CRAN Package Check Results for Package genridge

Last updated on 2014-11-28 12:46:47.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.6-5 0.84 20.87 21.71 OK
r-devel-linux-x86_64-debian-gcc 0.6-5 0.87 20.30 21.17 OK
r-devel-linux-x86_64-fedora-clang 0.6-5 44.60 OK
r-devel-linux-x86_64-fedora-gcc 0.6-5 46.64 OK
r-devel-osx-x86_64-clang 0.6-5 36.86 OK
r-devel-windows-ix86+x86_64 0.6-5 3.00 33.00 36.00 OK
r-patched-linux-x86_64 0.6-5 0.90 23.02 23.92 OK
r-patched-solaris-sparc 0.6-5 198.10 OK
r-patched-solaris-x86 0.6-5 49.40 OK
r-release-linux-ix86 0.6-3 1.16 30.94 32.09 NOTE
r-release-linux-x86_64 0.6-5 0.94 21.24 22.17 OK
r-release-osx-x86_64-mavericks 0.6-5 OK
r-release-osx-x86_64-snowleopard 0.6-5 ERROR
r-release-windows-ix86+x86_64 0.6-5 4.00 36.00 40.00 OK
r-oldrel-windows-ix86+x86_64 0.6-5 3.00 47.00 50.00 OK

Check Details

Version: 0.6-3
Check: for hidden files and directories
Result: NOTE
    Found the following hidden files and directories:
     .project
    These were most likely included in error. See section ‘Package
    structure’ in the ‘Writing R Extensions’ manual.
Flavor: r-release-linux-ix86

Version: 0.6-3
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘car’ which was already attached by Depends.
     Please remove these calls from your code.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-release-linux-ix86

Version: 0.6-3
Check: R code for possible problems
Result: NOTE
    plot3d.ridge : ellipsoid: no visible global function definition for
     ‘asEuclidean’
    plot3d.ridge : ellipsoid: no visible global function definition for
     ‘qmesh3d’
    plot3d.ridge : ellipsoid: no visible global function definition for
     ‘shade3d’
    plot3d.ridge : ellipsoid: no visible global function definition for
     ‘wire3d’
    plot3d.ridge : ellipsoid: no visible global function definition for
     ‘texts3d’
    plot3d.ridge : ellipsoid: no visible global function definition for
     ‘par3d’
    plot3d.ridge: no visible global function definition for ‘open3d’
    plot3d.ridge: no visible global function definition for ‘lines3d’
    plot3d.ridge: no visible global function definition for ‘points3d’
    plot3d.ridge: no visible global function definition for ‘aspect3d’
    plot3d.ridge: no visible global function definition for ‘par3d’
    plot3d.ridge: no visible global function definition for ‘decorate3d’
    plot3d.ridge: no visible global function definition for ‘axis3d’
    plot3d.ridge: no visible global function definition for ‘mtext3d’
    plot3d.ridge: no visible global function definition for ‘box3d’
Flavor: r-release-linux-ix86

Version: 0.6-5
Check: examples
Result: ERROR
    Running examples in ‘genridge-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: Detroit
    > ### Title: Detroit Homicide Data for 1961-1973
    > ### Aliases: Detroit
    > ### Keywords: datasets
    >
    > ### ** Examples
    >
    > data(Detroit)
    >
    > # Work with a subset of predictors, from Miller (2002, Table 3.14),
    > # the "best" 6 variable model
    > # Variables: Police, Unemp, GunLic, HClear, WhMale, WkEarn
    > # Scale these for comparison with other methods
    >
    > Det <- as.data.frame(scale(Detroit[,c(1,2,4,6,7,11)]))
    > Det <- cbind(Det, Homicide=Detroit[,"Homicide"])
    >
    > # use the formula interface; specify ridge constants in terms
    > # of equivalent degrees of freedom
    > dridge <- ridge(Homicide~., data=Det, df=seq(6,4,-.5))
    >
    > # univariate trace plots are seemingly paradoxical in that
    > # some coefficients "shrink" *away* from 0
    > traceplot(dridge, X="df")
    > vif(dridge)
     Police Unemp GunLic HClear WhMale WkEarn
    0.00000000 24.813319 4.857380 19.272306 46.922906 56.711341 54.716585
    0.03901941 20.118936 3.869947 11.362456 33.071940 35.390343 31.882644
    0.10082082 15.414725 2.970643 6.431731 21.289465 20.775894 17.352584
    0.20585744 10.776320 2.207891 3.597306 12.171334 11.258278 8.750494
    0.40331592 6.534224 1.622736 2.128409 5.995951 5.503441 4.113455
    > pairs(dridge, radius=0.5)
    >
    > plot3d(dridge, radius=0.5, labels=dridge$df)
    Loading required package: rgl
    
    Attaching package: ‘rgl’
    
    The following object is masked from ‘package:genridge’:
    
     plot3d
    
    Thu Nov 27 10:53:43 hagal.research.att.com R[10060] <Error>: unknown error code: invalid pixel format
    Thu Nov 27 10:53:43 hagal.research.att.com R[10060] <Error>: kCGErrorFailure: Set a breakpoint @ CGErrorBreakpoint() to catch errors as they are logged.
    X Error of failed request: GLXBadContext
     Major opcode of failed request: 0 ()
     Serial number of failed request: 27
     Current serial number in output stream: 27
Flavor: r-release-osx-x86_64-snowleopard