Last updated on 2023-11-28 23:04:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 4.0.6 | 28.96 | 293.17 | 322.13 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 4.0.6 | 20.97 | 238.59 | 259.56 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 4.0.6 | 396.80 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 4.0.6 | 418.24 | OK | |||
| r-devel-windows-x86_64 | 4.0.6 | 21.00 | 267.00 | 288.00 | OK | |
| r-patched-linux-x86_64 | 4.0.6 | 30.91 | 308.68 | 339.59 | OK | |
| r-release-linux-x86_64 | 4.0.6 | 17.20 | 303.75 | 320.95 | OK | |
| r-release-macos-arm64 | 4.0.6 | 139.00 | OK | |||
| r-release-macos-x86_64 | 4.0.6 | 294.00 | OK | |||
| r-release-windows-x86_64 | 4.0.6 | 31.00 | 334.00 | 365.00 | OK | |
| r-oldrel-macos-arm64 | 4.0.6 | 119.00 | OK | |||
| r-oldrel-macos-x86_64 | 4.0.6 | 157.00 | OK | |||
| r-oldrel-windows-x86_64 | 4.0.6 | 31.00 | 316.00 | 347.00 | OK |
Version: 4.0.6
Check: Rd files
Result: NOTE
checkRd: (-1) bilat.symmetry.Rd:40: Lost braces; missing escapes or markup?
40 | symmetry {=TRUE} or matching symmetry {=FALSE}}
| ^
checkRd: (-1) bilat.symmetry.Rd:40: Lost braces; missing escapes or markup?
40 | symmetry {=TRUE} or matching symmetry {=FALSE}}
| ^
checkRd: (-1) bilat.symmetry.Rd:128: Lost braces; missing escapes or markup?
128 | Analyses of symmetry for matched pairs of objects is implemented when {object.sym=FALSE}. Here,
| ^
checkRd: (-1) bilat.symmetry.Rd:139: Lost braces; missing escapes or markup?
139 | Analyses of object symmetry is implemented when {object.sym=TRUE}. Here, a 3D array [p x k x n]
| ^
checkRd: (-1) compare.evol.rates.Rd:20: Lost braces; missing escapes or markup?
20 | \item{phy}{A phylogenetic tree of {class phylo} - see \code{\link[ape]{read.tree}} in library ape}
| ^
checkRd: (-1) compare.multi.evol.rates.Rd:22: Lost braces; missing escapes or markup?
22 | \item{phy}{A phylogenetic tree of {class phylo} - see \code{\link[ape]{read.tree}} in library ape}
| ^
checkRd: (-1) gm.prcomp.Rd:58: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:59-60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:61-64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:65-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:75: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:76: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:77-78: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:91-92: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:93-95: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:96-100: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:101-104: Lost braces in \itemize; meant \describe ?
checkRd: (-1) gm.prcomp.Rd:197: Lost braces
197 | \code{\link{ordinate}}{ A more bare-bones ordination function on which gm.prcomp depends.}
| ^
checkRd: (-1) integration.Vrel.Rd:12: Lost braces; missing escapes or markup?
12 | \item{phy}{A phylogenetic tree of {class phylo} - see \code{\link[ape]{read.tree}} in library ape}
| ^
checkRd: (-1) phylo.integration.Rd:22: Lost braces; missing escapes or markup?
22 | \item{phy}{A phylogenetic tree of {class phylo} - see \code{\link[ape]{read.tree}} in library ape}
| ^
checkRd: (-1) phylo.modularity.Rd:23: Lost braces; missing escapes or markup?
23 | \item{phy}{A phylogenetic tree of {class phylo} - see \code{\link[ape]{read.tree}} in library ape}
| ^
checkRd: (-1) physignal.Rd:12: Lost braces; missing escapes or markup?
12 | \item{phy}{A phylogenetic tree of {class phylo} - see \code{\link[ape]{read.tree}} in library ape}
| ^
checkRd: (-1) physignal.z.Rd:22: Lost braces; missing escapes or markup?
22 | \item{phy}{A phylogenetic tree of {class phylo} - see \code{\link[ape]{read.tree}} in library ape}
| ^
checkRd: (-1) physignal.z.Rd:113-118: Lost braces in \itemize; meant \describe ?
checkRd: (-1) physignal.z.Rd:119-122: Lost braces in \itemize; meant \describe ?
checkRd: (-1) physignal.z.Rd:123-129: Lost braces in \itemize; meant \describe ?
checkRd: (-1) physignal.z.Rd:130-132: Lost braces in \itemize; meant \describe ?
checkRd: (-1) physignal.z.Rd:133-135: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plotRefToTarget.Rd:27: Lost braces; missing escapes or markup?
27 | \item{mesh}{A mesh3d object for use with {method="surface"}}
| ^
checkRd: (-1) plotRefToTarget.Rd:43: Lost braces; missing escapes or markup?
43 | \item{useRefPts}{An option (logical value) to use reference configuration points rather than target configuration points (when {method = "TPS"})}
| ^
checkRd: (-1) plotRefToTarget.Rd:55: Lost braces; missing escapes or markup?
55 | specimen. The option {mag} allows the user to indicates the degree of magnification to be used when
| ^
checkRd: (-1) plotRefToTarget.Rd:78: Lost braces; missing escapes or markup?
78 | Requires mesh3d object in option {mesh}, made using \code{\link{warpRefMesh}}.
| ^
checkRd: (-1) plotRefToTarget.Rd:48: Lost braces; missing escapes or markup?
48 | If using {method="surface"}, function will return the warped mesh3d object.
| ^
checkRd: (-1) plotspec.Rd:23: Lost braces; missing escapes or markup?
23 | \item{fixed}{Numeric The number of fixed template landmarks (listed first in {digitspec})}
| ^
checkRd: (-1) plotspec.Rd:31: Lost braces; missing escapes or markup?
31 | \item{centered}{Logical Whether the data matrix is in the surface mesh coordinate system ({centered = FALSE}) or
| ^
checkRd: (-1) plotspec.Rd:32: Lost braces; missing escapes or markup?
32 | if the data were collected after the mesh was centered ({centered = TRUE})- see details.}
| ^
checkRd: (-1) plotspec.Rd:45: Lost braces; missing escapes or markup?
45 | Therefore use this function with {centered=TRUE}. Data collected outside geomorph should be read using
| ^
checkRd: (-1) plotspec.Rd:46: Lost braces; missing escapes or markup?
46 | {centered=FALSE}. The function assumes the fixed landmarks are listed at the beginning of
| ^
checkRd: (-1) plotspec.Rd:47: Lost braces; missing escapes or markup?
47 | the coordinate matrix ({digitspec}).
| ^
checkRd: (-1) procD.pgls.Rd:25: Lost braces; missing escapes or markup?
25 | \item{phy}{A phylogenetic tree of {class phylo} - see \code{\link[ape]{read.tree}} in library ape}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc