 'diversitree-Ex.R' failed
The error most likely occurred in:
> ### Name: asr-bisse
> ### Title: Ancestral State Reconstruction Under BiSSE
> ### Aliases: asr.bisse asr.musse asr.marginal.bisse asr.marginal.musse
> ### make.asr.marginal.bisse make.asr.marginal.musse
> ### Keywords: model
>
> ### ** Examples
>
> ## Start with a simple tree evolved under a BiSSE with all rates
> ## asymmetric:
> pars <- c(.1, .2, .03, .06, .01, .02)
> set.seed(3)
> phy <- trees(pars, "bisse", max.taxa=50, max.t=Inf, x0=0)[[1]]
>
> ## Here is the true history
> h <- history.from.sim.discrete(phy, 0:1)
> plot(h, phy, main="True history")
>
> ## BiSSE ancestral state reconstructions under the ML model
> lik <- make.bisse(phy, phy$tip.state)
> fit <- find.mle(lik, pars, method="subplex")
At line 35 of file dcopy.f
Fortran runtime error: Index '2' of dimension 1 of array 'dy' above upper bound of 1
Flavor: r-devel-windows-ix86+x86_64
Version: 0.9-8
Check: running examples for arch ‘x64’
Result: ERROR
Running examples in 'diversitree-Ex.R' failed
The error most likely occurred in:
> ### Name: asr-bisse
> ### Title: Ancestral State Reconstruction Under BiSSE
> ### Aliases: asr.bisse asr.musse asr.marginal.bisse asr.marginal.musse
> ### make.asr.marginal.bisse make.asr.marginal.musse
> ### Keywords: model
>
> ### ** Examples
>
> ## Start with a simple tree evolved under a BiSSE with all rates
> ## asymmetric:
> pars <- c(.1, .2, .03, .06, .01, .02)
> set.seed(3)
> phy <- trees(pars, "bisse", max.taxa=50, max.t=Inf, x0=0)[[1]]
>
> ## Here is the true history
> h <- history.from.sim.discrete(phy, 0:1)
> plot(h, phy, main="True history")
>
> ## BiSSE ancestral state reconstructions under the ML model
> lik <- make.bisse(phy, phy$tip.state)
> fit <- find.mle(lik, pars, method="subplex")
At line 35 of file dcopy.f
Fortran runtime error: Index '2' of dimension 1 of array 'dy' above upper bound of 1
Flavor: r-devel-windows-ix86+x86_64