CRAN Package Check Results for Package joineR

Last updated on 2015-07-04 08:50:24.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0-3 1.59 56.42 58.02 NOTE
r-devel-linux-x86_64-debian-gcc 1.0-3 1.67 55.76 57.43 NOTE
r-devel-linux-x86_64-fedora-clang 1.0-3 110.34 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0-3 105.50 NOTE
r-devel-osx-x86_64-clang 1.0-3 110.33 NOTE
r-devel-windows-ix86+x86_64 1.0-3 9.00 89.00 98.00 NOTE
r-patched-linux-x86_64 1.0-3 1.58 53.86 55.44 NOTE
r-patched-solaris-sparc 1.0-3 676.10 NOTE
r-patched-solaris-x86 1.0-3 158.90 NOTE
r-release-linux-x86_64 1.0-3 1.62 56.66 58.28 NOTE
r-release-osx-x86_64-mavericks 1.0-3 NOTE
r-release-windows-ix86+x86_64 1.0-3 7.00 92.00 99.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0-3 9.00 108.00 117.00 NOTE

Check Details

Version: 1.0-3
Check: package dependencies
Result: NOTE
    Depends: includes the non-default packages:
     ‘nlme’ ‘MASS’ ‘boot’ ‘survival’ ‘lattice’ ‘statmod’ ‘gdata’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-3
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     lines.jointdata plot.jointdata plot.vargm points.jointdata
     subset.jointdata summary.joint summary.jointdata
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    joint: no visible global function definition for ‘model.frame’
    joint: no visible global function definition for ‘model.matrix’
    joint: no visible global function definition for ‘terms’
    joint: no visible global function definition for ‘model.extract’
    joint : longst: no visible global function definition for ‘as.formula’
    joint : longst: no visible binding for global variable ‘na.omit’
    joint : survst: no visible global function definition for ‘coef’
    jointSE: no visible global function definition for ‘model.frame’
    jointSE: no visible global function definition for ‘var’
    jointplot: no visible global function definition for ‘lowess’
    lines.jointdata: no visible global function definition for ‘lines’
    plot.jointdata: no visible global function definition for ‘par’
    plot.jointdata: no visible global function definition for ‘plot’
    plot.jointdata: no visible global function definition for ‘points’
    plot.jointdata : <anonymous>: no visible global function definition for
     ‘lines’
    plot.vargm: no visible global function definition for ‘plot’
    plot.vargm: no visible global function definition for ‘lines’
    plot.vargm: no visible global function definition for ‘smooth.spline’
    plot.vargm: no visible global function definition for ‘abline’
    points.jointdata: no visible global function definition for ‘points’
    summarybal : <anonymous>: no visible global function definition for
     ‘var’
    summarybal: no visible global function definition for ‘cor’
    Undefined global functions or variables:
     abline as.formula coef cor lines lowess model.extract model.frame
     model.matrix na.omit par plot points smooth.spline terms var
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64