CRAN Package Check Results for Package mcsm

Last updated on 2014-08-01 05:48:27.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 1.04 44.75 45.80 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 1.07 35.37 36.44 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 78.03 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 73.47 NOTE
r-devel-osx-x86_64-clang 1.0 66.12 NOTE
r-devel-windows-ix86+x86_64 1.0 4.00 52.00 56.00 NOTE
r-patched-linux-x86_64 1.0 0.99 36.87 37.86 NOTE
r-patched-solaris-sparc 1.0 457.10 NOTE
r-patched-solaris-x86 1.0 93.00 NOTE
r-release-linux-ix86 1.0 1.39 47.49 48.88 NOTE
r-release-linux-x86_64 1.0 1.00 37.18 38.18 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-osx-x86_64-snowleopard 1.0 NOTE
r-release-windows-ix86+x86_64 1.0 8.00 77.00 85.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 7.00 73.00 80.00 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     MASS coda
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     MASS coda
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    EMcenso : like: warning in pnorm(the - a, log = T): partial argument
     match of 'log' to 'log.p'
    adapump: warning in rgamma(1, sha = gamma + 10 * alpha): partial
     argument match of 'sha' to 'shape'
    adapump: warning in rgamma(10, sha = data + alpha): partial argument
     match of 'sha' to 'shape'
    adapump: warning in rgamma(1, sha = gamma + (10 * alpha)): partial
     argument match of 'sha' to 'shape'
    gibbsmix: warning in matrix(0, nco = 250, nro = 250): partial argument
     match of 'nro' to 'nrow'
    gibbsmix: warning in matrix(0, nco = 250, nro = 250): partial argument
     match of 'nco' to 'ncol'
    kscheck: warning in rgamma(1, sha = gamma + 10 * alpha): partial
     argument match of 'sha' to 'shape'
    kscheck: warning in rgamma(10, sha = data + alpha): partial argument
     match of 'sha' to 'shape'
    kscheck: warning in rgamma(1, sha = gamma + (10 * alpha)): partial
     argument match of 'sha' to 'shape'
    logima: warning in matrix(0, ncol = 130, nro = 100): partial argument
     match of 'nro' to 'nrow'
    logima: warning in rnorm(N, m = -0.72, sd = 0.55): partial argument
     match of 'm' to 'mean'
    logima: warning in rnorm(N, m = 0.1, sd = 0.212): partial argument
     match of 'm' to 'mean'
    logima: warning in dnorm(sim[, 1], m = -0.72, sd = 0.55): partial
     argument match of 'm' to 'mean'
    logima: warning in dnorm(sim[, 2], m = 0.1, sd = 0.2121): partial
     argument match of 'm' to 'mean'
    logima: warning in sample(1:N, N, rep = TRUE, pro = weit): partial
     argument match of 'rep' to 'replace'
    logima: warning in sample(1:N, N, rep = TRUE, pro = weit): partial
     argument match of 'pro' to 'prob'
    mhmix: warning in matrix(0, nco = 250, nro = 250): partial argument
     match of 'nro' to 'nrow'
    mhmix: warning in matrix(0, nco = 250, nro = 250): partial argument
     match of 'nco' to 'ncol'
    mhmix: warning in dnorm(prop, curmean, lo = T): partial argument match
     of 'lo' to 'log'
    mhmix: warning in dnorm(the[iter, ], meanprop, lo = T): partial
     argument match of 'lo' to 'log'
    mochoice : gocho: warning in sample(c(0, 1), lga, rep = T): partial
     argument match of 'rep' to 'replace'
    pimamh : like: warning in pnorm(q = a + outer(X = b, Y = da[, 2], FUN =
     "*"), log = T): partial argument match of 'log' to 'log.p'
    pimamh : like: warning in pnorm(q = -a - outer(X = b, Y = da[, 2], FUN
     = "*"), log = T): partial argument match of 'log' to 'log.p'
    pimamh: warning in dnorm(prop, mean = curmean, sd = scale, lo = T):
     partial argument match of 'lo' to 'log'
    pimamh: warning in dnorm(the[t - 1, ], mean = propmean, sd = scale, lo
     = T): partial argument match of 'lo' to 'log'
    pimamh: warning in matrix(0, ncol = 130, nro = 100): partial argument
     match of 'nro' to 'nrow'
    pimax : like: warning in pnorm(q = a + outer(X = b, Y = da[, 2], FUN =
     "*"), log = T): partial argument match of 'log' to 'log.p'
    pimax : like: warning in pnorm(q = -a - outer(X = b, Y = da[, 2], FUN =
     "*"), log = T): partial argument match of 'log' to 'log.p'
    pimax : newlike: warning in pnorm(q = a + outer(X = b, Y = da[, 2], FUN
     = "*"), log = T): partial argument match of 'log' to 'log.p'
    pimax : newlike: warning in pnorm(q = -a - outer(X = b, Y = da[, 2],
     FUN = "*"), log = T): partial argument match of 'log' to 'log.p'
    randogibs: warning in sample(c(-1, 0, 1), n * m, rep = T): partial
     argument match of 'rep' to 'replace'
    randogit: warning in sample(c(-1, 0, 1), n * m, rep = TRUE): partial
     argument match of 'rep' to 'replace'
    SAmix : like: no visible binding for global variable da
    betagen: no visible binding for global variable x
    challenge: no visible binding for global variable challenger
    maximple: no visible global function definition for h
    randomeff: no visible binding for global variable Energy
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     'MASS' 'coda'
     Please remove these calls from your code.
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
Flavor: r-release-osx-x86_64-snowleopard