CRAN Package Check Results for Package gRbase

Last updated on 2015-01-27 05:47:34.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7-0.1 72.59 94.77 167.36 NOTE
r-devel-linux-x86_64-debian-gcc 1.7-0.1 84.45 93.72 178.17 NOTE
r-devel-linux-x86_64-fedora-clang 1.7-0.1 390.85 NOTE
r-devel-linux-x86_64-fedora-gcc 1.7-0.1 391.53 NOTE
r-devel-osx-x86_64-clang 1.7-0.1 297.18 NOTE
r-devel-windows-ix86+x86_64 1.7-0.1 229.00 179.00 408.00 NOTE
r-patched-linux-x86_64 1.7-0.1 85.15 104.54 189.68 NOTE
r-patched-solaris-sparc 1.7-0.1 2423.70 NOTE
r-patched-solaris-x86 1.7-0.1 509.60 NOTE
r-release-linux-ix86 1.7-0.1 98.52 124.60 223.12 NOTE
r-release-linux-x86_64 1.7-0.1 86.50 104.32 190.82 NOTE
r-release-osx-x86_64-mavericks 1.7-0.1 NOTE
r-release-osx-x86_64-snowleopard 1.7-0.1 NOTE
r-release-windows-ix86+x86_64 1.7-0.1 306.00 203.00 509.00 NOTE
r-oldrel-windows-ix86+x86_64 1.7-0.1 320.00 275.00 595.00 OK

Memtest notes: UBSAN-clang-trunk UBSAN-clang-trunk UBSAN UBSAN

Check Details

Version: 1.7-0.1
Check: installed package size
Result: NOTE
     installed size is 9.4Mb
     sub-directories of 1Mb or more:
     libs 7.0Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 1.7-0.1
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘gRbase-Ex.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.7-0.1
Check: foreign function calls
Result: NOTE
    Call with DUP:
     .C("C_getCellNumber", as.integer(cell), as.integer(perm), as.integer(pvec),
     length(cell), integer(1), DUP = FALSE, PACKAGE = "gRbase")
    DUP is no longer supported and will be ignored.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.7-0.1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     as.gmData.array as.gmData.data.frame as.gmData.table
     coerceGraph.dgCMatrix coerceGraph.graphNEL coerceGraph.igraph
     coerceGraph.matrix dataOrigin.gmData description<-.gmData
     edgeList.default fit.ggm fit.hllm formula<-.gModel getCliques.default
     getCliques.graphNEL getFit.gRfit getFit<-.gRfit gmData.gModel
     gmData<-.gModel iplot.graphNEL is.DAG.Matrix is.DAG.graphNEL
     is.DAG.matrix is.DG.Matrix is.DG.graphNEL is.DG.matrix is.TUG.Matrix
     is.TUG.graphNEL is.TUG.matrix is.UG.Matrix is.UG.graphNEL
     is.UG.matrix jTree.default latent.gmData latent<-.gmData mcs.default
     mcsmarked.default minimalTriang.default moralize.default mpd.default
     nLevels.array nLevels.gmData nLevels.parray nLevels<-.gmData
     nominal.gmData nominal<-.gmData nonEdgeList.default
     observations.gmData observations<-.gmData ordinal.gmData
     ordinal<-.gmData rip.default shortNames.gmData shortNames<-.gmData
     stepwise.hllm topoSort.default triangulate.default valueLabels.array
     valueLabels.gmData valueLabels.parray valueLabels<-.gmData
     varNames.array varNames.gmData varNames.parray varNames<-.gmData
     varTypes.gmData varTypes<-.gmData vpar.Matrix vpar.graphNEL
     vpar.matrix print.gModel print.gRfit print.gmData print.parray
     print.ripOrder summary.gRfit summary.gmData plot.ripOrder
     update.gModel all.subsets
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.7-0.1
Check: foreign function calls
Result: NOTE
    Call with DUP != TRUE:
     .C("C_getCellNumber", as.integer(cell), as.integer(perm), as.integer(pvec),
     length(cell), integer(1), DUP = FALSE, PACKAGE = "gRbase")
    DUP = FALSE is deprecated and will be disabled in future versions of R.
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.7-0.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘microbenchmark’
Flavor: r-patched-solaris-sparc

Version: 1.7-0.1
Check: foreign function calls
Result: NOTE
    Call with DUP = FALSE:
     .C("C_getCellNumber", as.integer(cell), as.integer(perm), as.integer(pvec),
     length(cell), integer(1), DUP = FALSE, PACKAGE = "gRbase")
    DUP = FALSE is deprecated and may be disabled in future versions of R.
Flavor: r-release-osx-x86_64-snowleopard

Version: 1.7-0.1
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘gRain’
Flavor: r-release-osx-x86_64-snowleopard