CRAN Package Check Results for Package epoc

Last updated on 2015-06-30 19:47:44.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.5-1 3.60 44.38 47.98 NOTE
r-devel-linux-x86_64-debian-gcc 0.2.5-1 4.49 41.95 46.44 NOTE
r-devel-linux-x86_64-fedora-clang 0.2.5-1 94.87 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.5-1 88.93 NOTE
r-devel-osx-x86_64-clang 0.2.5-1 85.10 NOTE
r-devel-windows-ix86+x86_64 0.2.5-1 15.00 99.00 114.00 NOTE
r-patched-linux-x86_64 0.2.5-1 3.66 42.14 45.80 NOTE
r-patched-solaris-sparc 0.2.5-1 576.90 NOTE
r-patched-solaris-x86 0.2.5-1 128.40 NOTE
r-release-linux-x86_64 0.2.5-1 3.44 41.72 45.17 NOTE
r-release-osx-x86_64-mavericks 0.2.5-1 NOTE
r-release-windows-ix86+x86_64 0.2.5-1 14.00 66.00 80.00 OK
r-oldrel-windows-ix86+x86_64 0.2.5-1 16.00 111.00 127.00 OK

Check Details

Version: 0.2.5-1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.bootsize
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.2.5-1
Check: R code for possible problems
Result: NOTE
    as.graph.EPOCA: no visible global function definition for ‘coef’
    as.graph.EPOCG: no visible global function definition for ‘coef’
    epoc: no visible global function definition for ‘cor’
    epoc.bootplot: no visible global function definition for ‘coef’
    epoc.bootplot: no visible global function definition for ‘title’
    epoc.svd: no visible global function definition for ‘coef’
    epoc.validation: no visible global function definition for ‘predict’
    epoc.validation: no visible global function definition for ‘coef’
    findoptimvalid: no visible global function definition for ‘loess’
    findoptimvalid: no visible global function definition for ‘predict’
    findoptimvalid.pred: no visible global function definition for ‘loess’
    findoptimvalid.pred: no visible global function definition for
     ‘predict’
    modelselPlot: no visible global function definition for ‘lines’
    modelselPlot: no visible global function definition for ‘axis’
    modelselPlot: no visible global function definition for ‘abline’
    modelselPlot: no visible global function definition for ‘text’
    modelselPlot: no visible global function definition for ‘legend’
    modelselPlot: no visible global function definition for ‘quantile’
    plot.EPOCA: no visible global function definition for ‘coef’
    plot.EPOCA: no visible global function definition for ‘title’
    plot.EPOCBOOT1: no visible global function definition for ‘coef’
    plot.EPOCBOOT1: no visible global function definition for ‘title’
    plot.EPOCG: no visible global function definition for ‘coef’
    plot.EPOCG: no visible global function definition for ‘title’
    plot.EPoC.survival: no visible global function definition for ‘par’
    plot.EPoC.validation.W: no visible global function definition for
     ‘lines’
    plot.EPoC.validation.W: no visible global function definition for
     ‘abline’
    plot.EPoC.validation.W: no visible global function definition for
     ‘points’
    plot.EPoC.validation.W: no visible global function definition for
     ‘axis’
    plot.EPoC.validation.W: no visible global function definition for
     ‘text’
    plot.EPoC.validation.W: no visible global function definition for
     ‘quantile’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘abline’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘lines’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘points’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘axis’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘text’
    plot.EPoC.validation.pred: no visible global function definition for
     ‘quantile’
    plot.bootsize: no visible global function definition for ‘lines’
    plot.bootsize: no visible global function definition for ‘legend’
    predict.EPOCA: no visible global function definition for ‘coef’
    predict.EPOCG: no visible global function definition for ‘coef’
    print.EPOCA: no visible global function definition for ‘coef’
    print.EPOCG: no visible global function definition for ‘coef’
    reg: no visible global function definition for ‘coef’
    reg: no visible global function definition for ‘lsfit’
    summary.EPOCA: no visible global function definition for ‘coef’
    summary.EPOCG: no visible global function definition for ‘coef’
    write.sif: no visible global function definition for ‘coef’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64

Version: 0.2.5-1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘RCytoscape’
Flavors: r-devel-osx-x86_64-clang, r-patched-solaris-sparc, r-release-osx-x86_64-mavericks