CRAN Package Check Results for Package frailtypack

Last updated on 2015-09-02 17:49:17.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.7.5 59.12 33.56 92.68 NOTE
r-devel-linux-x86_64-debian-gcc 2.7.6.1 60.85 34.62 95.46 NOTE
r-devel-linux-x86_64-fedora-clang 2.7.6.1 108.62 OK
r-devel-linux-x86_64-fedora-gcc 2.7.6.1 106.35 OK
r-devel-osx-x86_64-clang 2.7.6.1 113.99 OK
r-devel-windows-ix86+x86_64 2.7.6.1 174.00 100.00 274.00 OK
r-patched-linux-x86_64 2.7.5 60.56 34.73 95.29 NOTE
r-patched-solaris-sparc 2.7.6.1 862.90 OK
r-patched-solaris-x86 2.7.6.1 263.90 OK
r-release-linux-x86_64 2.7.6.1 61.13 34.28 95.41 NOTE
r-release-osx-x86_64-mavericks 2.7.6.1 WARN
r-release-windows-ix86+x86_64 2.7.6.1 179.00 88.00 267.00 OK
r-oldrel-windows-ix86+x86_64 2.7.6.1 174.00 100.00 274.00 OK

Check Details

Version: 2.7.5
Check: installed package size
Result: NOTE
     installed size is 5.6Mb
     sub-directories of 1Mb or more:
     libs 5.2Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 2.7.5
Check: R code for possible problems
Result: NOTE
    Cmeasures: no visible global function definition for ‘complete.cases’
    Cmeasures: no visible global function definition for ‘update’
    Cmeasures: no visible global function definition for ‘as.formula’
    Cmeasures: no visible global function definition for ‘terms’
    Cmeasures: no visible global function definition for ‘model.matrix’
    Cmeasures: no visible global function definition for ‘aggregate’
    Cmeasures : <anonymous>: no visible global function definition for
     ‘quantile’
    Cmeasures : <anonymous>: no visible global function definition for
     ‘var’
    Diffepoce: no visible global function definition for ‘qnorm’
    additivePenal: no visible global function definition for ‘terms’
    additivePenal: no visible global function definition for
     ‘model.extract’
    additivePenal: no visible global function definition for
     ‘is.empty.model’
    additivePenal: no visible global function definition for ‘model.matrix’
    additivePenal: no visible binding for global variable ‘contrasts’
    additivePenal: no visible global function definition for ‘.getXlevels’
    additivePenal: no visible global function definition for
     ‘flush.console’
    additivePenal: no visible global function definition for ‘pchisq’
    epoce: no visible global function definition for ‘model.extract’
    epoce: no visible global function definition for ‘terms’
    epoce: no visible global function definition for ‘model.matrix’
    epoce: no visible global function definition for ‘aggregate’
    frailtyPenal: no visible global function definition for ‘terms’
    frailtyPenal: no visible global function definition for ‘model.extract’
    frailtyPenal: no visible global function definition for
     ‘is.empty.model’
    frailtyPenal: no visible global function definition for ‘model.matrix’
    frailtyPenal: no visible binding for global variable ‘contrasts’
    frailtyPenal: no visible global function definition for ‘.getXlevels’
    frailtyPenal: no visible global function definition for ‘flush.console’
    frailtyPenal: no visible global function definition for ‘pchisq’
    frailtyPenal: no visible global function definition for ‘aggregate’
    lines.frailtyPenal: no visible global function definition for
     ‘matlines’
    lines.frailtyPenal: no visible global function definition for ‘lines’
    multivPenal: no visible global function definition for ‘get_all_vars’
    multivPenal: no visible global function definition for ‘update’
    multivPenal: no visible global function definition for ‘terms’
    multivPenal: no visible global function definition for ‘model.extract’
    multivPenal: no visible global function definition for ‘is.empty.model’
    multivPenal: no visible global function definition for ‘model.matrix’
    multivPenal: no visible binding for global variable ‘contrasts’
    multivPenal: no visible global function definition for ‘flush.console’
    multivPenal: no visible global function definition for ‘aggregate’
    multivPenal: no visible global function definition for ‘pchisq’
    plot.Diffepoce: no visible global function definition for ‘matplot’
    plot.Diffepoce: no visible global function definition for ‘plot’
    plot.Diffepoce: no visible global function definition for ‘abline’
    plot.additivePenal: no visible global function definition for ‘matplot’
    plot.additivePenal: no visible global function definition for ‘plot’
    plot.additivePenal: no visible global function definition for
     ‘matlines’
    plot.additivePenal: no visible global function definition for ‘lines’
    plot.additivePenal: no visible global function definition for ‘legend’
    plot.epoce: no visible global function definition for ‘plot’
    plot.epoce: no visible global function definition for ‘legend’
    plot.frailtyPenal: no visible global function definition for ‘matplot’
    plot.frailtyPenal: no visible global function definition for ‘matlines’
    plot.frailtyPenal: no visible global function definition for ‘plot’
    plot.frailtyPenal: no visible global function definition for ‘lines’
    plot.frailtyPenal: no visible global function definition for ‘legend’
    plot.jointPenal: no visible global function definition for ‘matplot’
    plot.jointPenal: no visible global function definition for ‘matlines’
    plot.jointPenal: no visible global function definition for ‘plot’
    plot.jointPenal: no visible global function definition for ‘lines’
    plot.jointPenal: no visible global function definition for ‘legend’
    plot.multivPenal: no visible global function definition for ‘matplot’
    plot.multivPenal: no visible global function definition for ‘matlines’
    plot.multivPenal: no visible global function definition for ‘plot’
    plot.multivPenal: no visible global function definition for ‘lines’
    plot.multivPenal: no visible global function definition for ‘legend’
    plot.nestedPenal: no visible global function definition for ‘matplot’
    plot.nestedPenal: no visible global function definition for ‘plot’
    plot.nestedPenal: no visible global function definition for ‘matlines’
    plot.nestedPenal: no visible global function definition for ‘lines’
    plot.nestedPenal: no visible global function definition for ‘legend’
    plot.predFrailty: no visible global function definition for ‘matplot’
    plot.predFrailty: no visible global function definition for ‘matlines’
    plot.predFrailty: no visible global function definition for ‘legend’
    plot.predFrailty: no visible global function definition for ‘abline’
    plot.predJoint: no visible global function definition for ‘par’
    plot.predJoint: no visible global function definition for ‘matplot’
    plot.predJoint: no visible global function definition for ‘matlines’
    plot.predJoint: no visible global function definition for ‘plot’
    plot.predJoint: no visible global function definition for ‘lines’
    plot.predJoint: no visible global function definition for ‘abline’
    plot.predJoint: no visible global function definition for ‘legend’
    prediction: no visible global function definition for ‘as.formula’
    prediction: no visible global function definition for ‘model.extract’
    prediction: no visible global function definition for ‘terms’
    prediction: no visible global function definition for ‘model.matrix’
    prediction: no visible global function definition for ‘aggregate’
    prediction: no visible binding for global variable ‘quantile’
    prediction: no visible global function definition for ‘rgamma’
    print.additivePenal: no visible global function definition for ‘pchisq’
    print.frailtyPenal: no visible global function definition for ‘par’
    print.frailtyPenal: no visible global function definition for ‘matplot’
    print.frailtyPenal: no visible global function definition for ‘pchisq’
    print.frailtyPenal: no visible global function definition for ‘pnorm’
    print.jointPenal: no visible global function definition for ‘par’
    print.jointPenal: no visible global function definition for ‘matplot’
    print.jointPenal: no visible global function definition for ‘pchisq’
    print.jointPenal: no visible global function definition for ‘pnorm’
    print.multivPenal: no visible global function definition for ‘pchisq’
    print.multivPenal: no visible global function definition for ‘pnorm’
    print.nestedPenal: no visible global function definition for ‘pchisq’
    print.nestedPenal: no visible global function definition for ‘pnorm’
    summary.additivePenal: no visible global function definition for
     ‘qnorm’
    summary.frailtyPenal: no visible global function definition for ‘qnorm’
    summary.jointPenal: no visible global function definition for ‘qnorm’
    summary.multivPenal: no visible global function definition for ‘qnorm’
    summary.nestedPenal: no visible global function definition for ‘qnorm’
    Undefined global functions or variables:
     .getXlevels abline aggregate as.formula complete.cases contrasts
     flush.console get_all_vars is.empty.model legend lines matlines
     matplot model.extract model.matrix par pchisq plot pnorm qnorm
     quantile rgamma terms update var
    Consider adding
     importFrom("graphics", "abline", "legend", "lines", "matlines",
     "matplot", "par", "plot")
     importFrom("stats", ".getXlevels", "aggregate", "as.formula",
     "complete.cases", "contrasts", "get_all_vars",
     "is.empty.model", "model.extract", "model.matrix", "pchisq",
     "pnorm", "qnorm", "quantile", "rgamma", "terms", "update",
     "var")
     importFrom("utils", "flush.console")
    to your NAMESPACE.
Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.7.6.1
Check: installed package size
Result: NOTE
     installed size is 5.7Mb
     sub-directories of 1Mb or more:
     libs 5.3Mb
Flavors: r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64

Version: 2.7.6.1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
     Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
Flavor: r-release-osx-x86_64-mavericks