CRAN Package Check Results for Package epiR

Last updated on 2015-07-30 21:47:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9-62 1.12 28.12 29.24 NOTE
r-devel-linux-x86_64-debian-gcc 0.9-62 1.10 29.77 30.87 NOTE
r-devel-linux-x86_64-fedora-clang 0.9-62 56.71 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9-62 50.91 NOTE
r-devel-osx-x86_64-clang 0.9-62 46.65 NOTE
r-devel-windows-ix86+x86_64 0.9-62 8.00 43.00 51.00 NOTE
r-patched-linux-x86_64 0.9-62 1.10 28.90 30.00 NOTE
r-patched-solaris-sparc 0.9-62 357.30 NOTE
r-patched-solaris-x86 0.9-62 67.90 NOTE
r-release-linux-x86_64 0.9-62 1.24 28.38 29.61 NOTE
r-release-osx-x86_64-mavericks 0.9-62 OK
r-release-windows-ix86+x86_64 0.9-62 9.00 68.00 77.00 OK
r-oldrel-windows-ix86+x86_64 0.9-62 7.00 71.00 78.00 OK

Check Details

Version: 0.9-62
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     print.epi.occc
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.9-62
Check: R code for possible problems
Result: NOTE
    .acceptbin: no visible global function definition for ‘pbinom’
    .acceptbin: no visible global function definition for ‘qbinom’
    .bin.conf : bc: no visible global function definition for ‘qf’
    .bin.conf : bc: no visible global function definition for ‘qnorm’
    .blakerci: no visible global function definition for ‘qbeta’
    .sterne.int : Feta: no visible global function definition for ‘pbinom’
    epi.2by2 : .funincrisk: no visible global function definition for ‘qf’
    epi.2by2 : .funincrate: no visible global function definition for
     ‘qchisq’
    epi.2by2: no visible global function definition for ‘qnorm’
    epi.2by2: no visible global function definition for ‘qbinom’
    epi.2by2: no visible global function definition for ‘qf’
    epi.2by2: no visible global function definition for ‘fisher.test’
    epi.2by2: no visible global function definition for ‘pchisq’
    epi.2by2: no visible global function definition for ‘mantelhaen.test’
    epi.about: no visible global function definition for
     ‘packageDescription’
    epi.asc: no visible global function definition for ‘write.table’
    epi.betabuster: no visible global function definition for ‘pbeta’
    epi.betabuster: no visible global function definition for ‘qbeta’
    epi.bohning: no visible global function definition for ‘pnorm’
    epi.ccc: no visible global function definition for ‘complete.cases’
    epi.ccc: no visible global function definition for ‘qnorm’
    epi.ccc: no visible global function definition for ‘var’
    epi.ccc: no visible global function definition for ‘sd’
    epi.ccc: no visible global function definition for ‘cor’
    epi.cluster1size: no visible global function definition for ‘qnorm’
    epi.cluster2size: no visible global function definition for ‘qnorm’
    epi.clustersize: no visible global function definition for ‘qnorm’
    epi.conf: no visible global function definition for ‘qnorm’
    epi.conf: no visible global function definition for ‘qt’
    epi.conf: no visible global function definition for ‘qf’
    epi.conf: no visible global function definition for ‘qchisq’
    epi.conf: no visible global function definition for ‘qbinom’
    epi.cp: no visible global function definition for ‘hist’
    epi.cpresids: no visible global function definition for ‘model.matrix’
    epi.cpresids: no visible global function definition for ‘sd’
    epi.dgamma: no visible global function definition for ‘qnorm’
    epi.directadj: no visible global function definition for ‘qnorm’
    epi.directadj: no visible global function definition for ‘qchisq’
    epi.directadj: no visible global function definition for ‘qgamma’
    epi.dsl: no visible global function definition for ‘qnorm’
    epi.dsl: no visible global function definition for ‘pchisq’
    epi.dsl: no visible global function definition for ‘pnorm’
    epi.edr: no visible global function definition for ‘qnorm’
    epi.edr: no visible global function definition for ‘sd’
    epi.edr: no visible global function definition for ‘rpois’
    epi.edr : quant: no visible global function definition for ‘quantile’
    epi.herdtest: no visible global function definition for ‘phyper’
    epi.indirectadj: no visible global function definition for ‘qnorm’
    epi.indirectadj: no visible global function definition for ‘qchisq’
    epi.indirectadj: no visible global function definition for ‘qpois’
    epi.insthaz: no visible global function definition for ‘qnorm’
    epi.interaction: no visible global function definition for ‘qnorm’
    epi.interaction: no visible global function definition for ‘vcov’
    epi.iv: no visible global function definition for ‘qnorm’
    epi.iv: no visible global function definition for ‘pchisq’
    epi.iv: no visible global function definition for ‘pnorm’
    epi.kappa: no visible global function definition for ‘qnorm’
    epi.kappa : .funincrisk: no visible global function definition for ‘qf’
    epi.kappa: no visible global function definition for ‘pnorm’
    epi.kappa: no visible global function definition for ‘pchisq’
    epi.mh: no visible global function definition for ‘qnorm’
    epi.mh: no visible global function definition for ‘pchisq’
    epi.mh: no visible global function definition for ‘pnorm’
    epi.occc: no visible binding for global variable ‘sd’
    epi.occc: no visible global function definition for ‘cov’
    epi.popsize: no visible global function definition for ‘qnorm’
    epi.prcc: no visible global function definition for ‘pt’
    epi.simplesize: no visible global function definition for ‘qnorm’
    epi.smd: no visible global function definition for ‘qnorm’
    epi.smd: no visible global function definition for ‘pchisq’
    epi.stratasize: no visible global function definition for ‘qnorm’
    epi.studysize: no visible global function definition for ‘qnorm’
    epi.studysize: no visible global function definition for ‘pnorm’
    epi.tests: no visible global function definition for ‘qnorm’
    epi.tests : .funincrisk: no visible global function definition for ‘qf’
    Undefined global functions or variables:
     complete.cases cor cov fisher.test hist mantelhaen.test model.matrix
     packageDescription pbeta pbinom pchisq phyper pnorm pt qbeta qbinom
     qchisq qf qgamma qnorm qpois qt quantile rpois sd var vcov
     write.table
    Consider adding
     importFrom("graphics", "hist")
     importFrom("stats", "complete.cases", "cor", "cov", "fisher.test",
     "mantelhaen.test", "model.matrix", "pbeta", "pbinom",
     "pchisq", "phyper", "pnorm", "pt", "qbeta", "qbinom",
     "qchisq", "qf", "qgamma", "qnorm", "qpois", "qt",
     "quantile", "rpois", "sd", "var", "vcov")
     importFrom("utils", "packageDescription", "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64