CRAN Package Check Results for Package gRim

Last updated on 2014-11-23 01:48:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1-17 13.49 68.54 82.03 NOTE
r-devel-linux-x86_64-debian-gcc 0.1-17 14.42 67.24 81.66 NOTE
r-devel-linux-x86_64-fedora-clang 0.1-17 199.11 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1-17 189.66 NOTE
r-devel-osx-x86_64-clang 0.1-17 162.39 NOTE
r-devel-windows-ix86+x86_64 0.1-17 42.00 119.00 161.00 NOTE
r-patched-linux-x86_64 0.1-17 15.03 70.68 85.71 NOTE
r-patched-solaris-sparc 0.1-17 1056.10 NOTE
r-patched-solaris-x86 0.1-17 250.00 NOTE
r-release-linux-ix86 0.1-17 18.36 82.65 101.01 NOTE
r-release-linux-x86_64 0.1-17 15.23 71.41 86.64 NOTE
r-release-osx-x86_64-mavericks 0.1-17 NOTE
r-release-osx-x86_64-snowleopard 0.1-17 NOTE
r-release-windows-ix86+x86_64 0.1-17 55.00 133.00 188.00 NOTE
r-oldrel-windows-ix86+x86_64 0.1-17 41.00 127.00 168.00 NOTE

Check Details

Version: 0.1-17
Check: top-level files
Result: NOTE
    Non-standard files/directories found at top level:
     ‘Wishlist.txt’ ‘gRim-Ex.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1-17
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘gRain’ ‘gRbase’ ‘methods’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1-17
Check: R code for possible problems
Result: NOTE
    .CGstats2initpms: no visible global function definition for
     ‘rowSumsPrim’
    .CI_MC_prim: no visible global function definition for ‘tableMargin’
    .CI_MC_prim: no visible global function definition for ‘outerPrim’
    .CI_MC_prim: no visible global function definition for ‘colSumsPrim’
    .CI_X2_prim: no visible global function definition for ‘tableMargin’
    .CI_X2_prim: no visible global function definition for ‘tablePerm’
    .CI_X2_prim: no visible global function definition for ‘tableOp’
    .CI_X2_prim: no visible global function definition for ‘rowSumsPrim’
    .add.edge_glist: no visible global function definition for ‘uniquePrim’
    .add.edge_glist: no visible global function definition for
     ‘intersectPrim’
    .add.edge_glist: no visible global function definition for
     ‘removeRedundant’
    .add.term: no visible global function definition for ‘removeRedundant’
    .add.term_glist: no visible global function definition for ‘isin’
    .add.term_glist: no visible global function definition for
     ‘removeRedundant’
    .aedge_glist: no visible global function definition for ‘uniquePrim’
    .aedge_glist: no visible global function definition for ‘intersectPrim’
    .aedge_glist: no visible global function definition for
     ‘removeRedundant’
    .aterm_glist: no visible global function definition for ‘isin’
    .aterm_glist: no visible global function definition for
     ‘removeRedundant’
    .cModel_finalize: no visible global function definition for ‘ugList’
    .cModel_finalize: no visible global function definition for
     ‘maxCliqueMAT’
    .cModel_finalize: no visible global function definition for ‘mcsMAT’
    .check.glist: no visible global function definition for ‘unlistPrim’
    .check.glist: no visible global function definition for ‘uniquePrim’
    .cov.wt: no visible global function definition for ‘colSumsPrim’
    .dModel_finalize: no visible global function definition for
     ‘isGSD_glist’
    .dModel_sparsity: no visible global function definition for
     ‘tableMargin’
    .delete.term: no visible global function definition for ‘isin’
    .delete.term: no visible global function definition for
     ‘removeRedundant’
    .drop.term_glist: no visible global function definition for ‘subsetof’
    .drop.term_glist: no visible global function definition for ‘combnPrim’
    .drop.term_glist: no visible global function definition for
     ‘unlistPrim’
    .drop.term_glist : <anonymous>: no visible global function definition
     for ‘subsetof’
    .drop.term_glist: no visible global function definition for
     ‘removeRedundant’
    .dterm_glist: no visible global function definition for ‘subsetof’
    .dterm_glist: no visible global function definition for ‘combnPrim’
    .dterm_glist: no visible global function definition for ‘unlistPrim’
    .dterm_glist : <anonymous>: no visible global function definition for
     ‘subsetof’
    .dterm_glist: no visible global function definition for
     ‘removeRedundant’
    .extendCGstats: no visible global function definition for ‘rowSumsPrim’
    .ghk2pmsParms: no visible global function definition for ‘solveSPD’
    .ghk2pmsParms: no visible global function definition for ‘colSumsPrim’
    .loglinDecDim: no visible global function definition for ‘tableMargin’
    .loglinDim: no visible global function definition for ‘unlistPrim’
    .loglinGenDim: no visible global function definition for ‘unlistPrim’
    .mModel_finalize: no visible global function definition for
     ‘isGSD_glist’
    .mModel_logLpms: no visible global function definition for ‘solveSPD’
    .mModelinfoPrimitive: no visible global function definition for
     ‘removeRedundant’
    .mmod_dimensionPrimitive: no visible global function definition for
     ‘glist2adjMAT’
    .normalize.ghkParms: no visible global function definition for
     ‘solveSPD’
    .normalize.ghkParms: no visible global function definition for
     ‘colSumsPrim’
    .pFormula2: no visible global function definition for ‘rhsFormula2list’
    .pFormula2: no visible global function definition for ‘maxCliqueMAT’
    .pFormula2: no visible global function definition for ‘as.adjMAT’
    .pFormula2: no visible global function definition for ‘uniquePrim’
    .parse.change.list : .foo: no visible global function definition for
     ‘rhsf2list’
    .parse.change.list : .foo: no visible binding for global variable
     ‘names2pairs’
    .parse.change.list: no visible global function definition for
     ‘matchPrim’
    .pms2ghkParms: no visible global function definition for ‘solveSPD’
    .pms2ghkParms: no visible global function definition for ‘colSumsPrim’
    .reduceSet: no visible global function definition for ‘isin’
    .rhsf2char: no visible global function definition for ‘rhsf2list’
    .set.interactions: no visible global function definition for
     ‘removeRedundant’
    .subtract.fix: no visible global function definition for ‘pairs2num’
    .subtract.fix: no visible global function definition for ‘matchPrim’
    .update.ghkParms: no visible global function definition for ‘tableOp2’
    .weak.datamarg.cont: no visible global function definition for
     ‘rowSumsPrim’
    .weak.datamarg.disc: no visible global function definition for
     ‘tableMargin’
    .weak.datamarg.mix: no visible global function definition for
     ‘tableMargin’
    .weak.datamarg.mix: no visible global function definition for
     ‘slice2entry’
    .weak.datamarg.mix: no visible global function definition for
     ‘rowSumsPrim’
    .weak.datamarg.mix: no visible global function definition for
     ‘nextCell’
    .weak.modelmarg.cont: no visible global function definition for
     ‘rowSumsPrim’
    .weak.modelmarg.disc: no visible global function definition for
     ‘tableMargin’
    .weak.modelmarg.mix: no visible global function definition for
     ‘tableMargin’
    .weak.modelmarg.mix: no visible global function definition for
     ‘slice2entry’
    .weak.modelmarg.mix: no visible global function definition for
     ‘rowSumsPrim’
    .weak.modelmarg.mix: no visible global function definition for
     ‘nextCell’
    backward: no visible global function definition for ‘isGSD_glist’
    backward: no visible global function definition for ‘glist2adjMAT’
    backward: no visible global function definition for ‘pairs2num’
    ciTest_df: no visible global function definition for ‘rhsFormula2list’
    ciTest_df: no visible global function definition for ‘uniquePrim’
    ciTest_mvn: no visible global function definition for ‘rhsFormula2list’
    ciTest_ordinal: no visible global function definition for
     ‘rhsFormula2list’
    ciTest_table: no visible global function definition for ‘tableMargin’
    ciTest_table: no visible global function definition for
     ‘rhsFormula2list’
    compareGC: no visible global function definition for ‘unlistPrim’
    compareGC : <anonymous>: no visible global function definition for
     ‘isin’
    compareGCpairs: no visible binding for global variable ‘combnPrim’
    dmod: no visible global function definition for ‘tableMargin’
    effloglin: no visible global function definition for ‘ugList’
    effloglin: no visible global function definition for ‘triangulateMAT’
    effloglin: no visible global function definition for ‘ripMAT’
    effloglin : <anonymous>: no visible global function definition for
     ‘tableMargin’
    effloglin: no visible global function definition for ‘uniquePrim’
    effloglin : <anonymous>: no visible global function definition for
     ‘parray’
    effloglin: no visible global function definition for ‘propagateLS’
    effloglin: no visible global function definition for ‘tableMargin’
    effloglin: no visible global function definition for ‘tableOp2’
    effloglin: no visible global function definition for ‘unlistPrim’
    effloglin: no visible global function definition for ‘tableOp’
    effloglin: no visible global function definition for ‘tablePerm’
    fit.dModel: no visible global function definition for ‘ripMAT’
    fit.dModel: no visible global function definition for ‘glist2adjMAT’
    fit.mModel: no visible global function definition for ‘rowSumsPrim’
    fit.mModel: no visible global function definition for ‘colwiseProd’
    forward: no visible global function definition for ‘isGSD_glist’
    forward: no visible global function definition for ‘glist2adjMAT’
    forward: no visible global function definition for ‘pairs2num’
    getEdges.graphNEL: no visible global function definition for
     ‘as.adjMAT’
    getEdges.list: no visible global function definition for ‘glist2adjMAT’
    getInEdgesMAT: no visible global function definition for ‘edgeListMAT’
    getInEdgesMAT: no visible global function definition for ‘mcsmarkedMAT’
    getOutEdgesMAT: no visible global function definition for
     ‘nonEdgeListMAT’
    getOutEdgesMAT: no visible global function definition for
     ‘mcsmarkedMAT’
    ggmfit: no visible global function definition for ‘uniquePrim’
    ggmfitr: no visible global function definition for ‘ellK’
    ghk2phkParms: no visible global function definition for ‘solveSPD’
    ghk2phkParms: no visible global function definition for ‘colSumsPrim’
    iplot.iModel: no visible global function definition for ‘ugList’
    loglinDecDim: no visible global function definition for ‘ripMAT’
    loglinDecDim: no visible global function definition for ‘glist2adjMAT’
    mmod: no visible global function definition for ‘intersectPrim’
    phk2ghkParms: no visible global function definition for ‘solveSPD’
    phk2ghkParms: no visible global function definition for ‘colSumsPrim’
    phk2pmsParms: no visible global function definition for ‘solveSPD’
    plot.iModel: no visible global function definition for ‘ugList’
    pms2phkParms: no visible global function definition for ‘solveSPD’
    stepwise.iModel: no visible global function definition for
     ‘isGSD_glist’
    summary.iModel: no visible global function definition for ‘getCliques’
    summary.iModel: no visible global function definition for ‘ugList’
    testInEdges: no visible global function definition for ‘glist2adjMAT’
    testOutEdges: no visible global function definition for ‘glist2adjMAT’
    testadd.iModel: no visible global function definition for
     ‘rhsFormula2list’
    testadd.iModel: no visible global function definition for
     ‘glist2adjMAT’
    testadd.iModel: no visible global function definition for ‘subsetof’
    testadd.iModel: no visible global function definition for
     ‘maxCliqueMAT’
    testadd.iModel: no visible global function definition for ‘mcsMAT’
    testadd.iModel: no visible global function definition for ‘isin’
    testadd.iModel: no visible global function definition for ‘setdiffPrim’
    testdelete.iModel: no visible global function definition for
     ‘rhsFormula2list’
    testdelete.iModel: no visible global function definition for
     ‘glist2adjMAT’
    testdelete.iModel: no visible global function definition for ‘subsetof’
    testdelete.iModel: no visible global function definition for
     ‘maxCliqueMAT’
    testdelete.iModel: no visible global function definition for ‘mcsMAT’
    testdelete.iModel: no visible global function definition for ‘isin’
    testdelete.iModel: no visible global function definition for
     ‘setdiffPrim’
    coerce,cModel-graphNEL: no visible global function definition for
     ‘ugList’
    coerce,cModel-igraph: no visible global function definition for
     ‘ugList’
    coerce,cModel-matrix: no visible global function definition for
     ‘ugList’
    coerce,dModel-graphNEL: no visible global function definition for
     ‘ugList’
    coerce,dModel-igraph: no visible global function definition for
     ‘ugList’
    coerce,dModel-matrix: no visible global function definition for
     ‘ugList’
    coerce,mModel-graphNEL: no visible global function definition for
     ‘ugList’
    coerce,mModel-igraph: no visible global function definition for
     ‘ugList’
    coerce,mModel-matrix: no visible global function definition for
     ‘ugList’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 0.1-17
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: gRbase
    Loading required package: gRain
    Loading required package: graph
    Loading required package: grid
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'gRim.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `a4wide.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    st/gRim/vignettes/gRim.tex:17: ==> Fatal error occurred, no output PDF file pr
    oduced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-mavericks