CRAN Package Check Results for Package glmmBUGS

Last updated on 2017-10-18 08:48:13.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.4.0 1.32 34.38 35.69 OK
r-devel-linux-x86_64-debian-gcc 2.4.0 1.63 36.44 38.07 OK
r-devel-linux-x86_64-fedora-clang 2.4.0 65.12 OK
r-devel-linux-x86_64-fedora-gcc 2.4.0 66.17 OK
r-devel-windows-ix86+x86_64 2.4.0 9.00 63.00 72.00 OK
r-patched-linux-x86_64 2.4.0 1.31 33.24 34.55 OK
r-patched-solaris-x86 2.4.0 86.00 NOTE
r-release-linux-x86_64 2.4.0 1.41 33.39 34.80 OK
r-release-windows-ix86+x86_64 2.4.0 6.00 82.00 88.00 OK
r-release-osx-x86_64 2.4.0 ERROR
r-oldrel-windows-ix86+x86_64 2.4.0 5.00 81.00 86.00 OK
r-oldrel-osx-x86_64 2.4.0 ERROR

Check Details

Version: 2.4.0
Check: package dependencies
Result: NOTE
    Package which this enhances but not available for checking: ‘BRugs’
Flavors: r-patched-solaris-x86, r-oldrel-osx-x86_64

Version: 2.4.0
Check: package dependencies
Result: NOTE
    Packages which this enhances but not available for checking:
     ‘BRugs’ ‘R2jags’ ‘rjags’
Flavor: r-release-osx-x86_64

Version: 2.4.0
Check: tests
Result: ERROR
     Running ‘bym.R’ [4s/6s]
    Running the tests in ‘tests/bym.R’ failed.
    Last 13 lines of output:
     + checkChain(kParams, c("intercept", "SDCountySpatial"))
     + dev.off()
     +
     + kentucky = mergeBugsData(kentucky, kSummary)
     +
     + if(require('sp', quietly=TRUE)) {
     + pdf("spplotBym.pdf",height=4,width=8)
     + print(spplot(kentucky, "FittedRateCounty.mean"))
     + dev.off()
     + }
     +
     + }
     Error in R2OpenBUGS::bugs(forBugs$ragged, inits = int2, model.file = "bym.txt", :
     Cannot find the OpenBUGS program
     Execution halted
Flavor: r-release-osx-x86_64

Version: 2.4.0
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    (/usr/local/texlive/2016basic/texmf-dist/tex/generic/oberdiek/infwarerr.sty)
    (/usr/local/texlive/2016basic/texmf-dist/tex/generic/oberdiek/ltxcmds.sty))))
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty
    Style option: `fancyvrb' v2.7a, with DG/SPQR fixes, and firstline=lastline fix
    <2008/02/07> (tvz))
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/base/textcomp.sty
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/base/ts1enc.def))
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/base/fontenc.sty
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/base/t1enc.def))
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/ae/ae.sty
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/base/fontenc.sty
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/base/t1enc.def)
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/ae/t1aer.fd))))
    No file jags.aux.
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/base/ts1cmr.fd)
    *geometry* driver: auto-detecting
    *geometry* detected driver: xetex
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/ae/t1aett.fd)
    (/Library/Frameworks/R.framework/Resources/share/texmf/tex/latex/ts1aett.fd)
    (/usr/local/texlive/2016basic/texmf-dist/tex/latex/base/ts1cmtt.fd) [1]Syntax Error: Invalid page count 0
    Syntax Error: Cannot allocate page cache
    make: *** [jags.pdf] Segmentation fault: 11
    Error in buildVignettes(dir = "/Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.4/glmmBUGS.Rcheck/vign_test/glmmBUGS") :
     running 'make' failed
    Execution halted
Flavor: r-release-osx-x86_64

Version: 2.4.0
Check: tests
Result: ERROR
    Running the tests in ‘tests/bym.R’ failed.
    Last 13 lines of output:
     +
     + kentucky = mergeBugsData(kentucky, kSummary)
     +
     + if(require('sp', quietly=TRUE)) {
     + pdf("spplotBym.pdf",height=4,width=8)
     + print(spplot(kentucky, "FittedRateCounty.mean"))
     + dev.off()
     + }
     +
     + }
     Error in R2OpenBUGS::bugs(forBugs$ragged, inits = int2, model.file = "bym.txt", :
     Cannot find the OpenBUGS program
     Execution halted
Flavor: r-oldrel-osx-x86_64