CRAN Package Check Results for Package hexbin

Last updated on 2014-07-24 15:52:20.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.26.3 2.02 38.69 40.71 NOTE
r-devel-linux-x86_64-debian-gcc 1.26.3 2.00 38.06 40.06 NOTE
r-devel-linux-x86_64-fedora-clang 1.26.3 96.09 NOTE
r-devel-linux-x86_64-fedora-gcc 1.26.3 91.14 NOTE
r-devel-osx-x86_64-clang 1.26.3 75.48 NOTE
r-devel-windows-ix86+x86_64 1.26.3 8.00 73.00 81.00 NOTE
r-patched-linux-x86_64 1.26.3 2.04 38.62 40.66 NOTE
r-patched-solaris-sparc 1.26.3 471.60 NOTE
r-patched-solaris-x86 1.26.3 113.90 NOTE
r-release-linux-ix86 1.26.3 2.64 52.34 54.97 NOTE
r-release-linux-x86_64 1.26.3 1.93 39.20 41.13 NOTE
r-release-osx-x86_64-mavericks 1.26.3 WARN
r-release-osx-x86_64-snowleopard 1.26.3 WARN
r-release-windows-ix86+x86_64 1.26.3 10.00 73.00 83.00 NOTE
r-oldrel-windows-ix86+x86_64 1.26.3 9.00 74.00 83.00 NOTE

Check Details

Version: 1.26.3
Check: dependencies in R code
Result: NOTE
    Unexported objects imported by ':::' calls:
     ‘lattice:::cond.orders’ ‘lattice:::construct.scales’
     ‘lattice:::cupdate’ ‘lattice:::limits.and.aspect’
     ‘lattice:::trellis.skeleton’
     See the note in ?`:::` about the use of this operator.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.26.3
Check: R code for possible problems
Result: NOTE
    mixcolors: no visible global function definition for ‘coords’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.26.3
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     ‘marray’ ‘affy’ ‘Biobase’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 1.26.3
Check: R code for possible problems
Result: NOTE
    mixcolors: no visible global function definition for ‘coords’
    plotMAhex: no visible global function definition for ‘maA’
    plotMAhex: no visible global function definition for ‘maM’
    plotMAhex: no visible global function definition for ‘maW’
    plotMAhex: no visible global function definition for ‘MA.RG’
    plotMAhex: no visible global function definition for ‘exprs’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 1.26.3
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘limma’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 1.26.3
Check: running R code from vignettes
Result: WARNING
    Errors in running code in vignettes:
    when running code in ‘hexagon_binning.Rnw’
     ...
    > hdiffplot(erode(hbF, cdfcut = 0.25), erode(hbM, cdfcut = 0.25),
    + unzoom = 1.3)
    Warning in if (nchar(main) > 0) grid.text(main, y = unit(1, "npc") + unit(1.5, :
     the condition has length > 1 and only the first element will be used
    
    > library("marray")
    
     When sourcing ‘hexagon_binning.R’:
    Error: there is no package called ‘marray’
    Execution halted
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 1.26.3
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: grid
    Loading required package: lattice
    Warning in if (nchar(main) > 0) grid.text(main, y = unit(1, "npc") + unit(1.5, :
     the condition has length > 1 and only the first element will be used
    
    Error: processing vignette 'hexagon_binning.Rnw' failed with diagnostics:
     chunk 9 (label = marray1)
    Error in library("marray") : there is no package called ‘marray’
    Execution halted
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard