CRAN Package Check Results for Package epoc

Last updated on 2015-08-01 10:46:52.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.5-1 3.70 43.58 47.27 NOTE
r-devel-linux-x86_64-debian-gcc 0.2.5-1 4.68 42.26 46.95 NOTE
r-devel-linux-x86_64-fedora-clang 0.2.5-1 100.41 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.5-1 89.69 NOTE
r-devel-osx-x86_64-clang 0.2.5-1 77.98 NOTE
r-devel-windows-ix86+x86_64 0.2.5-1 15.00 90.00 105.00 NOTE
r-patched-linux-x86_64 0.2.5-1 3.65 41.96 45.61 NOTE
r-patched-solaris-sparc 0.2.5-1 587.80 NOTE
r-patched-solaris-x86 0.2.5-1 127.80 NOTE
r-release-linux-x86_64 0.2.5-1 3.65 41.87 45.52 NOTE
r-release-osx-x86_64-mavericks 0.2.5-1 NOTE
r-release-windows-ix86+x86_64 0.2.5-1 14.00 102.00 116.00 OK
r-oldrel-windows-ix86+x86_64 0.2.5-1 20.00 88.00 108.00 OK

Check Details

Version: 0.2.5-1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.bootsize
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.2.5-1
Check: R code for possible problems
Result: NOTE
    as.graph.EPOCA: no visible global function definition for ‘coef’
    as.graph.EPOCG: no visible global function definition for ‘coef’
    epoc: no visible global function definition for ‘cor’
    epoc.bootplot: no visible global function definition for ‘coef’
    epoc.bootplot: no visible global function definition for ‘title’
    epoc.svd: no visible global function definition for ‘coef’
    epoc.validation: no visible global function definition for ‘predict’
    epoc.validation: no visible global function definition for ‘coef’
    findoptimvalid: no visible global function definition for ‘loess’
    findoptimvalid: no visible global function definition for ‘predict’
    findoptimvalid.pred: no visible global function definition for ‘loess’
    findoptimvalid.pred: no visible global function definition for
     ‘predict’
    modelselPlot: no visible global function definition for ‘lines’
    modelselPlot: no visible global function definition for ‘axis’
    modelselPlot: no visible global function definition for ‘abline’
    modelselPlot: no visible global function definition for ‘text’
    modelselPlot: no visible global function definition for ‘legend’
    modelselPlot: no visible global function definition for ‘quantile’
    plot.EPOCA: no visible global function definition for ‘coef’
    plot.EPOCA: no visible global function definition for ‘title’
    plot.EPOCBOOT1: no visible global function definition for ‘coef’
    plot.EPOCBOOT1: no visible global function definition for ‘title’
    plot.EPOCG: no visible global function definition for ‘coef’
    plot.EPOCG: no visible global function definition for ‘title’
    plot.EPoC.survival: no visible global function definition for ‘par’
    plot.EPoC.validation.W: no visible global function definition for
     ‘lines’
    plot.EPoC.validation.W: no visible global function definition for
     ‘abline’
    plot.EPoC.validation.W: no visible global function definition for
     ‘points’
    plot.EPoC.validation.W: no visible global function definition for
     ‘axis’
    plot.EPoC.validation.W: no visible global function definition for
     ‘text’
    plot.EPoC.validation.W: no visible global function definition for
     ‘quantile’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘abline’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘lines’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘points’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘axis’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘text’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘quantile’
    plot.bootsize: no visible global function definition for ‘lines’
    plot.bootsize: no visible global function definition for ‘legend’
    predict.EPOCA: no visible global function definition for ‘coef’
    predict.EPOCG: no visible global function definition for ‘coef’
    print.EPOCA: no visible global function definition for ‘coef’
    print.EPOCG: no visible global function definition for ‘coef’
    reg: no visible global function definition for ‘coef’
    reg: no visible global function definition for ‘lsfit’
    summary.EPOCA: no visible global function definition for ‘coef’
    summary.EPOCG: no visible global function definition for ‘coef’
    write.sif: no visible global function definition for ‘coef’
    Undefined global functions or variables:
     abline axis coef cor legend lines loess lsfit par points predict
     quantile text title
    Consider adding
     importFrom("graphics", "abline", "axis", "legend", "lines", "par",
     "points", "text", "title")
     importFrom("stats", "coef", "cor", "loess", "lsfit", "predict",
     "quantile")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.2.5-1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘RCytoscape’
Flavors: r-devel-osx-x86_64-clang, r-patched-solaris-sparc, r-release-osx-x86_64-mavericks