CRAN Package Check Results for Package lcmm

Last updated on 2015-07-02 11:48:22.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7.2 39.16 57.21 96.37 NOTE
r-devel-linux-x86_64-debian-gcc 1.7.2 38.27 55.70 93.97 NOTE
r-devel-linux-x86_64-fedora-clang 1.7.2 161.76 NOTE
r-devel-linux-x86_64-fedora-gcc 1.7.2 152.94 NOTE
r-devel-osx-x86_64-clang 1.7.2 138.96 OK
r-devel-windows-ix86+x86_64 1.7.2 105.00 125.00 230.00 OK
r-patched-linux-x86_64 1.7.2 38.54 57.36 95.90 OK
r-patched-solaris-sparc 1.7.2 1237.20 OK
r-patched-solaris-x86 1.7.2 366.10 OK
r-release-linux-x86_64 1.7.2 42.59 56.87 99.46 OK
r-release-osx-x86_64-mavericks 1.7.2 WARN
r-release-windows-ix86+x86_64 1.7.2 89.00 91.00 180.00 OK
r-oldrel-windows-ix86+x86_64 1.7.2 87.00 108.00 195.00 OK

Check Details

Version: 1.7.2
Check: R code for possible problems
Result: NOTE
    .Contlcmm: no visible global function definition for ‘formula’
    .Contlcmm: no visible binding for global variable ‘na.pass’
    .Contlcmm: no visible global function definition for ‘get_all_vars’
    .Contlcmm: no visible global function definition for ‘terms’
    .Contlcmm: no visible global function definition for ‘model.matrix’
    .Ordlcmm: no visible global function definition for ‘formula’
    .Ordlcmm: no visible binding for global variable ‘na.pass’
    .Ordlcmm: no visible global function definition for ‘get_all_vars’
    .Ordlcmm: no visible global function definition for ‘terms’
    .Ordlcmm: no visible global function definition for ‘model.matrix’
    .Ordlcmm: no visible global function definition for ‘qnorm’
    .Ordlcmm: no visible global function definition for ‘median’
    .plotfit: no visible global function definition for ‘formula’
    .plotfit: no visible binding for global variable ‘na.pass’
    .plotfit: no visible global function definition for ‘quantile’
    .plotfit : <anonymous>: no visible global function definition for ‘sd’
    .plotfit: no visible global function definition for ‘na.omit’
    .plotfit: no visible binding for global variable ‘matplot’
    .plotfit: no visible binding for global variable ‘segments’
    .plotfit: no visible binding for global variable ‘matlines’
    .plotlinkfunctionmult: no visible global function definition for
     ‘rainbow’
    .plotlinkfunctionmult: no visible global function definition for ‘par’
    .plotresid: no visible global function definition for ‘par’
    .plotresid: no visible global function definition for ‘qnorm’
    Diffepoce: no visible global function definition for ‘qnorm’
    Jointlcmm: no visible global function definition for ‘formula’
    Jointlcmm: no visible binding for global variable ‘na.pass’
    Jointlcmm: no visible global function definition for ‘terms’
    Jointlcmm: no visible global function definition for ‘model.matrix’
    Jointlcmm: no visible global function definition for ‘hist’
    Jointlcmm: no visible global function definition for ‘quantile’
    VarCovRE.Jointlcmm: no visible global function definition for ‘pnorm’
    VarCovRE.hlme: no visible global function definition for ‘pnorm’
    VarCovRE.lcmm: no visible global function definition for ‘pnorm’
    VarCovRE.multlcmm: no visible global function definition for ‘pnorm’
    VarExpl.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    VarExpl.Jointlcmm: no visible global function definition for ‘formula’
    VarExpl.hlme: no visible global function definition for ‘model.matrix’
    VarExpl.hlme: no visible global function definition for ‘formula’
    VarExpl.lcmm: no visible global function definition for ‘model.matrix’
    VarExpl.lcmm: no visible global function definition for ‘formula’
    VarExpl.multlcmm: no visible global function definition for
     ‘model.matrix’
    VarExpl.multlcmm: no visible global function definition for ‘formula’
    WaldMult: no visible global function definition for ‘na.omit’
    WaldMult: no visible global function definition for ‘pchisq’
    WaldMult: no visible global function definition for ‘pnorm’
    cuminc : integrate2: no visible global function definition for
     ‘integrate’
    cuminc : calculincid: no visible global function definition for ‘rnorm’
    cuminc: no visible binding for global variable ‘median’
    cuminc: no visible binding for global variable ‘quantile’
    dynpred: no visible global function definition for ‘na.omit’
    dynpred: no visible binding for global variable ‘na.omit’
    dynpred: no visible binding for global variable ‘na.fail’
    dynpred: no visible global function definition for ‘formula’
    dynpred: no visible global function definition for ‘model.frame’
    dynpred: no visible global function definition for ‘model.matrix’
    dynpred : integrate2: no visible global function definition for
     ‘integrate’
    dynpred : doOneDraw: no visible global function definition for ‘rnorm’
    dynpred: no visible binding for global variable ‘median’
    dynpred: no visible binding for global variable ‘quantile’
    epoce: no visible global function definition for ‘formula’
    epoce: no visible binding for global variable ‘na.pass’
    epoce: no visible global function definition for ‘model.matrix’
    fitY.Jointlcmm: no visible global function definition for ‘formula’
    fitY.Jointlcmm: no visible binding for global variable ‘na.pass’
    fitY.lcmm: no visible global function definition for ‘formula’
    fitY.lcmm: no visible binding for global variable ‘na.pass’
    fitY.multlcmm: no visible global function definition for ‘formula’
    fitY.multlcmm: no visible binding for global variable ‘na.pass’
    hlme: no visible binding for global variable ‘na.omit’
    hlme: no visible binding for global variable ‘na.fail’
    hlme: no visible global function definition for ‘terms’
    hlme: no visible global function definition for ‘as.formula’
    hlme: no visible global function definition for ‘get_all_vars’
    hlme: no visible global function definition for ‘formula’
    hlme: no visible binding for global variable ‘na.pass’
    hlme: no visible global function definition for ‘model.matrix’
    lcmm: no visible binding for global variable ‘na.omit’
    lcmm: no visible binding for global variable ‘na.fail’
    lcmm: no visible global function definition for ‘terms’
    lcmm: no visible global function definition for ‘as.formula’
    lcmm: no visible global function definition for ‘formula’
    lcmm: no visible binding for global variable ‘na.pass’
    lcmm: no visible global function definition for ‘quantile’
    lcmm: no visible global function definition for ‘hist’
    multlcmm: no visible global function definition for ‘terms’
    multlcmm: no visible global function definition for ‘formula’
    multlcmm: no visible global function definition for ‘as.formula’
    multlcmm: no visible global function definition for ‘get_all_vars’
    multlcmm: no visible binding for global variable ‘na.pass’
    multlcmm: no visible global function definition for ‘model.matrix’
    multlcmm: no visible global function definition for ‘quantile’
    multlcmm: no visible global function definition for ‘hist’
    plot.dynpred: no visible global function definition for ‘rainbow’
    plot.dynpred: no visible global function definition for ‘par’
    plot.dynpred: no visible binding for global variable ‘plot’
    plot.dynpred: no visible binding for global variable ‘points’
    plot.dynpred: no visible binding for global variable ‘segments’
    plot.dynpred: no visible global function definition for ‘axis’
    plot.dynpred: no visible global function definition for ‘mtext’
    plot.dynpred: no visible binding for global variable ‘lines’
    plot.dynpred: no visible binding for global variable ‘matlines’
    plot.predictlink: no visible global function definition for ‘rainbow’
    predictL.Jointlcmm: no visible binding for global variable ‘na.omit’
    predictL.Jointlcmm: no visible binding for global variable ‘na.fail’
    predictL.Jointlcmm: no visible global function definition for ‘formula’
    predictL.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    predictL.Jointlcmm: no visible global function definition for ‘na.omit’
    predictL.lcmm: no visible binding for global variable ‘na.omit’
    predictL.lcmm: no visible binding for global variable ‘na.fail’
    predictL.lcmm: no visible global function definition for ‘formula’
    predictL.lcmm: no visible global function definition for ‘model.matrix’
    predictL.lcmm: no visible global function definition for ‘na.omit’
    predictL.multlcmm: no visible global function definition for
     ‘model.matrix’
    predictL.multlcmm: no visible global function definition for
     ‘as.formula’
    predictL.multlcmm: no visible global function definition for ‘na.omit’
    predictY.Jointlcmm: no visible binding for global variable ‘na.omit’
    predictY.Jointlcmm: no visible binding for global variable ‘na.fail’
    predictY.Jointlcmm: no visible global function definition for ‘formula’
    predictY.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    predictY.Jointlcmm: no visible global function definition for ‘na.omit’
    predictY.Jointlcmm : doOneDraw: no visible global function definition
     for ‘rnorm’
    predictY.Jointlcmm : f: no visible global function definition for
     ‘quantile’
    predictY.hlme: no visible binding for global variable ‘na.omit’
    predictY.hlme: no visible binding for global variable ‘na.fail’
    predictY.hlme: no visible global function definition for ‘formula’
    predictY.hlme: no visible global function definition for ‘model.matrix’
    predictY.hlme: no visible global function definition for ‘na.omit’
    predictY.lcmm: no visible binding for global variable ‘na.omit’
    predictY.lcmm: no visible binding for global variable ‘na.fail’
    predictY.lcmm: no visible global function definition for ‘formula’
    predictY.lcmm: no visible global function definition for ‘model.matrix’
    predictY.lcmm: no visible global function definition for ‘rnorm’
    predictY.lcmm : f: no visible global function definition for ‘quantile’
    predictY.lcmm: no visible global function definition for ‘pnorm’
    predictY.multlcmm: no visible global function definition for
     ‘model.matrix’
    predictY.multlcmm: no visible global function definition for
     ‘as.formula’
    predictY.multlcmm: no visible global function definition for ‘rnorm’
    predictY.multlcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.Jointlcmm: no visible global function definition for
     ‘na.omit’
    predictlink.Jointlcmm: no visible global function definition for
     ‘rnorm’
    predictlink.Jointlcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.lcmm: no visible global function definition for ‘na.omit’
    predictlink.lcmm: no visible global function definition for ‘rnorm’
    predictlink.lcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.multlcmm: no visible global function definition for
     ‘na.fail’
    predictlink.multlcmm: no visible global function definition for ‘rnorm’
    predictlink.multlcmm : f: no visible global function definition for
     ‘quantile’
    summary.Jointlcmm: no visible global function definition for ‘pchisq’
    summary.hlme: no visible global function definition for ‘pchisq’
    summary.lcmm: no visible global function definition for ‘pchisq’
    summary.multlcmm: no visible global function definition for ‘pchisq’
    summary.multlcmm: no visible global function definition for ‘na.omit’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc

Version: 1.7.2
Check: R code for possible problems
Result: NOTE
    .Contlcmm: no visible global function definition for ‘formula’
    .Contlcmm: no visible binding for global variable ‘na.pass’
    .Contlcmm: no visible global function definition for ‘get_all_vars’
    .Contlcmm: no visible global function definition for ‘terms’
    .Contlcmm: no visible global function definition for ‘model.matrix’
    .Ordlcmm: no visible global function definition for ‘formula’
    .Ordlcmm: no visible binding for global variable ‘na.pass’
    .Ordlcmm: no visible global function definition for ‘get_all_vars’
    .Ordlcmm: no visible global function definition for ‘terms’
    .Ordlcmm: no visible global function definition for ‘model.matrix’
    .Ordlcmm: no visible global function definition for ‘qnorm’
    .Ordlcmm: no visible global function definition for ‘median’
    .plotfit: no visible global function definition for ‘formula’
    .plotfit: no visible binding for global variable ‘na.pass’
    .plotfit: no visible global function definition for ‘quantile’
    .plotfit : <anonymous>: no visible global function definition for ‘sd’
    .plotfit: no visible global function definition for ‘na.omit’
    .plotfit: no visible binding for global variable ‘matplot’
    .plotfit: no visible binding for global variable ‘segments’
    .plotfit: no visible binding for global variable ‘matlines’
    .plotlinkfunctionmult: no visible global function definition for
     ‘rainbow’
    .plotlinkfunctionmult: no visible global function definition for ‘par’
    .plotresid: no visible global function definition for ‘par’
    .plotresid: no visible global function definition for ‘qnorm’
    Diffepoce: no visible global function definition for ‘qnorm’
    Jointlcmm: no visible global function definition for ‘formula’
    Jointlcmm: no visible binding for global variable ‘na.pass’
    Jointlcmm: no visible global function definition for ‘terms’
    Jointlcmm: no visible global function definition for ‘model.matrix’
    Jointlcmm: no visible global function definition for ‘hist’
    Jointlcmm: no visible global function definition for ‘quantile’
    VarCovRE.Jointlcmm: no visible global function definition for ‘pnorm’
    VarCovRE.hlme: no visible global function definition for ‘pnorm’
    VarCovRE.lcmm: no visible global function definition for ‘pnorm’
    VarCovRE.multlcmm: no visible global function definition for ‘pnorm’
    VarExpl.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    VarExpl.Jointlcmm: no visible global function definition for ‘formula’
    VarExpl.hlme: no visible global function definition for ‘model.matrix’
    VarExpl.hlme: no visible global function definition for ‘formula’
    VarExpl.lcmm: no visible global function definition for ‘model.matrix’
    VarExpl.lcmm: no visible global function definition for ‘formula’
    VarExpl.multlcmm: no visible global function definition for
     ‘model.matrix’
    VarExpl.multlcmm: no visible global function definition for ‘formula’
    WaldMult: no visible global function definition for ‘na.omit’
    WaldMult: no visible global function definition for ‘pchisq’
    WaldMult: no visible global function definition for ‘pnorm’
    cuminc : integrate2: no visible global function definition for
     ‘integrate’
    cuminc : calculincid: no visible global function definition for ‘rnorm’
    cuminc: no visible binding for global variable ‘median’
    cuminc: no visible binding for global variable ‘quantile’
    dynpred: no visible global function definition for ‘na.omit’
    dynpred: no visible binding for global variable ‘na.omit’
    dynpred: no visible binding for global variable ‘na.fail’
    dynpred: no visible global function definition for ‘formula’
    dynpred: no visible global function definition for ‘model.frame’
    dynpred: no visible global function definition for ‘model.matrix’
    dynpred : integrate2: no visible global function definition for
     ‘integrate’
    dynpred : doOneDraw: no visible global function definition for ‘rnorm’
    dynpred: no visible binding for global variable ‘median’
    dynpred: no visible binding for global variable ‘quantile’
    epoce: no visible global function definition for ‘formula’
    epoce: no visible binding for global variable ‘na.pass’
    epoce: no visible global function definition for ‘model.matrix’
    fitY.Jointlcmm: no visible global function definition for ‘formula’
    fitY.Jointlcmm: no visible binding for global variable ‘na.pass’
    fitY.lcmm: no visible global function definition for ‘formula’
    fitY.lcmm: no visible binding for global variable ‘na.pass’
    fitY.multlcmm: no visible global function definition for ‘formula’
    fitY.multlcmm: no visible binding for global variable ‘na.pass’
    hlme: no visible binding for global variable ‘na.omit’
    hlme: no visible binding for global variable ‘na.fail’
    hlme: no visible global function definition for ‘terms’
    hlme: no visible global function definition for ‘as.formula’
    hlme: no visible global function definition for ‘get_all_vars’
    hlme: no visible global function definition for ‘formula’
    hlme: no visible binding for global variable ‘na.pass’
    hlme: no visible global function definition for ‘model.matrix’
    lcmm: no visible binding for global variable ‘na.omit’
    lcmm: no visible binding for global variable ‘na.fail’
    lcmm: no visible global function definition for ‘terms’
    lcmm: no visible global function definition for ‘as.formula’
    lcmm: no visible global function definition for ‘formula’
    lcmm: no visible binding for global variable ‘na.pass’
    lcmm: no visible global function definition for ‘quantile’
    lcmm: no visible global function definition for ‘hist’
    multlcmm: no visible global function definition for ‘terms’
    multlcmm: no visible global function definition for ‘formula’
    multlcmm: no visible global function definition for ‘as.formula’
    multlcmm: no visible global function definition for ‘get_all_vars’
    multlcmm: no visible binding for global variable ‘na.pass’
    multlcmm: no visible global function definition for ‘model.matrix’
    multlcmm: no visible global function definition for ‘quantile’
    multlcmm: no visible global function definition for ‘hist’
    plot.dynpred: no visible global function definition for ‘rainbow’
    plot.dynpred: no visible global function definition for ‘par’
    plot.dynpred: no visible binding for global variable ‘plot’
    plot.dynpred: no visible binding for global variable ‘points’
    plot.dynpred: no visible binding for global variable ‘segments’
    plot.dynpred: no visible global function definition for ‘axis’
    plot.dynpred: no visible global function definition for ‘mtext’
    plot.dynpred: no visible binding for global variable ‘lines’
    plot.dynpred: no visible binding for global variable ‘matlines’
    plot.predictlink: no visible global function definition for ‘rainbow’
    predictL.Jointlcmm: no visible binding for global variable ‘na.omit’
    predictL.Jointlcmm: no visible binding for global variable ‘na.fail’
    predictL.Jointlcmm: no visible global function definition for ‘formula’
    predictL.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    predictL.Jointlcmm: no visible global function definition for ‘na.omit’
    predictL.lcmm: no visible binding for global variable ‘na.omit’
    predictL.lcmm: no visible binding for global variable ‘na.fail’
    predictL.lcmm: no visible global function definition for ‘formula’
    predictL.lcmm: no visible global function definition for ‘model.matrix’
    predictL.lcmm: no visible global function definition for ‘na.omit’
    predictL.multlcmm: no visible global function definition for
     ‘model.matrix’
    predictL.multlcmm: no visible global function definition for
     ‘as.formula’
    predictL.multlcmm: no visible global function definition for ‘na.omit’
    predictY.Jointlcmm: no visible binding for global variable ‘na.omit’
    predictY.Jointlcmm: no visible binding for global variable ‘na.fail’
    predictY.Jointlcmm: no visible global function definition for ‘formula’
    predictY.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    predictY.Jointlcmm: no visible global function definition for ‘na.omit’
    predictY.Jointlcmm : doOneDraw: no visible global function definition
     for ‘rnorm’
    predictY.Jointlcmm : f: no visible global function definition for
     ‘quantile’
    predictY.hlme: no visible binding for global variable ‘na.omit’
    predictY.hlme: no visible binding for global variable ‘na.fail’
    predictY.hlme: no visible global function definition for ‘formula’
    predictY.hlme: no visible global function definition for ‘model.matrix’
    predictY.hlme: no visible global function definition for ‘na.omit’
    predictY.lcmm: no visible binding for global variable ‘na.omit’
    predictY.lcmm: no visible binding for global variable ‘na.fail’
    predictY.lcmm: no visible global function definition for ‘formula’
    predictY.lcmm: no visible global function definition for ‘model.matrix’
    predictY.lcmm: no visible global function definition for ‘rnorm’
    predictY.lcmm : f: no visible global function definition for ‘quantile’
    predictY.lcmm: no visible global function definition for ‘pnorm’
    predictY.multlcmm: no visible global function definition for
     ‘model.matrix’
    predictY.multlcmm: no visible global function definition for
     ‘as.formula’
    predictY.multlcmm: no visible global function definition for ‘rnorm’
    predictY.multlcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.Jointlcmm: no visible global function definition for
     ‘na.omit’
    predictlink.Jointlcmm: no visible global function definition for
     ‘rnorm’
    predictlink.Jointlcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.lcmm: no visible global function definition for ‘na.omit’
    predictlink.lcmm: no visible global function definition for ‘rnorm’
    predictlink.lcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.multlcmm: no visible global function definition for
     ‘na.fail’
    predictlink.multlcmm: no visible global function definition for ‘rnorm’
    predictlink.multlcmm : f: no visible global function definition for
     ‘quantile’
    summary.Jointlcmm: no visible global function definition for ‘pchisq’
    summary.hlme: no visible global function definition for ‘pchisq’
    summary.lcmm: no visible global function definition for ‘pchisq’
    summary.multlcmm: no visible global function definition for ‘pchisq’
    summary.multlcmm: no visible global function definition for ‘na.omit’
    Undefined global functions or variables:
     as.formula axis formula get_all_vars hist integrate lines matlines
     matplot median model.frame model.matrix mtext na.fail na.omit na.pass
     par pchisq plot pnorm points qnorm quantile rainbow rnorm sd segments
     terms
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.7.2
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
Flavor: r-release-osx-x86_64-mavericks