CRAN Package Check Results for Package doBy

Last updated on 2014-04-25 05:47:14.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.5-10 5.57 76.27 81.84 OK
r-devel-linux-x86_64-debian-gcc 4.5-10 5.50 76.82 82.32 OK
r-devel-linux-x86_64-fedora-clang 4.5-10 193.99 OK
r-devel-linux-x86_64-fedora-gcc 4.5-10 185.35 OK
r-devel-osx-x86_64-clang 4.5-10 150.71 OK
r-devel-osx-x86_64-gcc 4.5-10 WARN
r-devel-windows-ix86+x86_64 4.5-10 12.00 103.00 115.00 OK
r-patched-linux-x86_64 4.5-10 5.58 75.87 81.45 OK
r-patched-solaris-sparc 4.5-10 978.40 OK
r-patched-solaris-x86 4.5-10 231.40 OK
r-release-linux-ix86 4.5-10 8.00 123.00 131.00 OK
r-release-linux-x86_64 4.5-10 5.59 76.10 81.69 OK
r-release-osx-x86_64-mavericks 4.5-10 WARN
r-release-osx-x86_64-snowleopard 4.5-10 ERROR
r-release-windows-ix86+x86_64 4.5-10 13.00 114.00 127.00 OK
r-oldrel-windows-ix86+x86_64 4.5-10 13.00 101.00 114.00 OK

Check Details

Version: 4.5-10
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     ‘pbkrtest’ ‘ggplot2’ ‘multcomp’
Flavor: r-devel-osx-x86_64-gcc

Version: 4.5-10
Check: R code for possible problems
Result: NOTE
    linest.lmerMod: no visible global function definition for ‘vcovAdj’
    linest.lmerMod : <anonymous>: no visible global function definition for
     ‘ddf_Lb’
Flavor: r-devel-osx-x86_64-gcc

Version: 4.5-10
Check: running R code from vignettes
Result: WARNING
    Errors in running code in vignettes:
    when running code in ‘LSmeans.Rnw’
     ...
    > warp.mm <- lmer(breaks ~ tension + (1 | wool), data = warpbreaks)
    
    > LSmeans(warp.mm, effect = "tension")
    Loading required package: pbkrtest
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘pbkrtest’
    
     When sourcing ‘LSmeans.R’:
    Error: adjustment of degrees of freedom requires that 'pbkrtest' is installed
    Execution halted
Flavor: r-devel-osx-x86_64-gcc

Version: 4.5-10
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: doBy
    Loading required package: survival
    Loading required package: splines
    Loading required package: MASS
    Warning: file name ‘figures/LSmeans-007’ is not portable
    Loading required package: Matrix
    Loading required package: Rcpp
    Loading required package: pbkrtest
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘pbkrtest’
    
    Error: processing vignette 'LSmeans.Rnw' failed with diagnostics:
     chunk 21
    Error in linest.lmerMod(object, K, level = level, adjust.df = adjust.df, :
     adjustment of degrees of freedom requires that 'pbkrtest' is installed
    Execution halted
Flavor: r-devel-osx-x86_64-gcc

Version: 4.5-10
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘multcomp’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 4.5-10
Check: running R code from vignettes
Result: WARNING
    Errors in running code in vignettes:
    when running code in ‘LSmeans.Rnw’
     ...
    > summaryBy(y ~ treat, data = simdat)
     treat y.mean
    1 t1 1.5
    2 t2 4.5
    
    > library("multcomp")
    
     When sourcing ‘LSmeans.R’:
    Error: there is no package called ‘multcomp’
    Execution halted
Flavor: r-release-osx-x86_64-mavericks

Version: 4.5-10
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: doBy
    Loading required package: survival
    Loading required package: splines
    Loading required package: MASS
    Loading required package: Matrix
    Loading required package: Rcpp
    Loading required package: pbkrtest
    Loading required package: parallel
    
    Error: processing vignette 'LSmeans.Rnw' failed with diagnostics:
     chunk 48
    Error in library("multcomp") : there is no package called ‘multcomp’
    Execution halted
Flavor: r-release-osx-x86_64-mavericks

Version: 4.5-10
Check: whether package can be installed
Result: ERROR
    Installation failed.
    See ‘/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/doBy.Rcheck/00install.out’ for details.
Flavor: r-release-osx-x86_64-snowleopard