CRAN Package Check Results for Package fishmethods

Last updated on 2015-08-28 06:47:16.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.8-0 1.69 56.84 58.53 NOTE
r-devel-linux-x86_64-debian-gcc 1.8-0 1.54 55.63 57.17 NOTE
r-devel-linux-x86_64-fedora-clang 1.8-0 111.77 NOTE
r-devel-linux-x86_64-fedora-gcc 1.8-0 103.58 NOTE
r-devel-osx-x86_64-clang 1.8-0 97.34 OK
r-devel-windows-ix86+x86_64 1.8-0 12.00 128.00 140.00 NOTE
r-patched-linux-x86_64 1.8-0 1.63 58.18 59.81 OK
r-patched-solaris-sparc 1.8-0 718.80 OK
r-patched-solaris-x86 1.8-0 124.90 OK
r-release-linux-x86_64 1.8-0 1.56 56.46 58.02 OK
r-release-osx-x86_64-mavericks 1.8-0 OK
r-release-windows-ix86+x86_64 1.8-0 10.00 133.00 143.00 OK
r-oldrel-windows-ix86+x86_64 1.7-0 8.00 83.00 91.00 OK

Check Details

Version: 1.8-0
Check: R code for possible problems
Result: NOTE
    agesurv: no visible global function definition for ‘lm’
    agesurv: no visible global function definition for ‘coef’
    bheq1: no visible binding for global variable ‘sd’
    bheq2 : mean.boot1 : f: no visible global function definition for
     ‘optimize’
    bheq2: no visible binding for global variable ‘sd’
    bhnoneq: no visible global function definition for ‘optim’
    bhnoneq: no visible global function definition for ‘par’
    bhnoneq: no visible global function definition for ‘plot’
    bhnoneq: no visible global function definition for ‘lines’
    bhnoneq: no visible global function definition for ‘abline’
    bt.log: no visible global function definition for ‘qt’
    catchmsy : word.tif: no visible global function definition for ‘tiff’
    catchmsy : getrandom : rtrunc: no visible global function definition
     for ‘runif’
    catchmsy: no visible global function definition for ‘runif’
    catchmsy: no visible global function definition for ‘rnorm’
    catchmsy: no visible global function definition for ‘write.table’
    catchmsy: no visible global function definition for ‘quantile’
    catchmsy: no visible global function definition for ‘plot’
    catchmsy: no visible global function definition for ‘abline’
    catchmsy: no visible global function definition for ‘dev.off’
    catchmsy: no visible global function definition for ‘hist’
    catchmsy: no visible global function definition for ‘read.csv’
    catchmsy: no visible global function definition for ‘par’
    catchmsy: no visible global function definition for ‘matplot’
    catchmsy: no visible global function definition for ‘lines’
    catchmsy: no visible binding for global variable ‘median’
    catchmsy : <anonymous>: no visible global function definition for
     ‘quantile’
    catchsurvey: no visible global function definition for ‘optim’
    catchsurvey: no visible global function definition for ‘par’
    catchsurvey: no visible global function definition for ‘plot’
    catchsurvey: no visible global function definition for ‘lines’
    clus.lf: no visible global function definition for ‘aggregate’
    clus.mean: no visible global function definition for ‘aggregate’
    clus.mean: no visible binding for global variable ‘var’
    clus.rho: no visible global function definition for ‘aggregate’
    clus.rho: no visible global function definition for ‘var’
    clus.rho: no visible global function definition for ‘quantile’
    clus.rho.g: no visible global function definition for ‘aggregate’
    clus.rho.g: no visible global function definition for ‘aov’
    clus.rho.g: no visible global function definition for ‘qnorm’
    clus.rho.g: no visible global function definition for ‘pf’
    clus.rho.g: no visible global function definition for ‘lm’
    clus.rho.g: no visible global function definition for ‘anova’
    clus.rho.g: no visible global function definition for ‘bartlett.test’
    clus.rho.g: no visible global function definition for ‘pchisq’
    clus.str.lf: no visible global function definition for ‘aggregate’
    clus.t.test: no visible global function definition for ‘aggregate’
    clus.t.test: no visible global function definition for ‘var’
    clus.t.test: no visible global function definition for ‘qt’
    clus.t.test: no visible global function definition for ‘pt’
    clus.vb.fit: no visible global function definition for ‘aggregate’
    clus.vb.fit: no visible global function definition for ‘lm’
    clus.vb.fit: no visible global function definition for ‘coef’
    clus.vb.fit: no visible global function definition for ‘nls’
    clus.vb.fit: no visible binding for global variable ‘sd’
    clus.vb.fit: no visible global function definition for ‘quantile’
    compare2: no visible global function definition for ‘par’
    compare2: no visible global function definition for ‘plot’
    compare2: no visible global function definition for ‘axis’
    compare2: no visible global function definition for ‘box’
    compare2: no visible global function definition for ‘text’
    compare2: no visible global function definition for ‘points’
    compare2: no visible global function definition for ‘pchisq’
    convmort: no visible global function definition for ‘optimize’
    dbsra : word.tif: no visible global function definition for ‘tiff’
    dbsra : getrandom : rtrunc: no visible global function definition for
     ‘runif’
    dbsra: no visible global function definition for ‘optimize’
    dbsra: no visible global function definition for ‘write.table’
    dbsra: no visible global function definition for ‘quantile’
    dbsra: no visible global function definition for ‘plot’
    dbsra: no visible global function definition for ‘abline’
    dbsra: no visible global function definition for ‘dev.off’
    dbsra: no visible global function definition for ‘hist’
    dbsra: no visible global function definition for ‘read.csv’
    dbsra: no visible global function definition for ‘par’
    dbsra: no visible global function definition for ‘matplot’
    dbsra: no visible global function definition for ‘lines’
    dbsra: no visible binding for global variable ‘median’
    dbsra : <anonymous>: no visible global function definition for
     ‘quantile’
    dbsra: no visible global function definition for ‘barplot’
    dbsra: no visible global function definition for ‘axis’
    deltadist: no visible global function definition for ‘var’
    deplet: no visible global function definition for ‘lm’
    deplet: no visible global function definition for ‘coef’
    deplet: no visible global function definition for ‘qt’
    deplet: no visible global function definition for ‘predict’
    deplet: no visible global function definition for ‘anova’
    deplet: no visible global function definition for ‘residuals’
    deplet: no visible global function definition for ‘optimize’
    deplet: no visible global function definition for ‘rmultinom’
    deplet: no visible global function definition for ‘sd’
    deplet: no visible global function definition for ‘optim’
    deplet: no visible global function definition for ‘pchisq’
    dlproj : w: no visible global function definition for ‘optimize’
    dlproj: no visible global function definition for ‘read.csv’
    dlproj: no visible global function definition for ‘plot’
    dlproj: no visible binding for global variable ‘quantile’
    dlproj: no visible global function definition for ‘lines’
    dlproj : word.tif: no visible global function definition for ‘tiff’
    dlproj: no visible global function definition for ‘dev.off’
    epr: no visible global function definition for ‘optimize’
    grotag: no visible binding for global variable ‘dt’
    grotag: no visible global function definition for ‘median’
    grotag : f1: no visible global function definition for ‘dnorm’
    grotag: no visible global function definition for ‘optim’
    grotag: no visible global function definition for ‘cov2cor’
    growth: no visible global function definition for ‘par’
    growth: no visible global function definition for ‘aggregate’
    growth: no visible binding for global variable ‘var’
    growth: no visible global function definition for ‘nls’
    growth: no visible global function definition for ‘plot’
    growth: no visible global function definition for ‘lines’
    growth: no visible global function definition for ‘abline’
    growthResid: no visible global function definition for ‘par’
    growthResid: no visible global function definition for ‘plot’
    growthResid: no visible global function definition for ‘rgb’
    growthResid: no visible global function definition for ‘abline’
    growthTraject: no visible global function definition for ‘par’
    growthTraject: no visible global function definition for ‘plot’
    growthTraject: no visible global function definition for ‘arrows’
    growthTraject: no visible global function definition for ‘curve’
    growtrans: no visible global function definition for ‘pnorm’
    irm_cr: no visible global function definition for ‘optim’
    irm_cr: no visible global function definition for ‘cov2cor’
    irm_h: no visible global function definition for ‘optim’
    irm_h: no visible global function definition for ‘cov2cor’
    mort.al: no visible global function definition for ‘aggregate’
    mort.al: no visible global function definition for ‘rbinom’
    mort.al: no visible global function definition for ‘rexp’
    mort.al: no visible binding for global variable ‘sd’
    mrN.single: no visible global function definition for ‘qhyper’
    mrN.single: no visible global function definition for ‘qbinom’
    pgen : biascor: no visible global function definition for ‘sd’
    pgen: no visible global function definition for ‘rnorm’
    pgen: no visible global function definition for ‘rlnorm’
    powertrend: no visible global function definition for ‘qt’
    powertrend: no visible global function definition for ‘pt’
    powertrend: no visible global function definition for ‘plot’
    pwpop: no visible global function definition for ‘optim’
    pwpop: no visible global function definition for ‘plot’
    pwpop: no visible global function definition for ‘lines’
    remp: no visible global function definition for ‘runif’
    sbpr: no visible global function definition for ‘optimize’
    sbpr: no visible global function definition for ‘par’
    sbpr: no visible global function definition for ‘plot’
    schnabel: no visible global function definition for ‘qpois’
    schnabel: no visible global function definition for ‘qt’
    surveyfit: no visible global function definition for ‘acf’
    surveyfit: no visible global function definition for ‘ts’
    surveyfit: no visible global function definition for ‘arima’
    surveyfit: no visible global function definition for ‘plot’
    surveyfit: no visible global function definition for ‘lines’
    surveyref: no visible global function definition for ‘quantile’
    surveyref: no visible global function definition for ‘arima’
    surveyref: no visible global function definition for ‘stack’
    vbfr: no visible global function definition for ‘nls’
    vbfr: no visible global function definition for ‘par’
    vbfr: no visible global function definition for ‘plot’
    vbfr: no visible global function definition for ‘predict’
    vbfr: no visible global function definition for ‘lines’
    vbfr: no visible global function definition for ‘abline’
    vblrt: no visible global function definition for ‘aggregate’
    vblrt: no visible global function definition for ‘lm’
    vblrt: no visible global function definition for ‘coef’
    vblrt: no visible binding for global variable ‘var’
    vblrt: no visible global function definition for ‘nls’
    vblrt: no visible global function definition for ‘residuals’
    vblrt: no visible global function definition for ‘pchisq’
    vblrt: no visible global function definition for ‘par’
    vblrt: no visible global function definition for ‘plot’
    vblrt: no visible global function definition for ‘points’
    vblrt: no visible global function definition for ‘lines’
    vblrt: no visible global function definition for ‘abline’
    ypr: no visible global function definition for ‘plot’
    zt: no visible global function definition for ‘sd’
    Undefined global functions or variables:
     abline acf aggregate anova aov arima arrows axis barplot
     bartlett.test box coef cov2cor curve dev.off dnorm dt hist lines lm
     matplot median nls optim optimize par pchisq pf plot pnorm points
     predict pt qbinom qhyper qnorm qpois qt quantile rbinom read.csv
     residuals rexp rgb rlnorm rmultinom rnorm runif sd stack text tiff ts
     var write.table
    Consider adding
     importFrom("grDevices", "dev.off", "rgb", "tiff")
     importFrom("graphics", "abline", "arrows", "axis", "barplot", "box",
     "curve", "hist", "lines", "matplot", "par", "plot",
     "points", "text")
     importFrom("stats", "acf", "aggregate", "anova", "aov", "arima",
     "bartlett.test", "coef", "cov2cor", "dnorm", "dt", "lm",
     "median", "nls", "optim", "optimize", "pchisq", "pf",
     "pnorm", "predict", "pt", "qbinom", "qhyper", "qnorm",
     "qpois", "qt", "quantile", "rbinom", "residuals", "rexp",
     "rlnorm", "rmultinom", "rnorm", "runif", "sd", "ts", "var")
     importFrom("utils", "read.csv", "stack", "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64