CRAN Package Check Results for Package lqa

Last updated on 2015-08-01 11:49:02.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0-3 0.81 19.62 20.43 NOTE
r-devel-linux-x86_64-debian-gcc 1.0-3 0.89 18.86 19.75 NOTE
r-devel-linux-x86_64-fedora-clang 1.0-3 37.68 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0-3 34.16 NOTE
r-devel-osx-x86_64-clang 1.0-3 33.46 NOTE
r-devel-windows-ix86+x86_64 1.0-3 4.00 47.00 51.00 NOTE
r-patched-linux-x86_64 1.0-3 0.81 18.54 19.35 NOTE
r-patched-solaris-sparc 1.0-3 222.10 NOTE
r-patched-solaris-x86 1.0-3 46.20 NOTE
r-release-linux-x86_64 1.0-3 0.80 19.56 20.36 NOTE
r-release-osx-x86_64-mavericks 1.0-3 NOTE
r-release-windows-ix86+x86_64 1.0-3 3.00 32.00 35.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0-3 5.00 33.00 38.00 NOTE

Check Details

Version: 1.0-3
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     lqa.control lqa.default lqa.formula lqa.update2 plot.lqa predict.lqa
     print.cv.lqa print.penalty print.pred.lqa print.summary.lqa
     summary.lqa
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    ForwardBoost: no visible global function definition for ‘var’
    GBlockBoost: no visible global function definition for ‘var’
    ao : getpenmat: no visible binding for global variable ‘var’
    ao : getpenmat: no visible global function definition for ‘cor’
    cv.lqa: no visible global function definition for ‘var’
    cv.nng: no visible global function definition for ‘var’
    icb : getpenmat: no visible binding for global variable ‘var’
    icb : getpenmat: no visible global function definition for ‘cor’
    licb : a.coefs: no visible binding for global variable ‘var’
    licb : a.coefs: no visible global function definition for ‘cor’
    lqa.default: no visible global function definition for ‘gaussian’
    lqa.default: no visible global function definition for ‘var’
    lqa.default: no visible binding for global variable ‘var’
    lqa.formula: no visible global function definition for ‘model.response’
    lqa.formula: no visible global function definition for ‘is.empty.model’
    lqa.formula: no visible global function definition for ‘model.matrix’
    lqa.formula: no visible binding for global variable ‘contrasts’
    lqa.formula: no visible global function definition for ‘model.offset’
    lqa.formula: no visible global function definition for ‘model.extract’
    nng.update: no visible global function definition for ‘glm.fit’
    nng.update: no visible global function definition for ‘coef’
    nng.update: no visible global function definition for ‘optim’
    penalreg : getpenmat: no visible binding for global variable ‘var’
    penalreg : getpenmat: no visible global function definition for ‘cor’
    plot.lqa: no visible global function definition for ‘var’
    plot.lqa: no visible global function definition for ‘matplot’
    plot.lqa: no visible global function definition for ‘glm’
    plot.lqa: no visible global function definition for ‘points’
    plot.lqa: no visible global function definition for ‘axis’
    print.summary.lqa: no visible global function definition for ‘quantile’
    print.summary.lqa: no visible global function definition for
     ‘printCoefmat’
    print.summary.lqa: no visible global function definition for ‘naprint’
    summary.lqa: no visible global function definition for ‘residuals’
    weighted.fusion : getpenmat: no visible global function definition for
     ‘var’
    weighted.fusion : getpenmat: no visible global function definition for
     ‘cor’
    Undefined global functions or variables:
     axis coef contrasts cor gaussian glm glm.fit is.empty.model matplot
     model.extract model.matrix model.offset model.response naprint optim
     points printCoefmat quantile residuals var
    Consider adding
     importFrom("graphics", "axis", "matplot", "points")
     importFrom("stats", "coef", "contrasts", "cor", "gaussian", "glm",
     "glm.fit", "is.empty.model", "model.extract",
     "model.matrix", "model.offset", "model.response", "naprint",
     "optim", "printCoefmat", "quantile", "residuals", "var")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.0-3
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'lqa':
     ‘lqa.update2’
    
    S3 methods shown with full name in documentation object 'lqa.control':
     ‘lqa.control’
    
    S3 methods shown with full name in documentation object 'plot.lqa':
     ‘plot.lqa’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    print.summary.lqa: warning in printCoefmat(coefs, P.value = FALSE,
     has.Pvalue = FALSE): partial argument match of 'P.value' to
     'P.values'
Flavors: r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64