CRAN Package Check Results for Package lcmm

Last updated on 2015-08-02 06:48:00.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7.2 42.09 59.55 101.64 NOTE
r-devel-linux-x86_64-debian-gcc 1.7.2 43.05 59.04 102.09 NOTE
r-devel-linux-x86_64-fedora-clang 1.7.2 163.92 NOTE
r-devel-linux-x86_64-fedora-gcc 1.7.2 156.04 NOTE
r-devel-osx-x86_64-clang 1.7.2 127.59 OK
r-devel-windows-ix86+x86_64 1.7.2 87.00 98.00 185.00 NOTE
r-patched-linux-x86_64 1.7.2 44.32 57.30 101.62 OK
r-patched-solaris-sparc 1.7.2 1255.30 OK
r-patched-solaris-x86 1.7.2 359.20 OK
r-release-linux-x86_64 1.7.2 42.72 57.12 99.85 OK
r-release-osx-x86_64-mavericks 1.7.2 WARN
r-release-windows-ix86+x86_64 1.7.2 108.00 90.00 198.00 OK
r-oldrel-windows-ix86+x86_64 1.7.2 105.00 99.00 204.00 OK

Check Details

Version: 1.7.2
Check: R code for possible problems
Result: NOTE
    .Contlcmm: no visible global function definition for ‘formula’
    .Contlcmm: no visible binding for global variable ‘na.pass’
    .Contlcmm: no visible global function definition for ‘get_all_vars’
    .Contlcmm: no visible global function definition for ‘terms’
    .Contlcmm: no visible global function definition for ‘model.matrix’
    .Ordlcmm: no visible global function definition for ‘formula’
    .Ordlcmm: no visible binding for global variable ‘na.pass’
    .Ordlcmm: no visible global function definition for ‘get_all_vars’
    .Ordlcmm: no visible global function definition for ‘terms’
    .Ordlcmm: no visible global function definition for ‘model.matrix’
    .Ordlcmm: no visible global function definition for ‘qnorm’
    .Ordlcmm: no visible global function definition for ‘median’
    .plotfit: no visible global function definition for ‘formula’
    .plotfit: no visible binding for global variable ‘na.pass’
    .plotfit: no visible global function definition for ‘quantile’
    .plotfit : <anonymous>: no visible global function definition for ‘sd’
    .plotfit: no visible global function definition for ‘na.omit’
    .plotfit: no visible binding for global variable ‘matplot’
    .plotfit: no visible binding for global variable ‘segments’
    .plotfit: no visible binding for global variable ‘matlines’
    .plotlinkfunctionmult: no visible global function definition for
     ‘rainbow’
    .plotlinkfunctionmult: no visible global function definition for ‘par’
    .plotresid: no visible global function definition for ‘par’
    .plotresid: no visible global function definition for ‘qnorm’
    Diffepoce: no visible global function definition for ‘qnorm’
    Jointlcmm: no visible global function definition for ‘formula’
    Jointlcmm: no visible binding for global variable ‘na.pass’
    Jointlcmm: no visible global function definition for ‘terms’
    Jointlcmm: no visible global function definition for ‘model.matrix’
    Jointlcmm: no visible global function definition for ‘hist’
    Jointlcmm: no visible global function definition for ‘quantile’
    VarCovRE.Jointlcmm: no visible global function definition for ‘pnorm’
    VarCovRE.hlme: no visible global function definition for ‘pnorm’
    VarCovRE.lcmm: no visible global function definition for ‘pnorm’
    VarCovRE.multlcmm: no visible global function definition for ‘pnorm’
    VarExpl.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    VarExpl.Jointlcmm: no visible global function definition for ‘formula’
    VarExpl.hlme: no visible global function definition for ‘model.matrix’
    VarExpl.hlme: no visible global function definition for ‘formula’
    VarExpl.lcmm: no visible global function definition for ‘model.matrix’
    VarExpl.lcmm: no visible global function definition for ‘formula’
    VarExpl.multlcmm: no visible global function definition for
     ‘model.matrix’
    VarExpl.multlcmm: no visible global function definition for ‘formula’
    WaldMult: no visible global function definition for ‘na.omit’
    WaldMult: no visible global function definition for ‘pchisq’
    WaldMult: no visible global function definition for ‘pnorm’
    cuminc : integrate2: no visible global function definition for
     ‘integrate’
    cuminc : calculincid: no visible global function definition for ‘rnorm’
    cuminc: no visible binding for global variable ‘median’
    cuminc: no visible binding for global variable ‘quantile’
    dynpred: no visible global function definition for ‘na.omit’
    dynpred: no visible binding for global variable ‘na.omit’
    dynpred: no visible binding for global variable ‘na.fail’
    dynpred: no visible global function definition for ‘formula’
    dynpred: no visible global function definition for ‘model.frame’
    dynpred: no visible global function definition for ‘model.matrix’
    dynpred : integrate2: no visible global function definition for
     ‘integrate’
    dynpred : doOneDraw: no visible global function definition for ‘rnorm’
    dynpred: no visible binding for global variable ‘median’
    dynpred: no visible binding for global variable ‘quantile’
    epoce: no visible global function definition for ‘formula’
    epoce: no visible binding for global variable ‘na.pass’
    epoce: no visible global function definition for ‘model.matrix’
    fitY.Jointlcmm: no visible global function definition for ‘formula’
    fitY.Jointlcmm: no visible binding for global variable ‘na.pass’
    fitY.lcmm: no visible global function definition for ‘formula’
    fitY.lcmm: no visible binding for global variable ‘na.pass’
    fitY.multlcmm: no visible global function definition for ‘formula’
    fitY.multlcmm: no visible binding for global variable ‘na.pass’
    hlme: no visible binding for global variable ‘na.omit’
    hlme: no visible binding for global variable ‘na.fail’
    hlme: no visible global function definition for ‘terms’
    hlme: no visible global function definition for ‘as.formula’
    hlme: no visible global function definition for ‘get_all_vars’
    hlme: no visible global function definition for ‘formula’
    hlme: no visible binding for global variable ‘na.pass’
    hlme: no visible global function definition for ‘model.matrix’
    lcmm: no visible binding for global variable ‘na.omit’
    lcmm: no visible binding for global variable ‘na.fail’
    lcmm: no visible global function definition for ‘terms’
    lcmm: no visible global function definition for ‘as.formula’
    lcmm: no visible global function definition for ‘formula’
    lcmm: no visible binding for global variable ‘na.pass’
    lcmm: no visible global function definition for ‘quantile’
    lcmm: no visible global function definition for ‘hist’
    multlcmm: no visible global function definition for ‘terms’
    multlcmm: no visible global function definition for ‘formula’
    multlcmm: no visible global function definition for ‘as.formula’
    multlcmm: no visible global function definition for ‘get_all_vars’
    multlcmm: no visible binding for global variable ‘na.pass’
    multlcmm: no visible global function definition for ‘model.matrix’
    multlcmm: no visible global function definition for ‘quantile’
    multlcmm: no visible global function definition for ‘hist’
    plot.dynpred: no visible global function definition for ‘rainbow’
    plot.dynpred: no visible global function definition for ‘par’
    plot.dynpred: no visible binding for global variable ‘plot’
    plot.dynpred: no visible binding for global variable ‘points’
    plot.dynpred: no visible binding for global variable ‘segments’
    plot.dynpred: no visible global function definition for ‘axis’
    plot.dynpred: no visible global function definition for ‘mtext’
    plot.dynpred: no visible binding for global variable ‘lines’
    plot.dynpred: no visible binding for global variable ‘matlines’
    plot.predictlink: no visible global function definition for ‘rainbow’
    predictL.Jointlcmm: no visible binding for global variable ‘na.omit’
    predictL.Jointlcmm: no visible binding for global variable ‘na.fail’
    predictL.Jointlcmm: no visible global function definition for ‘formula’
    predictL.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    predictL.Jointlcmm: no visible global function definition for ‘na.omit’
    predictL.lcmm: no visible binding for global variable ‘na.omit’
    predictL.lcmm: no visible binding for global variable ‘na.fail’
    predictL.lcmm: no visible global function definition for ‘formula’
    predictL.lcmm: no visible global function definition for ‘model.matrix’
    predictL.lcmm: no visible global function definition for ‘na.omit’
    predictL.multlcmm: no visible global function definition for
     ‘model.matrix’
    predictL.multlcmm: no visible global function definition for
     ‘as.formula’
    predictL.multlcmm: no visible global function definition for ‘na.omit’
    predictY.Jointlcmm: no visible binding for global variable ‘na.omit’
    predictY.Jointlcmm: no visible binding for global variable ‘na.fail’
    predictY.Jointlcmm: no visible global function definition for ‘formula’
    predictY.Jointlcmm: no visible global function definition for
     ‘model.matrix’
    predictY.Jointlcmm: no visible global function definition for ‘na.omit’
    predictY.Jointlcmm : doOneDraw: no visible global function definition
     for ‘rnorm’
    predictY.Jointlcmm : f: no visible global function definition for
     ‘quantile’
    predictY.hlme: no visible binding for global variable ‘na.omit’
    predictY.hlme: no visible binding for global variable ‘na.fail’
    predictY.hlme: no visible global function definition for ‘formula’
    predictY.hlme: no visible global function definition for ‘model.matrix’
    predictY.hlme: no visible global function definition for ‘na.omit’
    predictY.lcmm: no visible binding for global variable ‘na.omit’
    predictY.lcmm: no visible binding for global variable ‘na.fail’
    predictY.lcmm: no visible global function definition for ‘formula’
    predictY.lcmm: no visible global function definition for ‘model.matrix’
    predictY.lcmm: no visible global function definition for ‘rnorm’
    predictY.lcmm : f: no visible global function definition for ‘quantile’
    predictY.lcmm: no visible global function definition for ‘pnorm’
    predictY.multlcmm: no visible global function definition for
     ‘model.matrix’
    predictY.multlcmm: no visible global function definition for
     ‘as.formula’
    predictY.multlcmm: no visible global function definition for ‘rnorm’
    predictY.multlcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.Jointlcmm: no visible global function definition for
     ‘na.omit’
    predictlink.Jointlcmm: no visible global function definition for
     ‘rnorm’
    predictlink.Jointlcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.lcmm: no visible global function definition for ‘na.omit’
    predictlink.lcmm: no visible global function definition for ‘rnorm’
    predictlink.lcmm : f: no visible global function definition for
     ‘quantile’
    predictlink.multlcmm: no visible global function definition for
     ‘na.fail’
    predictlink.multlcmm: no visible global function definition for ‘rnorm’
    predictlink.multlcmm : f: no visible global function definition for
     ‘quantile’
    summary.Jointlcmm: no visible global function definition for ‘pchisq’
    summary.hlme: no visible global function definition for ‘pchisq’
    summary.lcmm: no visible global function definition for ‘pchisq’
    summary.multlcmm: no visible global function definition for ‘pchisq’
    summary.multlcmm: no visible global function definition for ‘na.omit’
    Undefined global functions or variables:
     as.formula axis formula get_all_vars hist integrate lines matlines
     matplot median model.frame model.matrix mtext na.fail na.omit na.pass
     par pchisq plot pnorm points qnorm quantile rainbow rnorm sd segments
     terms
    Consider adding
     importFrom("grDevices", "rainbow")
     importFrom("graphics", "axis", "hist", "lines", "matlines", "matplot",
     "mtext", "par", "plot", "points", "segments")
     importFrom("stats", "as.formula", "formula", "get_all_vars",
     "integrate", "median", "model.frame", "model.matrix",
     "na.fail", "na.omit", "na.pass", "pchisq", "pnorm", "qnorm",
     "quantile", "rnorm", "sd", "terms")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.7.2
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
Flavor: r-release-osx-x86_64-mavericks