CRAN Package Check Results for Package mice

Last updated on 2015-09-04 16:48:37.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.22 8.44 51.92 60.37 NOTE
r-devel-linux-x86_64-debian-gcc 2.22 8.44 51.92 60.36 NOTE
r-devel-linux-x86_64-fedora-clang 2.22 119.65 NOTE
r-devel-linux-x86_64-fedora-gcc 2.22 112.61 NOTE
r-devel-osx-x86_64-clang 2.22 97.83 NOTE
r-devel-windows-ix86+x86_64 2.22 34.00 120.00 154.00 NOTE
r-patched-linux-x86_64 2.22 8.65 52.99 61.64 NOTE
r-patched-solaris-sparc 2.22 761.50 NOTE
r-patched-solaris-x86 2.22 147.00 NOTE
r-release-linux-x86_64 2.22 8.81 52.35 61.16 NOTE
r-release-osx-x86_64-mavericks 2.22 NOTE
r-release-windows-ix86+x86_64 2.22 43.00 142.00 185.00 NOTE
r-oldrel-windows-ix86+x86_64 2.22 49.00 149.00 198.00 NOTE

Check Details

Version: 2.22
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘lme4’ ‘nlme’ ‘pan’ ‘survival’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.22
Check: R code for possible problems
Result: NOTE
    .mice.impute.2l.groupmean: no visible global function definition for
     ‘aggregate’
    .norm.draw: no visible global function definition for ‘rchisq’
    .norm.draw: no visible global function definition for ‘rnorm’
    .pmm.match: no visible global function definition for ‘runif’
    .r.draw: no visible global function definition for ‘summary.glm’
    .r.draw: no visible global function definition for ‘coef’
    .r.draw: no visible global function definition for ‘rnorm’
    .r.draw: no visible global function definition for ‘runif’
    .y.draw: no visible global function definition for ‘rnorm’
    appendbreak: no visible global function definition for ‘predict’
    appendbreak: no visible global function definition for ‘bs’
    augment: no visible binding for global variable ‘var’
    bwplot.mids: no visible global function definition for
     ‘lattice.getOption’
    bwplot.mids: no visible global function definition for ‘as.formula’
    bwplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    bwplot.mids: no visible global function definition for ‘update’
    densityplot.mids: no visible global function definition for
     ‘lattice.getOption’
    densityplot.mids: no visible global function definition for
     ‘as.formula’
    densityplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    densityplot.mids: no visible global function definition for ‘update’
    df.residual.default: no visible global function definition for ‘coef’
    df.residual.default: no visible global function definition for ‘fitted’
    df.residual.mira: no visible global function definition for
     ‘df.residual’
    extractBS: no visible global function definition for ‘ranef’
    extractBS: no visible global function definition for ‘fixef’
    find.collinear: no visible global function definition for ‘cor’
    fluxplot: no visible global function definition for ‘abline’
    fluxplot: no visible global function definition for ‘text’
    fluxplot: no visible global function definition for ‘points’
    glm.mids: no visible binding for global variable ‘gaussian’
    mdc: no visible global function definition for ‘hcl’
    mdc: no visible global function definition for ‘palette’
    mice : check.data: no visible global function definition for ‘var’
    mice: no visible global function definition for ‘rnorm’
    mice.impute.2l.norm : rwishart: no visible global function definition
     for ‘rchisq’
    mice.impute.2l.norm : rwishart: no visible global function definition
     for ‘rnorm’
    mice.impute.2l.norm: no visible global function definition for ‘rnorm’
    mice.impute.2l.norm: no visible global function definition for ‘rgamma’
    mice.impute.2l.pan: no visible global function definition for ‘runif’
    mice.impute.2l.pan: no visible global function definition for ‘pan’
    mice.impute.2l.pan: no visible global function definition for
     ‘flush.console’
    mice.impute.2lonly.mean: no visible global function definition for
     ‘aggregate’
    mice.impute.cart: no visible global function definition for ‘predict’
    mice.impute.lda: no visible global function definition for ‘predict’
    mice.impute.lda: no visible global function definition for ‘runif’
    mice.impute.logreg: no visible global function definition for
     ‘summary.glm’
    mice.impute.logreg: no visible global function definition for ‘coef’
    mice.impute.logreg: no visible global function definition for ‘rnorm’
    mice.impute.logreg: no visible global function definition for ‘runif’
    mice.impute.logreg.boot: no visible global function definition for
     ‘coef’
    mice.impute.logreg.boot: no visible global function definition for
     ‘runif’
    mice.impute.norm: no visible global function definition for ‘rnorm’
    mice.impute.norm.boot: no visible global function definition for
     ‘rnorm’
    mice.impute.norm.nob: no visible global function definition for ‘rnorm’
    mice.impute.passive: no visible global function definition for
     ‘model.frame’
    mice.impute.polr: no visible global function definition for ‘formula’
    mice.impute.polr: no visible global function definition for ‘predict’
    mice.impute.polr: no visible global function definition for ‘runif’
    mice.impute.polyreg: no visible global function definition for
     ‘formula’
    mice.impute.polyreg: no visible global function definition for
     ‘predict’
    mice.impute.polyreg: no visible global function definition for ‘runif’
    mice.impute.quadratic: no visible binding for global variable
     ‘binomial’
    mice.impute.quadratic: no visible global function definition for
     ‘predict’
    mice.impute.quadratic: no visible binding for global variable
     ‘na.exclude’
    mice.impute.quadratic: no visible global function definition for
     ‘rbinom’
    mice.impute.rf : onetree: no visible global function definition for
     ‘predict’
    mice.impute.sample: no visible global function definition for ‘rnorm’
    mice.theme : filler: no visible global function definition for ‘hcl’
    mids2mplus: no visible global function definition for ‘write.table’
    mids2spss : miceWriteForeignSPSS: no visible global function definition
     for ‘write.table’
    nelsonaalen: no visible global function definition for ‘basehaz’
    nelsonaalen: no visible global function definition for ‘coxph’
    padModel: no visible global function definition for ‘C’
    padModel: no visible binding for global variable ‘contr.treatment’
    padModel: no visible global function definition for ‘model.matrix’
    plot.mids : strip.combined: no visible global function definition for
     ‘panel.rect’
    plot.mids : strip.combined: no visible global function definition for
     ‘panel.text’
    plot.mids: no visible global function definition for ‘as.formula’
    plot.mids: no visible global function definition for ‘update’
    pool: no visible global function definition for ‘coef’
    pool: no visible global function definition for ‘vcov’
    pool: no visible global function definition for ‘fixef’
    pool: no visible global function definition for ‘df.residual’
    pool.compare : LLlogistic: no visible global function definition for
     ‘model.matrix’
    pool.compare : LLlogistic: no visible global function definition for
     ‘model.frame’
    pool.compare: no visible global function definition for ‘formula’
    pool.compare: no visible global function definition for ‘pf’
    pool.scalar: no visible global function definition for ‘var’
    quickpred: no visible global function definition for ‘cor’
    remove.lindep: no visible binding for global variable ‘var’
    remove.lindep: no visible binding for global variable ‘cor’
    remove.lindep: no visible global function definition for ‘cor’
    sampler: no visible global function definition for ‘model.matrix’
    sampler: no visible global function definition for ‘formula’
    sampler: no visible global function definition for ‘model.frame’
    sampler: no visible global function definition for ‘as.formula’
    sampler: no visible binding for global variable ‘var’
    sampler: no visible global function definition for ‘var’
    stripplot.mids: no visible global function definition for
     ‘lattice.getOption’
    stripplot.mids: no visible global function definition for ‘as.formula’
    stripplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    stripplot.mids: no visible global function definition for ‘update’
    summary.mipo: no visible global function definition for ‘pt’
    summary.mipo: no visible global function definition for ‘qt’
    supports.transparent: no visible global function definition for
     ‘dev.capabilities’
    xyplot.mids: no visible global function definition for
     ‘lattice.getOption’
    xyplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    xyplot.mids: no visible global function definition for ‘update’
    Undefined global functions or variables:
     C abline aggregate as.formula basehaz binomial bs coef
     contr.treatment cor coxph dev.capabilities df.residual fitted fixef
     flush.console formula gaussian hcl lattice.getOption
     latticeParseFormula model.frame model.matrix na.exclude palette pan
     panel.rect panel.text pf points predict pt qt ranef rbinom rchisq
     rgamma rnorm runif summary.glm text update var vcov write.table
    Consider adding
     importFrom("grDevices", "dev.capabilities", "hcl", "palette")
     importFrom("graphics", "abline", "points", "text")
     importFrom("stats", "C", "aggregate", "as.formula", "binomial", "coef",
     "contr.treatment", "cor", "df.residual", "fitted",
     "formula", "gaussian", "model.frame", "model.matrix",
     "na.exclude", "pf", "predict", "pt", "qt", "rbinom",
     "rchisq", "rgamma", "rnorm", "runif", "summary.glm",
     "update", "var", "vcov")
     importFrom("utils", "flush.console", "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 2.22
Check: R code for possible problems
Result: NOTE
    appendbreak: no visible global function definition for ‘bs’
    bwplot.mids: no visible global function definition for
     ‘lattice.getOption’
    bwplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    densityplot.mids: no visible global function definition for
     ‘lattice.getOption’
    densityplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    extractBS: no visible global function definition for ‘ranef’
    extractBS: no visible global function definition for ‘fixef’
    mice.impute.2l.pan: no visible global function definition for ‘pan’
    nelsonaalen: no visible global function definition for ‘basehaz’
    nelsonaalen: no visible global function definition for ‘coxph’
    plot.mids : strip.combined: no visible global function definition for
     ‘panel.rect’
    plot.mids : strip.combined: no visible global function definition for
     ‘panel.text’
    pool: no visible global function definition for ‘fixef’
    stripplot.mids: no visible global function definition for
     ‘lattice.getOption’
    stripplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    xyplot.mids: no visible global function definition for
     ‘lattice.getOption’
    xyplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    Undefined global functions or variables:
     basehaz bs coxph fixef lattice.getOption latticeParseFormula pan
     panel.rect panel.text ranef
Flavor: r-devel-osx-x86_64-clang

Version: 2.22
Check: R code for possible problems
Result: NOTE
    appendbreak: no visible global function definition for ‘bs’
    bwplot.mids: no visible global function definition for
     ‘lattice.getOption’
    bwplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    densityplot.mids: no visible global function definition for
     ‘lattice.getOption’
    densityplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    extractBS: no visible global function definition for ‘ranef’
    extractBS: no visible global function definition for ‘fixef’
    mice.impute.2l.pan: no visible global function definition for ‘pan’
    nelsonaalen: no visible global function definition for ‘basehaz’
    nelsonaalen: no visible global function definition for ‘coxph’
    plot.mids : strip.combined: no visible global function definition for
     ‘panel.rect’
    plot.mids : strip.combined: no visible global function definition for
     ‘panel.text’
    pool: no visible global function definition for ‘fixef’
    stripplot.mids: no visible global function definition for
     ‘lattice.getOption’
    stripplot.mids: no visible global function definition for
     ‘latticeParseFormula’
    xyplot.mids: no visible global function definition for
     ‘lattice.getOption’
    xyplot.mids: no visible global function definition for
     ‘latticeParseFormula’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64