CRAN Package Check Results for Package gplots

Last updated on 2015-07-29 10:47:41.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.17.0 0.98 39.96 40.93 NOTE
r-devel-linux-x86_64-debian-gcc 2.17.0 1.10 37.91 39.01 NOTE
r-devel-linux-x86_64-fedora-clang 2.17.0 77.95 NOTE
r-devel-linux-x86_64-fedora-gcc 2.17.0 76.08 NOTE
r-devel-osx-x86_64-clang 2.17.0 66.72 NOTE
r-devel-windows-ix86+x86_64 2.17.0 3.00 60.00 63.00 NOTE
r-patched-linux-x86_64 2.17.0 1.39 38.03 39.42 NOTE
r-patched-solaris-sparc 2.17.0 475.70 NOTE
r-patched-solaris-x86 2.17.0 98.10 NOTE
r-release-linux-x86_64 2.17.0 1.06 38.62 39.68 NOTE
r-release-osx-x86_64-mavericks 2.17.0 OK
r-release-windows-ix86+x86_64 2.17.0 5.00 65.00 70.00 OK
r-oldrel-windows-ix86+x86_64 2.17.0 8.00 75.00 83.00 OK

Check Details

Version: 2.17.0
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     boxplot.n plot.lm2
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 2.17.0
Check: R code for possible problems
Result: NOTE
    balloonplot.default: no visible global function definition for
     ‘strwidth’
    balloonplot.default: no visible global function definition for
     ‘strheight’
    balloonplot.default: no visible global function definition for ‘par’
    balloonplot.default : myscale: no visible global function definition
     for ‘par’
    balloonplot.default: no visible global function definition for ‘plot’
    balloonplot.default: no visible global function definition for ‘text’
    balloonplot.default: no visible global function definition for ‘rect’
    balloonplot.default: no visible global function definition for
     ‘segments’
    balloonplot.default: no visible global function definition for ‘title’
    bandplot.default : CL: no visible global function definition for ‘var’
    bandplot.default: no visible global function definition for ‘lines’
    barplot2.default: no visible global function definition for ‘par’
    barplot2.default: no visible global function definition for
     ‘heat.colors’
    barplot2.default: no visible global function definition for ‘plot.new’
    barplot2.default: no visible global function definition for
     ‘plot.window’
    barplot2.default: no visible global function definition for ‘rect’
    barplot2.default: no visible global function definition for ‘axTicks’
    barplot2.default: no visible global function definition for ‘abline’
    barplot2.default : xyrect: no visible global function definition for
     ‘rect’
    barplot2.default: no visible global function definition for ‘segments’
    barplot2.default: no visible global function definition for ‘axis’
    barplot2.default: no visible global function definition for ‘xinch’
    barplot2.default: no visible global function definition for ‘yinch’
    barplot2.default: no visible global function definition for ‘legend’
    barplot2.default: no visible global function definition for ‘title’
    boxplot2: no visible global function definition for ‘par’
    boxplot2: no visible global function definition for ‘text’
    ci2d: no visible global function definition for ‘topo.colors’
    ci2d: no visible global function definition for ‘par’
    ci2d: no visible global function definition for ‘image’
    ci2d: no visible global function definition for ‘points’
    ci2d : plot.title: no visible global function definition for ‘points’
    ci2d: no visible global function definition for ‘filled.contour’
    ci2d: no visible global function definition for ‘title’
    ci2d: no visible global function definition for ‘axis’
    ci2d: no visible global function definition for ‘contour’
    ci2d: no visible global function definition for ‘contourLines’
    col2hex: no visible global function definition for ‘col2rgb’
    col2hex: no visible global function definition for ‘rgb’
    colorpanel: no visible global function definition for ‘col2rgb’
    colorpanel: no visible global function definition for ‘rgb’
    drawVennDiagram: no visible global function definition for ‘plot.new’
    drawVennDiagram: no visible global function definition for
     ‘plot.window’
    drawVennDiagram : circle: no visible global function definition for
     ‘polygon’
    drawVennDiagram: no visible global function definition for ‘text’
    drawVennDiagram: no visible global function definition for ‘polygon’
    heatmap.2: no visible binding for global variable ‘dist’
    heatmap.2: no visible binding for global variable ‘hclust’
    heatmap.2: no visible global function definition for ‘par’
    heatmap.2: no visible global function definition for ‘median’
    heatmap.2: no visible global function definition for ‘order.dendrogram’
    heatmap.2: no visible global function definition for ‘as.dendrogram’
    heatmap.2: no visible binding for global variable ‘sd’
    heatmap.2: no visible global function definition for ‘layout’
    heatmap.2: no visible global function definition for ‘image’
    heatmap.2: no visible global function definition for ‘axis’
    heatmap.2: no visible global function definition for ‘text’
    heatmap.2: no visible global function definition for ‘strheight’
    heatmap.2: no visible global function definition for ‘strwidth’
    heatmap.2: no visible global function definition for ‘mtext’
    heatmap.2: no visible global function definition for ‘rect’
    heatmap.2: no visible global function definition for ‘abline’
    heatmap.2: no visible global function definition for ‘lines’
    heatmap.2: no visible global function definition for ‘plot.new’
    heatmap.2: no visible global function definition for ‘title’
    heatmap.2: no visible binding for global variable ‘par’
    heatmap.2: no visible binding for global variable ‘axis’
    heatmap.2: no visible global function definition for ‘density’
    heatmap.2: no visible global function definition for ‘hist’
    hist2d: no visible global function definition for ‘heat.colors’
    hist2d: no visible global function definition for ‘image’
    lmplot2: no visible binding for global variable ‘panel.smooth’
    lmplot2: no visible global function definition for ‘residuals’
    lmplot2: no visible global function definition for ‘predict’
    lmplot2: no visible global function definition for ‘fitted’
    lmplot2: no visible global function definition for ‘deviance’
    lmplot2: no visible global function definition for ‘df.residual’
    lmplot2: no visible global function definition for ‘lm.influence’
    lmplot2: no visible global function definition for ‘weights’
    lmplot2 : text.id: no visible global function definition for ‘text’
    lmplot2 : text.id: no visible global function definition for ‘strwidth’
    lmplot2: no visible global function definition for ‘par’
    lmplot2: no visible global function definition for ‘plot’
    lmplot2: no visible global function definition for ‘title’
    lmplot2: no visible global function definition for ‘mtext’
    lmplot2: no visible global function definition for ‘strheight’
    lmplot2: no visible global function definition for ‘abline’
    lmplot2: no visible global function definition for ‘qqnorm’
    lmplot2: no visible global function definition for ‘qqline’
    lmplot2: no visible global function definition for ‘cooks.distance’
    lmplot2: no visible global function definition for ‘model.frame’
    lmplot2: no visible global function definition for ‘plot.default’
    ooplot.default: no visible global function definition for ‘heat.colors’
    ooplot.default: no visible global function definition for ‘par’
    ooplot.default : linearfitplot: no visible global function definition
     for ‘lines’
    ooplot.default: no visible global function definition for ‘plot.new’
    ooplot.default: no visible global function definition for ‘plot.window’
    ooplot.default: no visible global function definition for ‘rect’
    ooplot.default: no visible global function definition for ‘axTicks’
    ooplot.default: no visible global function definition for ‘abline’
    ooplot.default: no visible global function definition for ‘lines’
    ooplot.default: no visible global function definition for ‘points’
    ooplot.default: no visible global function definition for ‘text’
    ooplot.default : xyrect: no visible global function definition for
     ‘rect’
    ooplot.default: no visible global function definition for ‘segments’
    ooplot.default: no visible global function definition for ‘median’
    ooplot.default: no visible global function definition for ‘xinch’
    ooplot.default: no visible global function definition for ‘yinch’
    ooplot.default: no visible global function definition for ‘legend’
    ooplot.default: no visible global function definition for ‘title’
    ooplot.default: no visible global function definition for ‘axis’
    overplot: no visible global function definition for ‘par’
    overplot: no visible global function definition for ‘axis’
    overplot: no visible global function definition for ‘title’
    panel.overplot: no visible global function definition for ‘lines’
    plot.dendrogram: no visible global function definition for ‘is.leaf’
    plot.dendrogram: no visible global function definition for ‘dev.hold’
    plot.dendrogram: no visible global function definition for ‘dev.flush’
    plot.dendrogram: no visible global function definition for ‘plot’
    plot.dendrogram: no visible global function definition for ‘strwidth’
    plot.dendrogram: no visible global function definition for ‘strheight’
    plot.dendrogram: no visible global function definition for ‘segments’
    plot.dendrogram: no visible global function definition for ‘text’
    plot.lm2: no visible binding for global variable ‘panel.smooth’
    plot.lm2: no visible global function definition for ‘residuals’
    plotCI: no visible global function definition for ‘par’
    plotCI: no visible global function definition for ‘plot’
    plotCI: no visible global function definition for ‘text’
    plotCI: no visible global function definition for ‘strheight’
    plotCI: no visible global function definition for ‘arrows’
    plotCI: no visible global function definition for ‘strwidth’
    plotCI: no visible global function definition for ‘points’
    plotNode: no visible global function definition for ‘is.leaf’
    plotNode: no visible global function definition for ‘str’
    plotNode: no visible global function definition for ‘par’
    plotNode: no visible global function definition for ‘points’
    plotNode: no visible global function definition for ‘text’
    plotNode : segmentsHV: no visible global function definition for
     ‘segments’
    plotNode: no visible global function definition for ‘strwidth’
    plotNode: no visible global function definition for ‘strheight’
    plotNode: no visible global function definition for ‘rect’
    plotNode: no visible global function definition for ‘polygon’
    plotNodeLimit: no visible global function definition for ‘is.leaf’
    plotmeans: no visible global function definition for ‘par’
    plotmeans: no visible global function definition for ‘plot’
    plotmeans : myvar: no visible global function definition for ‘var’
    plotmeans: no visible global function definition for ‘qt’
    plotmeans: no visible global function definition for ‘qnorm’
    plotmeans: no visible global function definition for ‘axis’
    plotmeans: no visible global function definition for ‘text’
    plotmeans: no visible global function definition for ‘lines’
    qqnorm.aov: no visible global function definition for ‘effects’
    qqnorm.aov: no visible global function definition for ‘ppoints’
    qqnorm.aov: no visible global function definition for ‘qnorm’
    qqnorm.aov: no visible global function definition for ‘plot’
    qqnorm.aov: no visible global function definition for ‘dev.interactive’
    qqnorm.aov: no visible global function definition for ‘identify’
    residplot: no visible global function definition for
     ‘expand.model.frame’
    residplot: no visible global function definition for ‘plot’
    residplot: no visible global function definition for ‘lines’
    rich.colors: no visible global function definition for ‘dnorm’
    rich.colors: no visible global function definition for ‘par’
    rich.colors: no visible global function definition for ‘title’
    rich.colors: no visible global function definition for ‘matlines’
    rich.colors: no visible global function definition for ‘matpoints’
    rich.colors: no visible global function definition for ‘axis’
    rich.colors: no visible global function definition for ‘barplot’
    smartlegend: no visible global function definition for ‘par’
    smartlegend: no visible global function definition for ‘legend’
    textplot.character: no visible global function definition for
     ‘plot.new’
    textplot.character: no visible global function definition for ‘par’
    textplot.character: no visible global function definition for
     ‘plot.window’
    textplot.character: no visible binding for global variable ‘strwidth’
    textplot.character: no visible binding for global variable ‘strheight’
    textplot.character: no visible global function definition for
     ‘strwidth’
    textplot.character: no visible global function definition for
     ‘strheight’
    textplot.character: no visible global function definition for ‘text’
    textplot.matrix: no visible global function definition for ‘par’
    textplot.matrix: no visible global function definition for ‘plot.new’
    textplot.matrix: no visible global function definition for
     ‘plot.window’
    textplot.matrix : <anonymous>: no visible global function definition
     for ‘strwidth’
    textplot.matrix: no visible global function definition for ‘strwidth’
    textplot.matrix: no visible global function definition for ‘strheight’
    textplot.matrix: no visible global function definition for ‘text’
    Undefined global functions or variables:
     abline arrows as.dendrogram axTicks axis barplot col2rgb contour
     contourLines cooks.distance density dev.flush dev.hold
     dev.interactive deviance df.residual dist dnorm effects
     expand.model.frame filled.contour fitted hclust heat.colors hist
     identify image is.leaf layout legend lines lm.influence matlines
     matpoints median model.frame mtext order.dendrogram panel.smooth par
     plot plot.default plot.new plot.window points polygon ppoints predict
     qnorm qqline qqnorm qt rect residuals rgb sd segments str strheight
     strwidth text title topo.colors var weights xinch yinch
    Consider adding
     importFrom("grDevices", "col2rgb", "contourLines", "dev.flush",
     "dev.hold", "dev.interactive", "heat.colors", "rgb",
     "topo.colors")
     importFrom("graphics", "abline", "arrows", "axTicks", "axis",
     "barplot", "contour", "filled.contour", "hist", "identify",
     "image", "layout", "legend", "lines", "matlines",
     "matpoints", "mtext", "panel.smooth", "par", "plot",
     "plot.default", "plot.new", "plot.window", "points",
     "polygon", "rect", "segments", "strheight", "strwidth",
     "text", "title", "xinch", "yinch")
     importFrom("stats", "as.dendrogram", "cooks.distance", "density",
     "deviance", "df.residual", "dist", "dnorm", "effects",
     "expand.model.frame", "fitted", "hclust", "is.leaf",
     "lm.influence", "median", "model.frame", "order.dendrogram",
     "ppoints", "predict", "qnorm", "qqline", "qqnorm", "qt",
     "residuals", "sd", "var", "weights")
     importFrom("utils", "str")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64