CRAN Package Check Results for Package genoPlotR

Last updated on 2015-02-01 16:46:58.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.8.2 1.01 68.84 69.86 NOTE
r-devel-linux-x86_64-debian-gcc 0.8.2 0.98 67.12 68.10 NOTE
r-devel-linux-x86_64-fedora-clang 0.8.2 149.46 NOTE
r-devel-linux-x86_64-fedora-gcc 0.8.2 134.86 NOTE
r-devel-osx-x86_64-clang 0.8.2 135.32 NOTE
r-devel-windows-ix86+x86_64 0.8.2 7.00 96.00 103.00 NOTE
r-patched-linux-x86_64 0.8.2 1.16 80.77 81.93 NOTE
r-patched-solaris-sparc 0.8.2 913.70 NOTE
r-patched-solaris-x86 0.8.2 170.30 NOTE
r-release-linux-ix86 0.8.2 1.79 93.90 95.70 NOTE
r-release-linux-x86_64 0.8.2 1.12 81.62 82.73 NOTE
r-release-osx-x86_64-mavericks 0.8.2 NOTE
r-release-osx-x86_64-snowleopard 0.8.2 OK
r-release-windows-ix86+x86_64 0.8.2 4.00 119.00 123.00 NOTE
r-oldrel-windows-ix86+x86_64 0.8.2 5.00 95.00 100.00 NOTE

Check Details

Version: 0.8.2
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘ade4’ ‘grid’ ‘methods’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 0.8.2
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     trim.seg_plot
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 0.8.2
Check: R code for possible problems
Result: NOTE
    annotation_grob: no visible global function definition for ‘gList’
    comparison_grob: no visible global function definition for ‘gList’
    dna_seg_grob: no visible global function definition for ‘gList’
    dna_seg_label_grob: no visible global function definition for ‘gList’
    dna_seg_label_grob: no visible global function definition for
     ‘textGrob’
    dna_seg_label_grob: no visible global function definition for ‘gpar’
    dna_seg_label_grob: no visible global function definition for ‘unit’
    dna_seg_label_grob: no visible global function definition for ‘gTree’
    dna_seg_label_grob: no visible global function definition for
     ‘viewport’
    dna_seg_scale_grob: no visible global function definition for ‘gList’
    dna_seg_scale_grob: no visible global function definition for
     ‘segmentsGrob’
    dna_seg_scale_grob: no visible global function definition for ‘gpar’
    dna_seg_scale_grob: no visible global function definition for
     ‘textGrob’
    gap_grob: no visible global function definition for ‘segmentsGrob’
    gap_grob: no visible global function definition for ‘gpar’
    gene_grob: no visible global function definition for ‘polygonGrob’
    gene_grob: no visible global function definition for ‘gpar’
    gene_grob: no visible global function definition for ‘segmentsGrob’
    gene_grob: no visible global function definition for ‘pointsGrob’
    gene_grob: no visible global function definition for ‘unit’
    gene_grob: no visible global function definition for ‘textGrob’
    gene_grob: no visible global function definition for ‘is.grob’
    gene_grob: no visible binding for global variable ‘is.grob’
    label_grob: no visible global function definition for ‘gList’
    label_grob: no visible global function definition for ‘linesGrob’
    label_grob: no visible global function definition for ‘gpar’
    label_grob: no visible global function definition for ‘textGrob’
    permute_tree: no visible global function definition for ‘enum.phylog’
    phylog_grob: no visible global function definition for ‘gList’
    phylog_grob: no visible global function definition for ‘textGrob’
    phylog_grob: no visible global function definition for ‘gpar’
    phylog_grob: no visible global function definition for ‘segmentsGrob’
    phylog_grob: no visible global function definition for ‘unit’
    phylog_grob: no visible global function definition for ‘nullGrob’
    phylog_grob: no visible global function definition for ‘gTree’
    phylog_grob: no visible global function definition for ‘viewport’
    phylog_grob: no visible global function definition for ‘grid.layout’
    phylog_grob: no visible global function definition for ‘unit.c’
    phylog_grob: no visible global function definition for ‘frameGrob’
    phylog_grob: no visible global function definition for ‘placeGrob’
    plot_gene_map: no visible global function definition for ‘unit’
    plot_gene_map: no visible global function definition for ‘textGrob’
    plot_gene_map: no visible global function definition for ‘gpar’
    plot_gene_map: no visible global function definition for ‘grid.newpage’
    plot_gene_map: no visible global function definition for ‘pushViewport’
    plot_gene_map: no visible global function definition for ‘viewport’
    plot_gene_map: no visible global function definition for ‘grid.layout’
    plot_gene_map: no visible global function definition for ‘grid.draw’
    plot_gene_map: no visible global function definition for ‘upViewport’
    plot_gene_map: no visible global function definition for ‘unit.c’
    plot_gene_map: no visible global function definition for
     ‘grid.segments’
    scale_grob: no visible global function definition for ‘gList’
    scale_grob: no visible global function definition for ‘segmentsGrob’
    scale_grob: no visible global function definition for ‘textGrob’
    similarity_grob: no visible global function definition for
     ‘polygonGrob’
    similarity_grob: no visible global function definition for ‘gpar’
    yaxis_grob: no visible global function definition for ‘gList’
    yaxis_grob: no visible global function definition for ‘segmentsGrob’
    yaxis_grob: no visible global function definition for ‘unit’
    yaxis_grob: no visible global function definition for ‘textGrob’
    yaxis_grob: no visible global function definition for ‘gpar’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.8.2
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘ade4’ ‘grid’ ‘methods’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.8.2
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     'ade4' 'methods'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
Flavor: r-oldrel-windows-ix86+x86_64