CRAN Package Check Results for Package gRapHD

Last updated on 2017-10-19 17:48:25.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.4 3.68 34.54 38.22 NOTE
r-devel-linux-x86_64-debian-gcc 0.2.4 4.38 34.60 38.98 NOTE
r-devel-linux-x86_64-fedora-clang 0.2.4 71.08 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.4 70.48 NOTE
r-devel-windows-ix86+x86_64 0.2.4 28.00 74.00 102.00 NOTE
r-patched-linux-x86_64 0.2.4 4.11 35.48 39.59 NOTE
r-patched-solaris-x86 0.2.4 93.30 NOTE
r-release-linux-x86_64 0.2.4 4.31 35.08 39.39 NOTE
r-release-windows-ix86+x86_64 0.2.4 19.00 69.00 88.00 NOTE
r-release-osx-x86_64 0.2.4 ERROR
r-oldrel-windows-ix86+x86_64 0.2.4 15.00 70.00 85.00 NOTE
r-oldrel-osx-x86_64 0.2.4 NOTE

Additional issues

clang-ASAN clang-UBSAN gcc-UBSAN valgrind

Check Details

Version: 0.2.4
Check: package namespace information
Result: NOTE
     Namespace with empty importFrom: ‘methods’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.2.4
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.gRapHD print.gRapHD summary.gRapHD
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.2.4
Check: R code for possible problems
Result: NOTE
    CI.test: no visible global function definition for ‘cov’
    CI.test: no visible global function definition for ‘var’
    SubGraph: no visible global function definition for ‘new’
    chStat: no visible global function definition for ‘cov’
    chStat: no visible global function definition for ‘var’
    fit: no visible global function definition for ‘var’
    fit: no visible global function definition for ‘new’
    gRapHD.graphNEL: no visible global function definition for ‘new’
    graphNEL.gRapHD: no visible global function definition for ‘new’
    jTree: no visible global function definition for ‘is’
    matrix.gRapHD: no visible global function definition for ‘new’
    minForest: no visible global function definition for ‘new’
    normDens: no visible global function definition for ‘dnorm’
    normDens: no visible global function definition for ‘mahalanobis’
    plot.gRapHD: no visible global function definition for ‘par’
    plot.gRapHD: no visible global function definition for ‘plot.new’
    plot.gRapHD: no visible global function definition for ‘plot.window’
    plot.gRapHD: no visible global function definition for ‘lines’
    plot.gRapHD: no visible global function definition for ‘polygon’
    plot.gRapHD: no visible global function definition for ‘symbols’
    plot.gRapHD: no visible global function definition for ‘text’
    plot.gRapHD: no visible global function definition for ‘title’
    stepb : oneslice.deviance: no visible global function definition for
     ‘addmargins’
    stepb : cen.cov: no visible global function definition for ‘var’
    stepb : cen.cov: no visible binding for global variable ‘var’
    stepb : nCI.test: no visible global function definition for ‘ftable’
    summary.gRapHD: no visible global function definition for ‘is’
    coerce,gRapHD-graphNEL: no visible global function definition for ‘new’
    coerce,graphNEL-gRapHD: no visible global function definition for ‘new’
    coerce,matrix-gRapHD: no visible global function definition for ‘new’
    plot,gRapHD: no visible global function definition for ‘par’
    plot,gRapHD: no visible global function definition for ‘plot.new’
    plot,gRapHD: no visible global function definition for ‘plot.window’
    plot,gRapHD: no visible global function definition for ‘lines’
    plot,gRapHD: no visible global function definition for ‘polygon’
    plot,gRapHD: no visible global function definition for ‘symbols’
    plot,gRapHD: no visible global function definition for ‘text’
    plot,gRapHD: no visible global function definition for ‘title’
    summary,gRapHD: no visible global function definition for ‘is’
    Undefined global functions or variables:
     addmargins cov dnorm ftable is lines mahalanobis new par plot.new
     plot.window polygon symbols text title var
    Consider adding
     importFrom("graphics", "lines", "par", "plot.new", "plot.window",
     "polygon", "symbols", "text", "title")
     importFrom("methods", "is", "new")
     importFrom("stats", "addmargins", "cov", "dnorm", "ftable",
     "mahalanobis", "var")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.2.4
Check: compiled code
Result: NOTE
    File ‘gRapHD/libs/gRapHD.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.2.4
Check: package dependencies
Result: ERROR
    Package required but not available: ‘graph’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64