CRAN Package Check Results for Package expands

Last updated on 2015-08-02 21:47:02.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.5 2.60 165.19 167.79 NOTE
r-devel-linux-x86_64-debian-gcc 1.5 2.66 165.19 167.85 NOTE
r-devel-linux-x86_64-fedora-clang 1.5 339.70 NOTE
r-devel-linux-x86_64-fedora-gcc 1.5 309.44 NOTE
r-devel-osx-x86_64-clang 1.5 254.80 OK
r-devel-windows-ix86+x86_64 1.5 8.00 288.00 296.00 NOTE
r-patched-linux-x86_64 1.5 3.33 165.60 168.92 OK
r-patched-solaris-sparc 1.5 457.30 OK --no-vignettes
r-patched-solaris-x86 1.5 368.80 OK
r-release-linux-x86_64 1.5 2.66 179.00 181.66 OK
r-release-osx-x86_64-mavericks 1.5 OK
r-release-windows-ix86+x86_64 1.5 12.00 275.00 287.00 OK
r-oldrel-windows-ix86+x86_64 1.5 16.00 314.00 330.00 OK

Check Details

Version: 1.5
Check: R code for possible problems
Result: NOTE
    .plotSPPerChr: no visible global function definition for ‘rainbow’
    .plotSPPerChr: no visible global function definition for ‘matpoints’
    assignQuantityToSP: no visible global function definition for ‘median’
    buildMultiSamplePhylo: no visible global function definition for
     ‘read.table’
    buildMultiSamplePhylo: no visible global function definition for
     ‘colorRampPalette’
    buildPhylo: no visible global function definition for ‘write.table’
    clusterCellFrequencies: no visible global function definition for
     ‘hclust’
    clusterCellFrequencies: no visible global function definition for
     ‘as.dist’
    clusterCellFrequencies: no visible global function definition for
     ‘cutree’
    clusterCellFrequencies: no visible global function definition for
     ‘kmeans’
    clusterCellFrequencies: no visible global function definition for
     ‘wilcox.test’
    plotSPs: no visible global function definition for ‘par’
    plotSPs: no visible global function definition for ‘axis’
    plotSPs: no visible global function definition for ‘gray.colors’
    plotSPs: no visible global function definition for ‘matpoints’
    plotSPs: no visible global function definition for ‘legend’
    plotSPs: no visible global function definition for ‘lines’
    runExPANdS: no visible global function definition for ‘read.table’
    runExPANdS: no visible global function definition for ‘quantile’
    runExPANdS: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     as.dist axis colorRampPalette cutree gray.colors hclust kmeans legend
     lines matpoints median par quantile rainbow read.table wilcox.test
     write.table
    Consider adding
     importFrom("grDevices", "colorRampPalette", "gray.colors", "rainbow")
     importFrom("graphics", "axis", "legend", "lines", "matpoints", "par")
     importFrom("stats", "as.dist", "cutree", "hclust", "kmeans", "median",
     "quantile", "wilcox.test")
     importFrom("utils", "read.table", "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64