CRAN Package Check Results for Package glmulti

Last updated on 2015-07-06 14:48:36.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.7 1.49 21.21 22.70 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.7 1.32 20.70 22.02 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.7 44.79 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.7 43.48 NOTE
r-devel-osx-x86_64-clang 1.0.7 40.43 NOTE
r-devel-windows-ix86+x86_64 1.0.7 6.00 32.00 38.00 NOTE
r-patched-linux-x86_64 1.0.7 1.36 22.16 23.52 NOTE
r-patched-solaris-sparc 1.0.7 265.70 NOTE
r-patched-solaris-x86 1.0.7 69.30 NOTE
r-release-linux-x86_64 1.0.7 1.35 21.32 22.67 NOTE
r-release-osx-x86_64-mavericks 1.0.7 NOTE
r-release-windows-ix86+x86_64 1.0.7 7.00 33.00 40.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0.7 9.00 42.00 51.00 NOTE

Check Details

Version: 1.0.7
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘methods’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.7
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘plot.glmulti’
    Found the platform-specific device:
     ‘windows’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    coef.glmulti: no visible global function definition for ‘coef’
    coef.glmulti : <anonymous>: no visible global function definition for
     ‘qt’
    coef.glmulti: no visible global function definition for ‘qnorm’
    coef.glmulti: no visible global function definition for ‘qt’
    plot.glmulti: no visible global function definition for ‘plot’
    plot.glmulti: no visible global function definition for ‘abline’
    plot.glmulti: no visible global function definition for ‘par’
    plot.glmulti : <anonymous>: no visible global function definition for
     ‘delete.response’
    plot.glmulti : <anonymous>: no visible global function definition for
     ‘terms’
    plot.glmulti: no visible global function definition for ‘barplot’
    predict.glmulti: no visible global function definition for ‘predict’
    predict.glmulti : <anonymous>: no visible global function definition
     for ‘qt’
    predict.glmulti: no visible global function definition for ‘qnorm’
    predict.glmulti: no visible global function definition for ‘qt’
    aic,ANY: no visible global function definition for ‘logLik’
    aicc,ANY: no visible global function definition for ‘logLik’
    aicc,ANY: no visible global function definition for ‘nobs’
    bic,ANY: no visible global function definition for ‘logLik’
    bic,ANY: no visible global function definition for ‘nobs’
    consensus,list : <anonymous>: no visible global function definition for
     ‘as.formula’
    getfit,coxph: no visible global function definition for ‘logLik’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘model.frame’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘as.formula’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘logLik’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘flush.console’
    glmulti,character-character-ANY-ANY : <anonymous>: no visible global
     function definition for ‘as.formula’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘plot’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘abline’
    glmulti,character-character-ANY-ANY: no visible binding for global
     variable ‘as.formula’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘regsubsets’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘resid’
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘lm’
    glmulti,character-missing-ANY-missing: no visible global function
     definition for ‘as.formula’
    glmulti,formula-missing-ANY-missing: no visible global function
     definition for ‘terms’
    glmulti,formula-missing-ANY-missing: no visible global function
     definition for ‘as.formula’
    glmulti,glm-missing-ANY-missing: no visible global function definition
     for ‘formula’
    glmulti,list-ANY-ANY-ANY: no visible global function definition for
     ‘flush.console’
    glmulti,list-ANY-ANY-ANY : modeval: no visible global function
     definition for ‘terms’
    glmulti,list-ANY-ANY-ANY : modeval: no visible global function
     definition for ‘formula’
    glmulti,list-ANY-ANY-ANY : modeval: no visible global function
     definition for ‘logLik’
    glmulti,list-ANY-ANY-ANY: no visible binding for global variable
     ‘as.formula’
    glmulti,lm-missing-ANY-missing: no visible global function definition
     for ‘formula’
    qaic,ANY: no visible global function definition for ‘logLik’
    qaicc,ANY: no visible global function definition for ‘logLik’
    qaicc,ANY: no visible global function definition for ‘nobs’
    write,glmulti: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     abline as.formula barplot coef delete.response flush.console formula
     lm logLik model.frame nobs par plot predict qnorm qt regsubsets resid
     terms write.table
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.7
Check: Rd line widths
Result: NOTE
    Rd file 'glmulti.Rd':
     \usage lines wider than 90 characters:
     glmulti(y, xr, data, exclude = c(), name = "glmulti.analysis", intercept = TRUE, marginality = FALSE, bunch=30, chunk = 1, chunks = 1,
     level = 2, minsize = 0, maxsize = -1, minK = 0, maxK = -1, method = "h", crit = "aic", confsetsize = 100, popsize = 100 ... [TRUNCATED]
     \examples lines wider than 100 characters:
     # It explains the general approach and shows how to use glmulti with mixed models from the lme4 package.
     # this procedure allows support of arbitrarily any fitting function, or the use of sophisticated constraints on the model structure
    
    Rd file 'write.Rd':
     \usage lines wider than 90 characters:
     write(x, file = "data", ncolumns = if (is.character(x)) 1 else 5, append = FALSE, sep = " ")
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.7
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘plot.glmulti’
    Found the platform-specific device:
     ‘windows’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘regsubsets’
    Undefined global functions or variables:
     regsubsets
Flavor: r-devel-osx-x86_64-clang

Version: 1.0.7
Check: R code for possible problems
Result: NOTE
    coef.glmulti: no visible global function definition for 'coef'
    coef.glmulti : <anonymous>: no visible global function definition for
     'qt'
    coef.glmulti: no visible global function definition for 'qnorm'
    coef.glmulti: no visible global function definition for 'qt'
    plot.glmulti: no visible global function definition for 'plot'
    plot.glmulti: no visible global function definition for 'abline'
    plot.glmulti: no visible global function definition for 'windows'
    plot.glmulti: no visible global function definition for 'par'
    plot.glmulti : <anonymous>: no visible global function definition for
     'delete.response'
    plot.glmulti : <anonymous>: no visible global function definition for
     'terms'
    plot.glmulti: no visible global function definition for 'barplot'
    predict.glmulti: no visible global function definition for 'predict'
    predict.glmulti : <anonymous>: no visible global function definition
     for 'qt'
    predict.glmulti: no visible global function definition for 'qnorm'
    predict.glmulti: no visible global function definition for 'qt'
    aic,ANY: no visible global function definition for 'logLik'
    aicc,ANY: no visible global function definition for 'logLik'
    aicc,ANY: no visible global function definition for 'nobs'
    bic,ANY: no visible global function definition for 'logLik'
    bic,ANY: no visible global function definition for 'nobs'
    consensus,list : <anonymous>: no visible global function definition for
     'as.formula'
    getfit,coxph: no visible global function definition for 'logLik'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'model.frame'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'as.formula'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'logLik'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'flush.console'
    glmulti,character-character-ANY-ANY : <anonymous>: no visible global
     function definition for 'as.formula'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'plot'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'abline'
    glmulti,character-character-ANY-ANY: no visible binding for global
     variable 'as.formula'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'regsubsets'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'resid'
    glmulti,character-character-ANY-ANY: no visible global function
     definition for 'lm'
    glmulti,character-missing-ANY-missing: no visible global function
     definition for 'as.formula'
    glmulti,formula-missing-ANY-missing: no visible global function
     definition for 'terms'
    glmulti,formula-missing-ANY-missing: no visible global function
     definition for 'as.formula'
    glmulti,glm-missing-ANY-missing: no visible global function definition
     for 'formula'
    glmulti,list-ANY-ANY-ANY: no visible global function definition for
     'flush.console'
    glmulti,list-ANY-ANY-ANY : modeval: no visible global function
     definition for 'terms'
    glmulti,list-ANY-ANY-ANY : modeval: no visible global function
     definition for 'formula'
    glmulti,list-ANY-ANY-ANY : modeval: no visible global function
     definition for 'logLik'
    glmulti,list-ANY-ANY-ANY: no visible binding for global variable
     'as.formula'
    glmulti,lm-missing-ANY-missing: no visible global function definition
     for 'formula'
    qaic,ANY: no visible global function definition for 'logLik'
    qaicc,ANY: no visible global function definition for 'logLik'
    qaicc,ANY: no visible global function definition for 'nobs'
    write,glmulti: no visible global function definition for 'write.table'
    Undefined global functions or variables:
     abline as.formula barplot coef delete.response flush.console formula
     lm logLik model.frame nobs par plot predict qnorm qt regsubsets resid
     terms windows write.table
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0.7
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘plot.glmulti’
    Found the platform-specific device:
     ‘windows’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘regsubsets’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0.7
Check: R code for possible problems
Result: NOTE
    glmulti,character-character-ANY-ANY: no visible global function
     definition for ‘regsubsets’
Flavors: r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64