CRAN Package Check Results for Package gamclass

Last updated on 2015-08-05 03:48:03.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.55 7.48 105.50 112.98 NOTE
r-devel-linux-x86_64-debian-gcc 0.55 6.94 101.76 108.70 NOTE
r-devel-linux-x86_64-fedora-clang 0.55 221.31 NOTE
r-devel-linux-x86_64-fedora-gcc 0.55 215.42 NOTE
r-devel-osx-x86_64-clang 0.55 180.62 NOTE
r-devel-windows-ix86+x86_64 0.55 23.00 235.00 258.00 NOTE
r-patched-linux-x86_64 0.55 7.24 102.79 110.02 NOTE
r-patched-solaris-sparc 0.55 1302.50 NOTE
r-patched-solaris-x86 0.55 274.00 NOTE
r-release-linux-x86_64 0.55 7.44 106.05 113.49 NOTE
r-release-osx-x86_64-mavericks 0.55 WARN
r-release-windows-ix86+x86_64 0.55 23.00 215.00 238.00 NOTE
r-oldrel-windows-ix86+x86_64 0.55 27.00 273.00 300.00 OK

Check Details

Version: 0.55
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.55
Check: R code for possible problems
Result: NOTE
    CVcluster: no visible binding for global variable ‘na.omit’
    CVcluster : <anonymous>: no visible global function definition for
     ‘predict’
    CVcluster: no visible global function definition for ‘as.formula’
    CVgam: no visible global function definition for ‘predict’
    CVgam: no visible global function definition for ‘residuals’
    RFcluster: no visible global function definition for ‘as.formula’
    RFcluster: no visible global function definition for ‘model.response’
    RFcluster: no visible global function definition for ‘model.frame’
    RFcluster: no visible global function definition for ‘terms’
    RFcluster: no visible global function definition for ‘reformulate’
    addhlines: no visible global function definition for ‘lines’
    bootreg: no visible global function definition for ‘lm’
    bootreg: no visible global function definition for ‘resid’
    bootreg: no visible global function definition for ‘fitted’
    bootreg: no visible global function definition for ‘coef’
    bootreg: no visible global function definition for ‘delete.response’
    bootreg: no visible global function definition for ‘terms’
    bootreg: no visible global function definition for ‘as.formula’
    compareModels: no visible global function definition for ‘lm’
    compareModels: no visible global function definition for ‘predict’
    compareModels: no visible global function definition for ‘resid’
    eventCounts: no visible global function definition for ‘is’
    gamRF: no visible global function definition for ‘as.formula’
    gamRF: no visible global function definition for ‘resid’
    gamRF: no visible global function definition for ‘predict’
    matchedPairs : eachyear: no visible global function definition for
     ‘complete.cases’
    matchedPairs : eachyear: no visible global function definition for
     ‘na.omit’
    plotFars: no visible global function definition for ‘formula’
    simreg: no visible global function definition for ‘lm’
    simreg: no visible global function definition for ‘resid’
    simreg: no visible global function definition for ‘fitted’
    simreg: no visible global function definition for ‘coef’
    simreg: no visible global function definition for ‘as.formula’
    simreg: no visible global function definition for ‘delete.response’
    simreg: no visible global function definition for ‘terms’
    simreg: no visible global function definition for ‘rnorm’
    tabFarsDead: no visible global function definition for ‘data’
    tabFarsDead: no visible global function definition for ‘aggregate’
    Undefined global functions or variables:
     aggregate as.formula coef complete.cases data delete.response fitted
     formula is lines lm model.frame model.response na.omit predict
     reformulate resid residuals rnorm terms
    Consider adding
     importFrom("graphics", "lines")
     importFrom("methods", "is")
     importFrom("stats", "aggregate", "as.formula", "coef",
     "complete.cases", "delete.response", "fitted", "formula",
     "lm", "model.frame", "model.response", "na.omit", "predict",
     "reformulate", "resid", "residuals", "rnorm", "terms")
     importFrom("utils", "data")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.55
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: zoo
    
    Attaching package: 'zoo'
    
    The following objects are masked from 'package:base':
    
     as.Date, as.Date.numeric
    
    Loading required package: timeDate
    This is forecast 6.1
    
    Loading required package: rpart
    Loading required package: randomForest
    randomForest 4.6-10
    Type rfNews() to see new features/changes/bug fixes.
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running ‘texi2dvi’ on ‘figs8.tex’ failed.
    LaTeX errors:
    ! LaTeX Error: Unknown float option `H'.
    
    See the LaTeX manual or LaTeX Companion for explanation.
    Type H <return> for immediate help.
     ...
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.55
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘Ecdat’
Flavor: r-release-osx-x86_64-mavericks

Version: 0.55
Check: running R code from vignettes
Result: WARN
    Errors in running code in vignettes:
    when running code in ‘figs2.Rnw’
     ...
    + gph <- fig2.2()
    + update(gph, main = list("2.2: Wage data, broken down by worker",
    + fontface = "plain"))
    + }
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘Ecdat’
    
     When sourcing ‘figs2.R’:
    Error: subscript out of bounds
    Execution halted
    when running code in ‘figs6.Rnw’
     ...
    + if (!require(sp))
    + .... [TRUNCATED]
    Will try to load dataset 'meuse' from package 'sp'Loading required package: sp
    Will try to load dataset 'Electricity' from package 'Ecdat'Loading required package: Ecdat
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘Ecdat’
    
     When sourcing ‘figs6.R’:
    Error: Package 'Ecdat' is not installed
    Execution halted
Flavor: r-release-osx-x86_64-mavericks

Version: 0.55
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: latticeExtra
    Loading required package: RColorBrewer
    Loading required package: DAAGbio
    Loading required package: limma
    Loading required package: oz
    Loading required package: ape
    Quitting from lines 252-255 (figs2.Rnw)
    Error: processing vignette 'figs2.Rnw' failed with diagnostics:
    subscript out of bounds
    Execution halted
Flavor: r-release-osx-x86_64-mavericks