CRAN Package Check Results for Package mcprofile

Last updated on 2015-08-03 21:47:27.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2-1 1.63 34.42 36.06 NOTE
r-devel-linux-x86_64-debian-gcc 0.2-1 1.16 34.90 36.05 NOTE
r-devel-linux-x86_64-fedora-clang 0.2-1 68.79 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2-1 65.96 NOTE
r-devel-osx-x86_64-clang 0.2-1 63.43 OK
r-devel-windows-ix86+x86_64 0.2-1 5.00 60.00 65.00 NOTE
r-patched-linux-x86_64 0.2-1 1.26 34.28 35.54 OK
r-patched-solaris-sparc 0.2-1 383.80 OK
r-patched-solaris-x86 0.2-1 94.60 OK
r-release-linux-x86_64 0.2-1 1.43 34.59 36.02 OK
r-release-osx-x86_64-mavericks 0.2-1 NOTE
r-release-windows-ix86+x86_64 0.2-1 6.00 58.00 64.00 OK
r-oldrel-windows-ix86+x86_64 0.2-1 10.00 82.00 92.00 OK

Check Details

Version: 0.2-1
Check: R code for possible problems
Result: NOTE
    confint.mcprofile : <anonymous>: no visible global function definition
     for ‘na.omit’
    confint.mcprofile: no visible global function definition for ‘qnorm’
    confint.mcprofile: no visible global function definition for ‘qt’
    confint.mcprofile: no visible global function definition for ‘vcov’
    confint.mcprofile : <anonymous> : pfun: no visible global function
     definition for ‘predict’
    confint.mcprofile : <anonymous>: no visible global function definition
     for ‘uniroot’
    confint.mcprofile : <anonymous>: no visible global function definition
     for ‘predict’
    confint.mcprofile: no visible global function definition for
     ‘coefficients’
    constructGrid: no visible global function definition for ‘coefficients’
    constructGrid: no visible global function definition for ‘vcov’
    constructGrid: no visible global function definition for ‘qf’
    constructGrid: no visible global function definition for ‘qchisq’
    detvarorglm: no visible global function definition for ‘lm’
    hoa : <anonymous>: no visible global function definition for ‘na.omit’
    hoa : <anonymous> : pfun: no visible global function definition for
     ‘predict’
    hoa : <anonymous>: no visible global function definition for ‘uniroot’
    hoa : <anonymous>: no visible global function definition for ‘predict’
    mcprofile.glm: no visible global function definition for ‘coefficients’
    mcprofile.glm: no visible global function definition for ‘family’
    mcprofile.glm : <anonymous>: no visible global function definition for
     ‘na.omit’
    mcprofile.glm: no visible global function definition for ‘model.frame’
    mcprofile.glm: no visible global function definition for
     ‘model.response’
    mcprofile.glm: no visible global function definition for ‘model.offset’
    mcprofile.glm: no visible global function definition for
     ‘model.weights’
    mcprofile.glm: no visible global function definition for ‘model.matrix’
    mcprofile.glm: no visible global function definition for ‘df.residual’
    orglm.fit: no visible global function definition for ‘gaussian’
    orglm.fit : orr: no visible global function definition for ‘lm.fit’
    orglm.fit : orr: no visible global function definition for
     ‘coefficients’
    plot.mcprofile : <anonymous>: no visible global function definition for
     ‘na.omit’
    plot.mcprofile : <anonymous>: no visible global function definition for
     ‘predict’
    print.mcpSummary: no visible global function definition for
     ‘printCoefmat’
    print.mcprofile: no visible global function definition for
     ‘coefficients’
    print.mcprofile: no visible global function definition for ‘vcov’
    summary.mcprofile: no visible global function definition for
     ‘coefficients’
    summary.mcprofile : <anonymous>: no visible global function definition
     for ‘na.omit’
    summary.mcprofile : ptest: no visible global function definition for
     ‘predict’
    summary.mcprofile: no visible global function definition for ‘pnorm’
    summary.mcprofile: no visible global function definition for ‘pt’
    summary.mcprofile: no visible global function definition for ‘p.adjust’
    summary.mcprofile: no visible global function definition for ‘vcov’
    wald: no visible global function definition for ‘coefficients’
    wald: no visible global function definition for ‘vcov’
    Undefined global functions or variables:
     coefficients df.residual family gaussian lm lm.fit model.frame
     model.matrix model.offset model.response model.weights na.omit
     p.adjust pnorm predict printCoefmat pt qchisq qf qnorm qt uniroot
     vcov
    Consider adding
     importFrom("stats", "coefficients", "df.residual", "family",
     "gaussian", "lm", "lm.fit", "model.frame", "model.matrix",
     "model.offset", "model.response", "model.weights",
     "na.omit", "p.adjust", "pnorm", "predict", "printCoefmat",
     "pt", "qchisq", "qf", "qnorm", "qt", "uniroot", "vcov")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.2-1
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
     Removed 5 rows containing missing values (geom_point).
    Warning in loop_apply(n, do.ply) :
     Removed 5 rows containing missing values (geom_point).
    Warning in loop_apply(n, do.ply) :
     Removed 5 rows containing missing values (geom_point).
    Warning in loop_apply(n, do.ply) :
     Removed 5 rows containing missing values (geom_point).
    Warning in loop_apply(n, do.ply) :
     Removed 50 rows containing missing values (geom_path).
    Warning in loop_apply(n, do.ply) :
     Removed 50 rows containing missing values (geom_path).
    Warning in loop_apply(n, do.ply) :
     Removed 50 rows containing missing values (geom_path).
    Warning in loop_apply(n, do.ply) :
     Removed 50 rows containing missing values (geom_path).
    Warning in loop_apply(n, do.ply) :
     Removed 50 rows containing missing values (geom_path).
    Warning in loop_apply(n, do.ply) :
     Removed 50 rows containing missing values (geom_path).
    Warning in loop_apply(n, do.ply) :
     Removed 50 rows containing missing values (geom_path).
    Quitting from lines 228-230 (mcprofile.Rmd)
    Error: processing vignette 'mcprofile.Rmd' failed with diagnostics:
    unimplemented type (11) in 'duplicate'
    Execution halted
Flavor: r-release-osx-x86_64-mavericks