CRAN Package Check Results for Package fbati

Last updated on 2016-06-28 14:48:22.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 1.0-1 16.97 43.95 60.92 NOTE
r-devel-linux-x86_64-fedora-clang 1.0-1 111.64 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0-1 98.90 NOTE
r-devel-osx-x86_64-clang 1.0-1 87.94 NOTE
r-devel-windows-ix86+x86_64 1.0-1 67.00 79.00 146.00 NOTE
r-patched-linux-x86_64 1.0-1 15.67 45.82 61.49 NOTE
r-patched-solaris-sparc 1.0-1 611.20 NOTE
r-patched-solaris-x86 1.0-1 133.10 NOTE
r-release-linux-x86_64 1.0-1 17.26 45.24 62.50 NOTE
r-release-osx-x86_64-mavericks 1.0-1 WARN
r-release-windows-ix86+x86_64 1.0-1 71.00 83.00 154.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0-1 65.00 85.00 150.00 OK

Check Details

Version: 1.0-1
Check: R code for possible problems
Result: NOTE
    condGene: no visible global function definition for ‘getFromNamespace’
    condGene: no visible global function definition for ‘pchisq’
    condGeneFBATControl_estEq: no visible global function definition for
     ‘getFromNamespace’
    condGeneFBATControl_estEq: no visible global function definition for
     ‘pchisq’
    condGeneFBATControl_estEqNuis: no visible global function definition
     for ‘getFromNamespace’
    condGeneP: no visible global function definition for ‘getFromNamespace’
    condGeneP: no visible global function definition for ‘pchisq’
    condGeneP2: no visible global function definition for
     ‘getFromNamespace’
    condGeneP2: no visible global function definition for ‘pchisq’
    condGeneP4: no visible global function definition for
     ‘getFromNamespace’
    condGeneP4: no visible global function definition for ‘pchisq’
    condGeneR: no visible global function definition for ‘getFromNamespace’
    condGeneR: no visible global function definition for ‘pchisq’
    cpp_gesim_set: no visible global function definition for ‘qnorm’
    cpp_gped_statCompute: no visible global function definition for
     ‘pchisq’
    cpp_gped_statCompute_A: no visible global function definition for
     ‘pchisq’
    datamatrix.R.debug: no visible global function definition for
     ‘write.csv’
    fbat.install: no visible global function definition for ‘download.file’
    fbatcStrategyStepLatex: no visible global function definition for ‘str’
    fbatj: no visible global function definition for ‘pchisq’
    fbatme: no visible global function definition for ‘pchisq’
    fbatmeev: no visible global function definition for ‘pchisq’
    ibat.R.debug: no visible global function definition for ‘rnorm’
    mmlroot: no visible global function definition for ‘runif’
    mroot: no visible global function definition for ‘optim’
    mroptim: no visible global function definition for ‘optim’
    mroptim: no visible global function definition for ‘runif’
    mrroot: no visible global function definition for ‘runif’
    mrroot2: no visible global function definition for ‘runif’
    mrroot3: no visible global function definition for ‘rnorm’
    programControl: no visible global function definition for
     ‘getFromNamespace’
    sh.install: no visible global function definition for ‘download.file’
    updateFbatcGUI: no visible global function definition for
     ‘getFromNamespace’
    updateFbatcSSFunc: no visible global function definition for
     ‘getFromNamespace’
    updateFbatgeAllGUI: no visible global function definition for
     ‘getFromNamespace’
    updateFbatgeGUI: no visible global function definition for
     ‘getFromNamespace’
    updateFbatiGUI: no visible global function definition for
     ‘getFromNamespace’
    updateFbatjGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatcGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatcGUI: no visible global function definition for ‘write.csv’
    writeFbatgeAllGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatgeAllGUI: no visible global function definition for
     ‘write.csv’
    writeFbatgeGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatgeGUI: no visible global function definition for ‘write.csv’
    writeFbatiGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatiGUI: no visible global function definition for ‘write.csv’
    writeFbatjGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatjGUI: no visible global function definition for ‘write.csv’
    Undefined global functions or variables:
     download.file getFromNamespace optim pchisq qnorm rnorm runif str
     write.csv
    Consider adding
     importFrom("stats", "optim", "pchisq", "qnorm", "rnorm", "runif")
     importFrom("utils", "download.file", "getFromNamespace", "str",
     "write.csv")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.0-1
Check: installed package size
Result: NOTE
     installed size is 5.7Mb
     sub-directories of 1Mb or more:
     libs 5.4Mb
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 1.0-1
Check: dependencies in R code
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0-1
Check: S3 generic/method consistency
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0-1
Check: replacement functions
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0-1
Check: foreign function calls
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0-1
Check: R code for possible problems
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 keycondGene: no visible global function definition for ‘getFromNamespace’
    condGene: no visible global function definition for ‘pchisq’
    condGeneFBATControl_estEq: no visible global function definition for
     ‘getFromNamespace’
    condGeneFBATControl_estEq: no visible global function definition for
     ‘pchisq’
    condGeneFBATControl_estEqNuis: no visible global function definition
     for ‘getFromNamespace’
    condGeneP: no visible global function definition for ‘getFromNamespace’
    condGeneP: no visible global function definition for ‘pchisq’
    condGeneP2: no visible global function definition for
     ‘getFromNamespace’
    condGeneP2: no visible global function definition for ‘pchisq’
    condGeneP4: no visible global function definition for
     ‘getFromNamespace’
    condGeneP4: no visible global function definition for ‘pchisq’
    condGeneR: no visible global function definition for ‘getFromNamespace’
    condGeneR: no visible global function definition for ‘pchisq’
    cpp_gesim_set: no visible global function definition for ‘qnorm’
    cpp_gped_statCompute: no visible global function definition for
     ‘pchisq’
    cpp_gped_statCompute_A: no visible global function definition for
     ‘pchisq’
    datamatrix.R.debug: no visible global function definition for
     ‘write.csv’
    fbat.install: no visible global function definition for ‘download.file’
    fbatcStrategyStepLatex: no visible global function definition for ‘str’
    fbatj: no visible global function definition for ‘pchisq’
    fbatme: no visible global function definition for ‘pchisq’
    fbatmeev: no visible global function definition for ‘pchisq’
    ibat.R.debug: no visible global function definition for ‘rnorm’
    mmlroot: no visible global function definition for ‘runif’
    mroot: no visible global function definition for ‘optim’
    mroptim: no visible global function definition for ‘optim’
    mroptim: no visible global function definition for ‘runif’
    mrroot: no visible global function definition for ‘runif’
    mrroot2: no visible global function definition for ‘runif’
    mrroot3: no visible global function definition for ‘rnorm’
    programControl: no visible global function definition for
     ‘getFromNamespace’
    sh.install: no visible global function definition for ‘download.file’
    updateFbatcGUI: no visible global function definition for
     ‘getFromNamespace’
    updateFbatcSSFunc: no visible global function definition for
     ‘getFromNamespace’
    updateFbatgeAllGUI: no visible global function definition for
     ‘getFromNamespace’
    updateFbatgeGUI: no visible global function definition for
     ‘getFromNamespace’
    updateFbatiGUI: no visible global function definition for
     ‘getFromNamespace’
    updateFbatjGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatcGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatcGUI: no visible global function definition for ‘write.csv’
    writeFbatgeAllGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatgeAllGUI: no visible global function definition for
     ‘write.csv’
    writeFbatgeGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatgeGUI: no visible global function definition for ‘write.csv’
    writeFbatiGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatiGUI: no visible global function definition for ‘write.csv’
    writeFbatjGUI: no visible global function definition for
     ‘getFromNamespace’
    writeFbatjGUI: no visible global function definition for ‘write.csv’
    Undefined global functions or variables:
     download.file getFromNamespace optim pchisq qnorm rnorm runif str
     write.csv
    Consider adding
     importFrom("stats", "optim", "pchisq", "qnorm", "rnorm", "runif")
     importFrom("utils", "download.file", "getFromNamespace", "str",
     "write.csv")
    to your NAMESPACE file.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0-1
Check: for missing documentation entries
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0-1
Check: for code/documentation mismatches
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0-1
Check: Rd \usage sections
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks