CRAN Package Check Results for Package fMultivar

Last updated on 2017-01-21 23:51:39.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3011.78 1.86 40.23 42.09 NOTE
r-devel-linux-x86_64-debian-gcc 3011.78 1.87 39.79 41.65 NOTE
r-devel-linux-x86_64-fedora-clang 3011.78 79.19 NOTE --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 3011.78 85.59 NOTE --no-stop-on-test-error
r-devel-macos-x86_64-clang 3011.78 61.88 NOTE --no-stop-on-test-error
r-devel-windows-ix86+x86_64 3011.78 9.00 98.00 107.00 NOTE
r-patched-linux-x86_64 3011.78 1.79 36.10 37.89 NOTE
r-patched-solaris-sparc 3011.78 469.50 NOTE
r-patched-solaris-x86 3011.78 85.90 ERROR
r-release-linux-x86_64 3011.78 1.90 36.53 38.43 NOTE
r-release-osx-x86_64-mavericks 3011.78 NOTE
r-release-windows-ix86+x86_64 3011.78 13.00 70.00 83.00 NOTE
r-oldrel-windows-ix86+x86_64 3011.78 15.00 98.00 113.00 NOTE

Check Details

Version: 3011.78
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 3011.78
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     contour.gridData persp.gridData plot.hexBinning plot.squareBinning
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 3011.78
Check: R code for possible problems
Result: NOTE
    .TOwen: no visible global function definition for ‘pnorm’
    .delliptical2dSlider: no visible global function definition for ‘par’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘image’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘heat.colors’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘contour’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘title’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘par’
    .dnorm2d: no visible global function definition for ‘mahalanobis’
    .mnFit: no visible global function definition for ‘cov’
    .mnFit: no visible global function definition for ‘new’
    .pnorm2d: no visible global function definition for ‘pnorm’
    .rnorm2d: no visible global function definition for ‘rnorm’
    contour.gridData: no visible global function definition for ‘image’
    contour.gridData: no visible global function definition for ‘contour’
    contour.gridData: no visible global function definition for ‘box’
    density2d : .bandwidth.nrd: no visible global function definition for
     ‘var’
    density2d: no visible global function definition for ‘dnorm’
    mscFit: no visible global function definition for ‘new’
    msnFit: no visible global function definition for ‘new’
    mstFit: no visible global function definition for ‘new’
    persp.gridData: no visible global function definition for ‘persp’
    plot.hexBinning: no visible global function definition for
     ‘heat.colors’
    plot.hexBinning: no visible global function definition for ‘polygon’
    plot.hexBinning: no visible global function definition for ‘rug’
    plot.squareBinning: no visible global function definition for
     ‘heat.colors’
    plot.squareBinning: no visible global function definition for ‘polygon’
    plot.squareBinning: no visible global function definition for ‘rug’
    rnorm2d: no visible global function definition for ‘rnorm’
    rt2d: no visible global function definition for ‘rchisq’
    Undefined global functions or variables:
     box contour cov dnorm heat.colors image mahalanobis new par persp
     pnorm polygon rchisq rnorm rug title var
    Consider adding
     importFrom("grDevices", "heat.colors")
     importFrom("graphics", "box", "contour", "image", "par", "persp",
     "polygon", "rug", "title")
     importFrom("methods", "new")
     importFrom("stats", "cov", "dnorm", "mahalanobis", "pnorm", "rchisq",
     "rnorm", "var")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 3011.78
Check: line endings in Makefiles
Result: NOTE
    Found the following Makefile(s) without a final LF:
     inst/unitTests/Makefile
    Some ‘make’ programs ignore lines not ending in LF.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 3011.78
Flags: --no-stop-on-test-error
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 3011.78
Flags: --no-stop-on-test-error
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     contour.gridData persp.gridData plot.hexBinning plot.squareBinning
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 3011.78
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    .TOwen: no visible global function definition for ‘pnorm’
    .delliptical2dSlider: no visible global function definition for ‘par’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘image’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘heat.colors’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘contour’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘title’
    .delliptical2dSlider : refresh.code: no visible global function
     definition for ‘par’
    .dnorm2d: no visible global function definition for ‘mahalanobis’
    .mnFit: no visible global function definition for ‘cov’
    .mnFit: no visible global function definition for ‘new’
    .pnorm2d: no visible global function definition for ‘pnorm’
    .rnorm2d: no visible global function definition for ‘rnorm’
    contour.gridData: no visible global function definition for ‘image’
    contour.gridData: no visible global function definition for ‘contour’
    contour.gridData: no visible global function definition for ‘box’
    density2d : .bandwidth.nrd: no visible global function definition for
     ‘var’
    density2d: no visible global function definition for ‘dnorm’
    mscFit: no visible global function definition for ‘new’
    msnFit: no visible global function definition for ‘new’
    mstFit: no visible global function definition for ‘new’
    persp.gridData: no visible global function definition for ‘persp’
    plot.hexBinning: no visible global function definition for
     ‘heat.colors’
    plot.hexBinning: no visible global function definition for ‘polygon’
    plot.hexBinning: no visible global function definition for ‘rug’
    plot.squareBinning: no visible global function definition for
     ‘heat.colors’
    plot.squareBinning: no visible global function definition for ‘polygon’
    plot.squareBinning: no visible global function definition for ‘rug’
    rnorm2d: no visible global function definition for ‘rnorm’
    rt2d: no visible global function definition for ‘rchisq’
    Undefined global functions or variables:
     box contour cov dnorm heat.colors image mahalanobis new par persp
     pnorm polygon rchisq rnorm rug title var
    Consider adding
     importFrom("grDevices", "heat.colors")
     importFrom("graphics", "box", "contour", "image", "par", "persp",
     "polygon", "rug", "title")
     importFrom("methods", "new")
     importFrom("stats", "cov", "dnorm", "mahalanobis", "pnorm", "rchisq",
     "rnorm", "var")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 3011.78
Flags: --no-stop-on-test-error
Check: line endings in Makefiles
Result: NOTE
    Found the following Makefile(s) without a final LF:
     inst/unitTests/Makefile
    Some ‘make’ programs ignore lines not ending in LF.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 3011.78
Check: tests
Result: ERROR
     Running ‘doRUnit.R’
    Running the tests in ‘tests/doRUnit.R’ failed.
    Complete output:
     > #### doRUnit.R --- Run RUnit tests
     > ####------------------------------------------------------------------------
     >
     > ### Origianlly follows Gregor Gojanc's example in CRAN package 'gdata'
     > ### and the corresponding section in the R Wiki:
     > ### http://wiki.r-project.org/rwiki/doku.php?id=developers:runit
     >
     > ### MM: Vastly changed: This should also be "runnable" for *installed*
     > ## package which has no ./tests/
     > ## ----> put the bulk of the code e.g. in ../inst/unitTests/runTests.R :
     >
     > if(require("RUnit", quietly = TRUE)) {
     +
     + ## --- Setup ---
     +
     + wd <- getwd()
     + pkg <- sub("\\.Rcheck$", '', basename(dirname(wd)))
     +
     + library(package=pkg, character.only = TRUE)
     +
     + path <- system.file("unitTests", package = pkg)
     +
     + stopifnot(file.exists(path), file.info(path.expand(path))$isdir)
     +
     + source(file.path(path, "runTests.R"), echo = TRUE)
     + }
     Loading required package: timeDate
     Loading required package: timeSeries
     Loading required package: fBasics
    
    
     Rmetrics Package fBasics
     Analysing Markets and calculating Basic Statistics
     Copyright (C) 2005-2014 Rmetrics Association Zurich
     Educational Software for Financial Engineering and Computational Science
     Rmetrics is free software and comes with ABSOLUTELY NO WARRANTY.
     https://www.rmetrics.org --- Mail to: info@rmetrics.org
    
    
     Rmetrics Package fMultivar
     Analysing and Modeling Multivariate Financial Return Distributions
     Copyright (C) 2005-2014 Rmetrics Association Zurich
     Educational Software for Financial Engineering and Computational Science
     Rmetrics is free software and comes with ABSOLUTELY NO WARRANTY.
     https://www.rmetrics.org --- Mail to: info@rmetrics.org
    
     > pkg <- "fMultivar"
    
     > if (require("RUnit", quietly = TRUE)) {
     + library(package = pkg, character.only = TRUE)
     + if (!(exists("path") && file.exists(path)))
     + .... [TRUNCATED]
    
    
     Executing test function test.hexBinning ... done successfully.
    
    
    
     Executing test function test.squareBinning ... done successfully.
    
    
    
     Executing test function test.cauchy2d ... done successfully.
    
    
    
     Executing test function test.delliptical2d ... done successfully.
    
    
    
     Executing test function test.density2d ... done successfully.
    
    
    
     Executing test function test.grid2d ... done successfully.
    
    
    
     Executing test function test.hist2d ... done successfully.
    
    
    
     Executing test function test.norm2d ... done successfully.
    
    
    
     Executing test function test.t2d ... done successfully.
    
    
    
     Executing test function test.gridData ... done successfully.
    
    
    
     Executing test function test.gridDataPlot ... Loading required package: akima
     Timing stopped at: 0.474 0.021 0.539
     Error in persp.default(x, theta = theta, phi = phi, col = col, ticktype = ticktype, :
     invalid 'z' limits
     In addition: Warning messages:
     1: In rug(x$data[, 1], ticksize = 0.01, side = 3) :
     some values will be clipped
     2: In akima::interp.new(x, y, z, xo, yo, linear = FALSE, ncp = NULL, :
     interp.new() is deprecated, use interp()
     3: In min(x) : no non-missing arguments to min; returning Inf
     4: In max(x) : no non-missing arguments to max; returning -Inf
     done successfully.
    
     RUNIT TEST PROTOCOL -- Thu Jan 19 21:31:25 2017
     ***********************************************
     Number of test functions: 11
     Number of errors: 1
     Number of failures: 0
    
    
     1 Test Suite :
     fMultivar unit testing - 11 test functions, 1 error, 0 failures
     ERROR in test.gridDataPlot: Error in persp.default(x, theta = theta, phi = phi, col = col, ticktype = ticktype, :
     invalid 'z' limits
     Error in eval(expr, envir, enclos) :
    
     unit testing failed (#test failures: 0, R errors: 1)
    
     Calls: source -> withVisible -> eval -> eval
     Execution halted
Flavor: r-patched-solaris-x86