CRAN Package Check Results for Package flexsurv

Last updated on 2015-09-03 14:48:18.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.6 1.15 143.68 144.83 NOTE
r-devel-linux-x86_64-debian-gcc 0.6 1.23 140.12 141.35 NOTE
r-devel-linux-x86_64-fedora-clang 0.6 274.43 NOTE
r-devel-linux-x86_64-fedora-gcc 0.6 264.84 NOTE
r-devel-osx-x86_64-clang 0.6 198.63 OK
r-devel-windows-ix86+x86_64 0.6 9.00 215.00 224.00 NOTE
r-patched-linux-x86_64 0.6 1.14 169.32 170.46 OK
r-patched-solaris-sparc 0.6 1950.20 OK
r-patched-solaris-x86 0.6 357.10 OK
r-release-linux-x86_64 0.6 1.11 157.71 158.82 OK
r-release-osx-x86_64-mavericks 0.6 OK
r-release-windows-ix86+x86_64 0.6 7.00 236.00 243.00 OK
r-oldrel-windows-ix86+x86_64 0.6 9.00 320.00 329.00 OK

Check Details

Version: 0.6
Check: R code for possible problems
Result: NOTE
    Hgamma: no visible global function definition for ‘pgamma’
    Hlink : <anonymous>: no visible global function definition for ‘pnorm’
    Hlnorm: no visible global function definition for ‘plnorm’
    Slink : <anonymous>: no visible global function definition for ‘pnorm’
    ancpar.formula: no visible global function definition for ‘terms’
    ancpar.formula: no visible global function definition for ‘reformulate’
    bootci.fmsm: no visible binding for global variable ‘quantile’
    check.formula: no visible global function definition for ‘terms’
    cisumm.flexsurvreg : <anonymous>: no visible global function definition
     for ‘quantile’
    concat.formulae : <anonymous>: no visible global function definition
     for ‘terms’
    concat.formulae : <anonymous>: no visible global function definition
     for ‘delete.response’
    dgengamma: no visible global function definition for ‘dlnorm’
    dgompertz: no visible global function definition for ‘dexp’
    dlink : <anonymous>: no visible global function definition for ‘dnorm’
    dweibull.quiet: no visible global function definition for ‘dweibull’
    flexsurv.splineinits: no visible global function definition for
     ‘model.extract’
    flexsurv.splineinits: no visible global function definition for
     ‘as.formula’
    flexsurv.splineinits: no visible global function definition for ‘qnorm’
    flexsurv.splineinits: no visible global function definition for ‘coef’
    flexsurv.splineinits: no visible global function definition for ‘lm’
    flexsurvreg: no visible global function definition for ‘model.extract’
    flexsurvreg: no visible global function definition for ‘model.matrix’
    flexsurvreg: no visible global function definition for ‘qnorm’
    flexsurvspline: no visible global function definition for ‘as.formula’
    flexsurvspline: no visible global function definition for
     ‘model.extract’
    flexsurvspline: no visible global function definition for ‘quantile’
    form.model.matrix: no visible global function definition for
     ‘model.frame’
    form.model.matrix: no visible global function definition for
     ‘delete.response’
    form.model.matrix: no visible global function definition for ‘terms’
    form.model.matrix: no visible global function definition for
     ‘model.matrix’
    form.msm.newdata: no visible global function definition for ‘na.omit’
    form.msm.newdata: no visible global function definition for
     ‘model.frame’
    get.locform: no visible global function definition for ‘terms’
    hgamma: no visible global function definition for ‘dgamma’
    hgamma: no visible global function definition for ‘pgamma’
    hlink : <anonymous>: no visible global function definition for ‘plogis’
    hlink : <anonymous>: no visible global function definition for ‘dnorm’
    hlink : <anonymous>: no visible global function definition for ‘pnorm’
    hlnorm: no visible global function definition for ‘dlnorm’
    hlnorm: no visible global function definition for ‘plnorm’
    ldlink : <anonymous>: no visible global function definition for ‘dnorm’
    logLik.flexsurvreg: no visible global function definition for
     ‘model.frame’
    msfit.flexsurvreg: no visible global function definition for ‘na.omit’
    msfit.flexsurvreg: no visible binding for global variable ‘cov’
    pars.fmsm: no visible global function definition for ‘na.omit’
    pgenf: no visible global function definition for ‘pbeta’
    pgenf.orig: no visible global function definition for ‘pbeta’
    pgengamma: no visible global function definition for ‘plnorm’
    pgengamma: no visible global function definition for ‘pgamma’
    pgengamma.orig: no visible global function definition for ‘pgamma’
    pgompertz: no visible global function definition for ‘pexp’
    plot.flexsurvreg: no visible global function definition for
     ‘model.frame’
    plot.flexsurvreg: no visible global function definition for
     ‘model.matrix’
    plot.flexsurvreg: no visible global function definition for
     ‘as.formula’
    plot.flexsurvreg: no visible global function definition for ‘lines’
    print.flexsurvreg: no visible global function definition for
     ‘model.matrix’
    pweibull.quiet: no visible global function definition for ‘pweibull’
    qgeneric: no visible global function definition for ‘uniroot’
    qgenf: no visible global function definition for ‘qf’
    qgenf.orig: no visible global function definition for ‘qf’
    qgengamma: no visible global function definition for ‘qlnorm’
    qgengamma: no visible global function definition for ‘qgamma’
    qgengamma.orig: no visible global function definition for ‘qgamma’
    qgompertz: no visible global function definition for ‘qexp’
    qllogis: no visible global function definition for ‘qlogis’
    rgenf: no visible global function definition for ‘rf’
    rgenf.orig: no visible global function definition for ‘rf’
    rgengamma: no visible global function definition for ‘rlnorm’
    rgengamma: no visible global function definition for ‘rgamma’
    rgengamma.orig: no visible global function definition for ‘rgamma’
    rgompertz: no visible global function definition for ‘runif’
    rllogis: no visible global function definition for ‘runif’
    rsurvspline: no visible global function definition for ‘runif’
    rweibullPH: no visible global function definition for ‘rweibull’
    sim.fmsm: no visible global function definition for ‘na.omit’
    sr.llog.inits: no visible global function definition for ‘median’
    sr.llog.inits: no visible global function definition for ‘quantile’
    sr.ln.inits: no visible global function definition for ‘sd’
    sr.weib.inits: no visible global function definition for ‘var’
    sr.weibPH.inits: no visible global function definition for ‘var’
    sr2fsexp: no visible global function definition for ‘coef’
    sr2fsllog: no visible global function definition for ‘coef’
    sr2fsln: no visible global function definition for ‘coef’
    sr2fswei: no visible global function definition for ‘coef’
    summary.flexsurvreg: no visible global function definition for
     ‘model.frame’
    summary.flexsurvreg: no visible global function definition for
     ‘model.matrix’
    Undefined global functions or variables:
     as.formula coef cov delete.response dexp dgamma dlnorm dnorm dweibull
     lines lm median model.extract model.frame model.matrix na.omit pbeta
     pexp pgamma plnorm plogis pnorm pweibull qexp qf qgamma qlnorm qlogis
     qnorm quantile reformulate rf rgamma rlnorm runif rweibull sd terms
     uniroot var
    Consider adding
     importFrom("graphics", "lines")
     importFrom("stats", "as.formula", "coef", "cov", "delete.response",
     "dexp", "dgamma", "dlnorm", "dnorm", "dweibull", "lm",
     "median", "model.extract", "model.frame", "model.matrix",
     "na.omit", "pbeta", "pexp", "pgamma", "plnorm", "plogis",
     "pnorm", "pweibull", "qexp", "qf", "qgamma", "qlnorm",
     "qlogis", "qnorm", "quantile", "reformulate", "rf",
     "rgamma", "rlnorm", "runif", "rweibull", "sd", "terms",
     "uniroot", "var")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64