CRAN Package Check Results for Package misc3d

Last updated on 2014-04-24 03:47:48.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.8-4 0.83 23.72 24.55 NOTE
r-devel-linux-x86_64-debian-gcc 0.8-4 0.81 23.96 24.77 NOTE
r-devel-linux-x86_64-fedora-clang 0.8-4 45.60 NOTE
r-devel-linux-x86_64-fedora-gcc 0.8-4 44.46 NOTE
r-devel-osx-x86_64-clang 0.8-4 41.38 NOTE
r-devel-osx-x86_64-gcc 0.8-4 NOTE
r-devel-windows-ix86+x86_64 0.8-4 2.00 35.00 37.00 NOTE
r-patched-linux-x86_64 0.8-4 0.88 23.84 24.72 NOTE
r-patched-solaris-sparc 0.8-4 178.10 NOTE --no-examples
r-patched-solaris-x86 0.8-4 65.00 NOTE
r-release-linux-ix86 0.8-4 2.00 44.00 46.00 NOTE
r-release-linux-x86_64 0.8-4 0.80 23.86 24.66 NOTE
r-release-osx-x86_64-mavericks 0.8-4 ERROR
r-release-windows-ix86+x86_64 0.8-4 2.00 38.00 40.00 NOTE
r-oldrel-windows-ix86+x86_64 0.8-4 3.00 43.00 46.00 NOTE

Check Details

Version: 0.8-4
Check: dependencies in R code
Result: NOTE
    There are ::: calls to the package's namespace in its code. A package
     almost never needs to use ::: for its own objects:
     ‘canonicalizeAndMergeScene’ ‘colorScene’ ‘t2ve’ ‘vertexNormals’
     ‘vertexTriangles’
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-osx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.8-4
Flags: --no-examples
Check: dependencies in R code
Result: NOTE
    There are ::: calls to the package's namespace in its code. A package
     almost never needs to use ::: for its own objects:
     ‘canonicalizeAndMergeScene’ ‘colorScene’ ‘t2ve’ ‘vertexNormals’
     ‘vertexTriangles’
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-patched-solaris-sparc

Version: 0.8-4
Check: examples
Result: ERROR
    Running examples in ‘misc3d-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: slices3d
    > ### Title: Interactive Image Slices of 3D or 4D Volume Data
    > ### Aliases: slices3d
    > ### Keywords: hplot
    >
    > ### ** Examples
    >
    > #Example 1: View of a mixture of three tri-variate normal densities
    > nmix3 <- function(x, y, z, m, s) {
    + 0.4 * dnorm(x, m, s) * dnorm(y, m, s) * dnorm(z, m, s) +
    + 0.3 * dnorm(x, -m, s) * dnorm(y, -m, s) * dnorm(z, -m, s) +
    + 0.3 * dnorm(x, m, s) * dnorm(y, -1.5 * m, s) * dnorm(z, m, s)
    + }
    > x<-seq(-2, 2, len=40)
    > g<-expand.grid(x = x, y = x, z = x)
    > v<-array(nmix3(g$x,g$y,g$z, .5,.5), c(40,40,40))
    > slices3d(vol1=v, main="View of a mixture of three tri-variate normals", col1=heat.colors(256))
    Loading required package: tkrplot
    Loading required package: tcltk
    <environment: 0x7fe9615017f8>
    >
    > ## Not run:
    > ##D #Example 2: Put a z-map from fMRI data on top of a structure
    > ##D # image. The threshold value of the z-map is 2.
    > ##D library(AnalyzeFMRI)
    > ##D temp<-f.read.analyze.volume("standard.img")
    > ##D z<-f.read.analyze.volume("z-map.img")
    > ##D slices3d(vol1=temp, vol2=z[,,,1], rlim2=c(2,Inf),col2=heat.colors(20),
    > ##D main="Regions above threshold values.")
    > ##D
    > ## End(Not run)
    >
    >
    >
    > cleanEx()
    
     *** caught segfault ***
    address 0x11700001, cause 'memory not mapped'
    aborting ...
Flavor: r-release-osx-x86_64-mavericks