CRAN Package Check Results for Package fpca

Last updated on 2017-03-29 22:47:02.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2-1 0.73 56.26 57.00 NOTE
r-devel-linux-x86_64-debian-gcc 0.2-1 0.66 57.02 57.68 NOTE
r-devel-linux-x86_64-fedora-clang 0.2-1 98.85 NOTE --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 0.2-1 95.18 NOTE --no-stop-on-test-error
r-devel-macos-x86_64-clang 0.2-1 73.15 NOTE --no-stop-on-test-error
r-devel-windows-ix86+x86_64 0.2-1 2.00 93.00 95.00 NOTE
r-patched-linux-x86_64 0.2-1 0.68 51.44 52.12 NOTE
r-patched-solaris-sparc 0.2-1 680.80 NOTE
r-patched-solaris-x86 0.2-1 113.90 NOTE
r-release-linux-x86_64 0.2-1 0.70 52.41 53.10 NOTE
r-release-osx-x86_64-mavericks 0.2-1 NOTE
r-release-windows-ix86+x86_64 0.2-1 3.00 138.00 141.00 NOTE
r-oldrel-windows-ix86+x86_64 0.2-1 7.00 110.00 117.00 NOTE

Check Details

Version: 0.2-1
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2-1
Check: R code for possible problems
Result: NOTE
    GenObs: no visible global function definition for ‘rnorm’
    GenObs.T: no visible global function definition for ‘rt’
    MeasL: no visible global function definition for ‘rbeta’
    OutDet: no visible global function definition for ‘median’
    RanCur: no visible global function definition for ‘rnorm’
    init: no visible global function definition for ‘prcomp’
    Undefined global functions or variables:
     median prcomp rbeta rnorm rt
    Consider adding
     importFrom("stats", "median", "prcomp", "rbeta", "rnorm", "rt")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.2-1
Check: Rd line widths
Result: NOTE
    Rd file 'fpca.mle.Rd':
     \usage lines wider than 90 characters:
     fpca.mle(data.m, M.set,r.set, ini.method="EM", basis.method="bs", sl.v=rep(0.5,10), max.step=50,
     \examples lines wider than 100 characters:
     ##model selection result: the true model M=5, r=3 is selected with the smallest CV score among all converged models
     ##look at the CV scores and convergence for each model: note that model (M=5, r=4) does not converge.
     #get predicted trajectories on a fine grid: the same grid for which mean and eigenfunctions are evaluated
     plot(t.c,y.c,ylim=range(pred[,id]),xlab="time",ylab="obs", main=paste("predicted trajectory of curve", id))
     ##model selection result: the true model M=5, r=3 is selected with the smallest CV score among all converged models
     plot(grids.new,result$eigenfunctions[i,],ylim=range(result$eigenfunctions),xlab="time",ylab=paste("eigenfunction",i))
     ##look at the CV scores and convergence for each model: note that model (M=5, r=4) does not converge.
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.2-1
Flags: --no-stop-on-test-error
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 0.2-1
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    GenObs: no visible global function definition for ‘rnorm’
    GenObs.T: no visible global function definition for ‘rt’
    MeasL: no visible global function definition for ‘rbeta’
    OutDet: no visible global function definition for ‘median’
    RanCur: no visible global function definition for ‘rnorm’
    init: no visible global function definition for ‘prcomp’
    Undefined global functions or variables:
     median prcomp rbeta rnorm rt
    Consider adding
     importFrom("stats", "median", "prcomp", "rbeta", "rnorm", "rt")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 0.2-1
Flags: --no-stop-on-test-error
Check: Rd line widths
Result: NOTE
    Rd file 'fpca.mle.Rd':
     \usage lines wider than 90 characters:
     fpca.mle(data.m, M.set,r.set, ini.method="EM", basis.method="bs", sl.v=rep(0.5,10), max.step=50,
     \examples lines wider than 100 characters:
     ##model selection result: the true model M=5, r=3 is selected with the smallest CV score among all converged models
     ##look at the CV scores and convergence for each model: note that model (M=5, r=4) does not converge.
     #get predicted trajectories on a fine grid: the same grid for which mean and eigenfunctions are evaluated
     plot(t.c,y.c,ylim=range(pred[,id]),xlab="time",ylab="obs", main=paste("predicted trajectory of curve", id))
     ##model selection result: the true model M=5, r=3 is selected with the smallest CV score among all converged models
     plot(grids.new,result$eigenfunctions[i,],ylim=range(result$eigenfunctions),xlab="time",ylab=paste("eigenfunction",i))
     ##look at the CV scores and convergence for each model: note that model (M=5, r=4) does not converge.
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc