CRAN Package Check Results for Package labdsv

Last updated on 2015-05-30 03:48:42.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7-0 4.02 47.76 51.78 NOTE
r-devel-linux-x86_64-debian-gcc 1.7-0 4.10 45.00 49.10 NOTE
r-devel-linux-x86_64-fedora-clang 1.7-0 105.10 NOTE
r-devel-linux-x86_64-fedora-gcc 1.7-0 95.94 NOTE
r-devel-osx-x86_64-clang 1.7-0 85.61 NOTE
r-devel-windows-ix86+x86_64 1.7-0 16.00 90.00 106.00 OK
r-patched-linux-x86_64 1.7-0 3.96 44.78 48.74 NOTE
r-patched-solaris-sparc 1.7-0 559.40 ERROR
r-patched-solaris-x86 1.7-0 301.20 NOTE
r-release-linux-x86_64 1.7-0 4.48 45.33 49.81 NOTE
r-release-osx-x86_64-mavericks 1.7-0 NOTE
r-release-osx-x86_64-snowleopard 1.7-0 NOTE
r-release-windows-ix86+x86_64 1.7-0 17.00 90.00 107.00 OK
r-oldrel-windows-ix86+x86_64 1.7-0 19.00 109.00 128.00 OK

Check Details

Version: 1.7-0
Check: compiled code
Result: NOTE
    File ‘labdsv/libs/labdsv.so’:
     Found ‘_gfortran_rand’, possibly from ‘rand’ (Fortran)
     Object: ‘indval.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.7-0
Check: compiled code
Result: NOTE
    File ‘labdsv/libs/labdsv.so’:
     Found ‘__gfortran_rand’, possibly from ‘rand’ (Fortran)
     Object: ‘indval.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-osx-x86_64-clang, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 1.7-0
Check: compiled code
Result: NOTE
    File ‘labdsv/libs/labdsv.so’:
     Found ‘rand_’, possibly from ‘rand’ (Fortran)
     Object: ‘indval.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86

Version: 1.7-0
Check: examples
Result: ERROR
    Running examples in ‘labdsv-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: indval
    > ### Title: Dufrene-Legendre Indicator Species Analysis
    > ### Aliases: indval duleg indval.default indval.stride summary.indval
    > ### Keywords: cluster
    >
    > ### ** Examples
    >
    > data(bryceveg) # returns a vegetation data.frame
    > dis.bc <- dsvdis(bryceveg,'bray/curtis') # returns a dissimilarity matrix
    > clust <- sample(1:5,nrow(bryceveg),replace=TRUE)
    > indval(bryceveg,clust)
    
     *** caught segfault ***
    address 0, cause 'memory not mapped'
    
    Traceback:
     1: .Fortran("duleg", as.double(as.matrix(x)), as.integer(numplt), as.integer(numspc), as.integer(factor(clustering)), as.integer(table(clustering)), as.integer(numcls), as.integer(numitr), relfrq = relfrq, relabu = relabu, indval = indval, pval = pval, indcls = indcls, maxcls = as.integer(maxcls), as.double(tmpfrq), as.double(tmpabu), as.integer(pclass), as.integer(tclass), errcod = as.integer(errcod), PACKAGE = "labdsv")
     2: indval.default(bryceveg, clust)
     3: indval(bryceveg, clust)
    aborting ...
Flavor: r-patched-solaris-sparc