CRAN Package Check Results for Package doBy

Last updated on 2015-07-31 06:46:52.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.5-13 3.58 57.56 61.15 NOTE
r-devel-linux-x86_64-debian-gcc 4.5-13 4.80 56.22 61.03 NOTE
r-devel-linux-x86_64-fedora-clang 4.5-13 125.63 NOTE
r-devel-linux-x86_64-fedora-gcc 4.5-13 117.23 NOTE
r-devel-osx-x86_64-clang 4.5-13 112.96 NOTE
r-devel-windows-ix86+x86_64 4.5-13 15.00 95.00 110.00 NOTE
r-patched-linux-x86_64 4.5-13 3.31 58.24 61.55 NOTE
r-patched-solaris-sparc 4.5-13 746.10 NOTE
r-patched-solaris-x86 4.5-13 160.20 NOTE
r-release-linux-x86_64 4.5-13 3.90 57.58 61.48 NOTE
r-release-osx-x86_64-mavericks 4.5-13 NOTE
r-release-windows-ix86+x86_64 4.5-13 12.00 89.00 101.00 NOTE
r-oldrel-windows-ix86+x86_64 4.5-13 12.00 114.00 126.00 NOTE

Check Details

Version: 4.5-13
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘pbkrtest’ in package code.
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 4.5-13
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     LSmatrix.default LSmeans.default LSmeans.lmerMod coef.lmBy
     coef.summary.lmBy esticon.coxph esticon.geeglm esticon.glm
     esticon.gls esticon.lm esticon.lme esticon.mer esticon.merMod
     firstobs.default firstobs.formula fitted.lmBy lastobs.default
     lastobs.formula linest.geeglm linest.glm linest.lm linest.lmerMod
     linest.merMod nullBasis.Matrix nullBasis.geeglm nullBasis.glm
     nullBasis.lm nullBasis.lmerMod nullBasis.matrix print.LSmatrix
     print.linearEstimate print.lmBy print.splitByData print.summary.lmBy
     residuals.lmBy summary.lmBy
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 4.5-13
Check: R code for possible problems
Result: NOTE
    .esticonCore: no visible global function definition for ‘pt’
    .esticonCore: no visible global function definition for ‘pchisq’
    .esticonCore: no visible global function definition for ‘qt’
    .esticonCore: no visible global function definition for ‘qnorm’
    .getX.default: no visible global function definition for ‘terms’
    .getX.default: no visible global function definition for
     ‘delete.response’
    .getX.default: no visible global function definition for ‘model.frame’
    .getX.default: no visible global function definition for ‘model.matrix’
    .getX.merMod: no visible global function definition for ‘terms’
    .getX.merMod: no visible global function definition for
     ‘delete.response’
    .getX.merMod: no visible global function definition for ‘model.frame’
    .getX.merMod: no visible global function definition for ‘model.matrix’
    .get_contrasts.merMod: no visible global function definition for
     ‘model.matrix’
    .get_covariate_ave: no visible global function definition for ‘terms’
    .get_covariate_ave: no visible global function definition for
     ‘model.frame’
    .get_covariate_ave: no visible global function definition for
     ‘delete.response’
    .get_linest_list: no visible global function definition for
     ‘delete.response’
    .get_linest_list: no visible global function definition for ‘terms’
    .get_null_basis: no visible global function definition for
     ‘model.matrix’
    .get_vartypes: no visible global function definition for ‘terms’
    .get_vartypes: no visible global function definition for ‘model.frame’
    .get_vartypes: no visible global function definition for
     ‘delete.response’
    .get_xlevels.mer: no visible global function definition for ‘terms’
    .get_xlevels.merMod: no visible global function definition for ‘terms’
    .wald: no visible global function definition for ‘vcov’
    .wald: no visible global function definition for ‘coef’
    .wald: no visible global function definition for ‘summary.lm’
    .wald: no visible global function definition for ‘pchisq’
    coef.lmBy: no visible binding for global variable ‘coef’
    coef.summary.lmBy: no visible binding for global variable ‘coef’
    descStat: no visible global function definition for ‘sd’
    descStat: no visible global function definition for ‘median’
    doby.xtabs: no visible global function definition for ‘terms’
    esticon.glm: no visible global function definition for ‘summary.lm’
    esticon.glm: no visible global function definition for ‘family’
    esticon.gls: no visible global function definition for ‘vcov’
    esticon.gls: no visible global function definition for ‘coef’
    esticon.lm: no visible global function definition for ‘summary.lm’
    esticon.lm: no visible global function definition for ‘coef’
    esticon.mer: no visible global function definition for ‘vcov’
    esticon.merMod: no visible global function definition for ‘vcov’
    fitted.lmBy: no visible binding for global variable ‘fitted’
    linest.geeglm: no visible global function definition for ‘coef’
    linest.geeglm: no visible global function definition for ‘pnorm’
    linest.geeglm: no visible global function definition for ‘qnorm’
    linest.geeglm: no visible global function definition for ‘family’
    linest.glm: no visible global function definition for ‘coef’
    linest.glm: no visible global function definition for ‘vcov’
    linest.glm: no visible global function definition for ‘family’
    linest.glm: no visible global function definition for ‘pnorm’
    linest.glm: no visible global function definition for ‘qnorm’
    linest.glm: no visible global function definition for ‘pt’
    linest.glm: no visible global function definition for ‘qt’
    linest.lm: no visible global function definition for ‘coef’
    linest.lm: no visible global function definition for ‘vcov’
    linest.lm: no visible global function definition for ‘pt’
    linest.lm: no visible global function definition for ‘qt’
    linest.lmerMod: no visible global function definition for ‘vcov’
    linest.lmerMod: no visible global function definition for ‘logLik’
    linest.lmerMod: no visible global function definition for ‘pt’
    linest.lmerMod: no visible global function definition for ‘qt’
    lmBy : <anonymous>: no visible global function definition for ‘lm’
    nullBasis.geeglm: no visible global function definition for
     ‘model.matrix’
    nullBasis.glm: no visible global function definition for ‘model.matrix’
    nullBasis.lm: no visible global function definition for ‘model.matrix’
    nullBasis.lmerMod: no visible global function definition for
     ‘model.matrix’
    parseGroupFormula: no visible global function definition for
     ‘as.formula’
    residuals.lmBy: no visible binding for global variable ‘residuals’
    summaryBy: no visible global function definition for ‘as.formula’
    Undefined global functions or variables:
     as.formula coef delete.response family fitted lm logLik median
     model.frame model.matrix pchisq pnorm pt qnorm qt residuals sd
     summary.lm terms vcov
    Consider adding
     importFrom("stats", "as.formula", "coef", "delete.response", "family",
     "fitted", "lm", "logLik", "median", "model.frame",
     "model.matrix", "pchisq", "pnorm", "pt", "qnorm", "qt",
     "residuals", "sd", "summary.lm", "terms", "vcov")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64