Last updated on 2026-01-20 08:48:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.42 | 255.72 | 269.14 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.81 | 301.57 | 312.38 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 29.00 | 323.15 | 352.15 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 416.93 | 446.93 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 195.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.45 | 276.00 | 291.45 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.99 | 270.09 | 284.08 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 207.00 | 217.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 200.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 347.00 | 358.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 243.00 | 267.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [112s/165s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.609, system: 0.050, elapsed: 2.045 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.573, system: 0.093, elapsed: 12.403 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.252, system: 0.022, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.597, system: 0.652, elapsed: 18.178 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.006, elapsed: 0.236 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.793, system: 0.844, elapsed: 33.893 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.672, system: 0.056, elapsed: 2.464 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.534, system: 0.124, elapsed: 13.490 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.015, elapsed: 0.635 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.150, system: 0.735, elapsed: 48.581 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.183 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.304, system: 0.958, elapsed: 66.053 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.560, system: 0.038, elapsed: 2.011 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.593, system: 0.109, elapsed: 12.378 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.316, system: 0.015, elapsed: 0.609 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.596, system: 0.783, elapsed: 13.472 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.005, elapsed: 0.184 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.240, system: 0.350, elapsed: 0.970 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.331, system: 1.349, elapsed: 30.496 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.759, system: 0.051, elapsed: 1.542 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.306, system: 0.052, elapsed: 9.690 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.353, system: 0.031, elapsed: 0.202 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.186, system: 0.992, elapsed: 5.247 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.003, elapsed: 0.176 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 19.622, system: 1.600, elapsed: 11.228 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 41.559, system: 2.797, elapsed: 28.780 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/255s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.678, system: 0.041, elapsed: 5.369 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.622, system: 0.069, elapsed: 27.788 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.016, elapsed: 0.605 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.272, system: 0.406, elapsed: 12.742 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.449 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.535, system: 0.557, elapsed: 48.838 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.634, system: 0.033, elapsed: 4.969 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.548, system: 0.062, elapsed: 28.239 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.015, elapsed: 0.878 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.391, system: 0.431, elapsed: 18.912 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.611 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.527, system: 0.568, elapsed: 55.550 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.581, system: 0.032, elapsed: 5.739 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.855, system: 0.068, elapsed: 32.457 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.014, elapsed: 0.679 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.356, system: 0.416, elapsed: 12.461 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.004, elapsed: 0.456 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.186, system: 0.309, elapsed: 2.007 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.036, system: 0.867, elapsed: 56.001 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.636, system: 0.037, elapsed: 4.973 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.579, system: 0.086, elapsed: 27.505 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.015, elapsed: 0.641 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.323, system: 0.422, elapsed: 13.448 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.004, elapsed: 0.442 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.735, system: 0.596, elapsed: 30.429 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.324, system: 1.180, elapsed: 79.401 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64