Last updated on 2019-12-10 17:50:06 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2 | 32.62 | 69.28 | 101.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.2 | 20.15 | 51.60 | 71.75 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.2 | 130.50 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2 | 120.42 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.2 | 58.00 | 160.00 | 218.00 | OK | |
| r-devel-windows-ix86+x86_64-gcc8 | 1.2 | 55.00 | 174.00 | 229.00 | OK | |
| r-patched-linux-x86_64 | 1.2 | 23.76 | 50.75 | 74.51 | ERROR | |
| r-patched-solaris-x86 | 1.2 | 157.80 | OK | |||
| r-release-linux-x86_64 | 1.2 | 23.19 | 62.82 | 86.01 | OK | |
| r-release-windows-ix86+x86_64 | 1.2 | 50.00 | 121.00 | 171.00 | OK | |
| r-release-osx-x86_64 | 1.2 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 1.2 | 44.00 | 114.00 | 158.00 | OK | |
| r-oldrel-osx-x86_64 | 1.2 | OK |
Version: 1.2
Check: examples
Result: ERROR
Running examples in ‘micropan-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: entrezDownload
> ### Title: Downloading genome data
> ### Aliases: entrezDownload
>
> ### ** Examples
>
> # Accession numbers for the chromosome and plasmid of Buchnera aphidicola, strain APS
> acc <- "BA000003.2,AP001071.1"
> tf <- tempfile(pattern="Buchnera_aphidicola",fileext=".fasta")
> txt <- entrezDownload(acc,out.file=tf)
Downloading genome...Warning in url(adr, open = "rt") :
cannot open URL 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nucleotide&id=BA000003.2,AP001071.1&retmode=text&rettype=fasta': HTTP status was '502 Bad Gateway'
Error in url(adr, open = "rt") :
cannot open the connection to 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nucleotide&id=BA000003.2,AP001071.1&retmode=text&rettype=fasta'
Calls: entrezDownload -> url
Execution halted
Flavor: r-patched-linux-x86_64