CRAN Package Check Results for Package misc3d

Last updated on 2016-06-25 21:47:29.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 0.8-4 0.81 22.71 23.52 NOTE
r-devel-linux-x86_64-fedora-clang 0.8-4 39.36 NOTE
r-devel-linux-x86_64-fedora-gcc 0.8-4 36.38 NOTE
r-devel-osx-x86_64-clang 0.8-4 33.32 NOTE
r-devel-windows-ix86+x86_64 0.8-4 5.00 49.00 54.00 NOTE
r-patched-linux-x86_64 0.8-4 0.89 22.93 23.82 NOTE
r-patched-solaris-sparc 0.8-4 171.90 NOTE --no-examples
r-patched-solaris-x86 0.8-4 54.50 NOTE
r-release-linux-x86_64 0.8-4 0.74 22.86 23.59 NOTE
r-release-osx-x86_64-mavericks 0.8-4 ERROR
r-release-windows-ix86+x86_64 0.8-4 5.00 44.00 49.00 NOTE
r-oldrel-windows-ix86+x86_64 0.8-4 5.00 55.00 60.00 NOTE

Check Details

Version: 0.8-4
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘rgl’ ‘tkrplot’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    There are ::: calls to the package's namespace in its code. A package
     almost never needs to use ::: for its own objects:
     ‘canonicalizeAndMergeScene’ ‘colorScene’ ‘t2ve’ ‘vertexNormals’
     ‘vertexTriangles’
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.8-4
Check: R code for possible problems
Result: NOTE
    drawScene.rgl: no visible global function definition for ‘rgl.cur’
    drawScene.rgl: no visible global function definition for ‘open3d’
    drawScene.rgl: no visible global function definition for ‘clear3d’
    drawScene.rgl: no visible global function definition for ‘triangles3d’
    image3d: no visible global function definition for ‘quantile’
    image3d: no visible global function definition for ‘heat.colors’
    image3d: no visible global function definition for ‘clear3d’
    image3d: no visible global function definition for ‘runif’
    image3d: no visible global function definition for ‘sprites3d’
    image3d: no visible global function definition for ‘points3d’
    interpolateVertexColors: no visible global function definition for
     ‘rgb’
    kde3d: no visible binding for global variable ‘dnorm’
    perspLighting: no visible global function definition for ‘col2rgb’
    perspLighting: no visible global function definition for ‘rgb’
    phongLighting: no visible global function definition for ‘col2rgb’
    phongLighting: no visible global function definition for ‘rgb’
    render.standard: no visible global function definition for ‘plot’
    render.standard: no visible global function definition for ‘polygon’
    renderScene: no visible global function definition for ‘col2rgb’
    renderScene: no visible global function definition for ‘rgb’
    saveTrianglesAsASY: no visible global function definition for ‘col2rgb’
    saveTrianglesAsIDTF: no visible global function definition for
     ‘col2rgb’
    slices3d: no visible global function definition for ‘gray.colors’
    slices3d : mkimg : f: no visible global function definition for ‘par’
    slices3d : mkimg : f: no visible global function definition for ‘image’
    slices3d : mkimg : f: no visible global function definition for ‘lines’
    slices3d : mkimg: no visible global function definition for ‘tkrplot’
    slices3d : mkscale : f: no visible global function definition for
     ‘tclvalue’
    slices3d : mkscale : f: no visible global function definition for
     ‘tkrreplot’
    slices3d : mkscale : f: no visible global function definition for
     ‘tkconfigure’
    slices3d : mkscale: no visible global function definition for ‘tkframe’
    slices3d : mkscale: no visible global function definition for ‘tkscale’
    slices3d : mkscale: no visible global function definition for ‘tklabel’
    slices3d : mkscale: no visible global function definition for ‘tkgrid’
    slices3d : move: no visible global function definition for ‘tkbind’
    slices3d : move : <anonymous>: no visible global function definition
     for ‘tkwinfo’
    slices3d : move : <anonymous>: no visible global function definition
     for ‘tkrreplot’
    slices3d : move : <anonymous>: no visible global function definition
     for ‘tclvalue<-’
    slices3d : overlay: no visible global function definition for ‘col2rgb’
    slices3d : overlay: no visible global function definition for ‘rgb’
    slices3d: no visible global function definition for ‘tktoplevel’
    slices3d: no visible global function definition for ‘tktitle<-’
    slices3d: no visible binding for global variable ‘tclVar’
    slices3d: no visible global function definition for ‘tkgrid’
    vertexColors: no visible global function definition for ‘col2rgb’
    Undefined global functions or variables:
     clear3d col2rgb dnorm gray.colors heat.colors image lines open3d par
     plot points3d polygon quantile rgb rgl.cur runif sprites3d tclVar
     tclvalue tclvalue<- tkbind tkconfigure tkframe tkgrid tklabel tkrplot
     tkrreplot tkscale tktitle<- tktoplevel tkwinfo triangles3d
    Consider adding
     importFrom("grDevices", "col2rgb", "gray.colors", "heat.colors", "rgb")
     importFrom("graphics", "image", "lines", "par", "plot", "polygon")
     importFrom("stats", "dnorm", "quantile", "runif")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.8-4
Flags: --no-examples
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘rgl’ ‘tkrplot’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    There are ::: calls to the package's namespace in its code. A package
     almost never needs to use ::: for its own objects:
     ‘canonicalizeAndMergeScene’ ‘colorScene’ ‘t2ve’ ‘vertexNormals’
     ‘vertexTriangles’
Flavor: r-patched-solaris-sparc

Version: 0.8-4
Flags: --no-examples
Check: R code for possible problems
Result: NOTE
    drawScene.rgl: no visible global function definition for ‘rgl.cur’
    drawScene.rgl: no visible global function definition for ‘open3d’
    drawScene.rgl: no visible global function definition for ‘clear3d’
    drawScene.rgl: no visible global function definition for ‘triangles3d’
    image3d: no visible global function definition for ‘quantile’
    image3d: no visible global function definition for ‘heat.colors’
    image3d: no visible global function definition for ‘clear3d’
    image3d: no visible global function definition for ‘runif’
    image3d: no visible global function definition for ‘sprites3d’
    image3d: no visible global function definition for ‘points3d’
    interpolateVertexColors: no visible global function definition for
     ‘rgb’
    kde3d: no visible binding for global variable ‘dnorm’
    perspLighting: no visible global function definition for ‘col2rgb’
    perspLighting: no visible global function definition for ‘rgb’
    phongLighting: no visible global function definition for ‘col2rgb’
    phongLighting: no visible global function definition for ‘rgb’
    render.standard: no visible global function definition for ‘plot’
    render.standard: no visible global function definition for ‘polygon’
    renderScene: no visible global function definition for ‘col2rgb’
    renderScene: no visible global function definition for ‘rgb’
    saveTrianglesAsASY: no visible global function definition for ‘col2rgb’
    saveTrianglesAsIDTF: no visible global function definition for
     ‘col2rgb’
    slices3d: no visible global function definition for ‘gray.colors’
    slices3d : mkimg : f: no visible global function definition for ‘par’
    slices3d : mkimg : f: no visible global function definition for ‘image’
    slices3d : mkimg : f: no visible global function definition for ‘lines’
    slices3d : mkimg: no visible global function definition for ‘tkrplot’
    slices3d : mkscale : f: no visible global function definition for
     ‘tclvalue’
    slices3d : mkscale : f: no visible global function definition for
     ‘tkrreplot’
    slices3d : mkscale : f: no visible global function definition for
     ‘tkconfigure’
    slices3d : mkscale: no visible global function definition for ‘tkframe’
    slices3d : mkscale: no visible global function definition for ‘tkscale’
    slices3d : mkscale: no visible global function definition for ‘tklabel’
    slices3d : mkscale: no visible global function definition for ‘tkgrid’
    slices3d : move: no visible global function definition for ‘tkbind’
    slices3d : move : <anonymous>: no visible global function definition
     for ‘tkwinfo’
    slices3d : move : <anonymous>: no visible global function definition
     for ‘tkrreplot’
    slices3d : move : <anonymous>: no visible global function definition
     for ‘tclvalue<-’
    slices3d : overlay: no visible global function definition for ‘col2rgb’
    slices3d : overlay: no visible global function definition for ‘rgb’
    slices3d: no visible global function definition for ‘tktoplevel’
    slices3d: no visible global function definition for ‘tktitle<-’
    slices3d: no visible binding for global variable ‘tclVar’
    slices3d: no visible global function definition for ‘tkgrid’
    vertexColors: no visible global function definition for ‘col2rgb’
    Undefined global functions or variables:
     clear3d col2rgb dnorm gray.colors heat.colors image lines open3d par
     plot points3d polygon quantile rgb rgl.cur runif sprites3d tclVar
     tclvalue tclvalue<- tkbind tkconfigure tkframe tkgrid tklabel tkrplot
     tkrreplot tkscale tktitle<- tktoplevel tkwinfo triangles3d
    Consider adding
     importFrom("grDevices", "col2rgb", "gray.colors", "heat.colors", "rgb")
     importFrom("graphics", "image", "lines", "par", "plot", "polygon")
     importFrom("stats", "dnorm", "quantile", "runif")
    to your NAMESPACE file.
Flavor: r-patched-solaris-sparc

Version: 0.8-4
Check: examples
Result: ERROR
    Running examples in ‘misc3d-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: slices3d
    > ### Title: Interactive Image Slices of 3D or 4D Volume Data
    > ### Aliases: slices3d
    > ### Keywords: hplot
    >
    > ### ** Examples
    >
    > #Example 1: View of a mixture of three tri-variate normal densities
    > nmix3 <- function(x, y, z, m, s) {
    + 0.4 * dnorm(x, m, s) * dnorm(y, m, s) * dnorm(z, m, s) +
    + 0.3 * dnorm(x, -m, s) * dnorm(y, -m, s) * dnorm(z, -m, s) +
    + 0.3 * dnorm(x, m, s) * dnorm(y, -1.5 * m, s) * dnorm(z, m, s)
    + }
    > x<-seq(-2, 2, len=40)
    > g<-expand.grid(x = x, y = x, z = x)
    > v<-array(nmix3(g$x,g$y,g$z, .5,.5), c(40,40,40))
    > slices3d(vol1=v, main="View of a mixture of three tri-variate normals", col1=heat.colors(256))
    Loading required package: tkrplot
    Loading required package: tcltk
    Invalid MIT-MAGIC-COOKIE-1 keyWarning in fun(libname, pkgname) : couldn't connect to display ":0"
    Invalid MIT-MAGIC-COOKIE-1 keyWarning: loading Rplot failed
    Error in structure(.External(.C_dotTclObjv, objv), class = "tclObj") :
     [tcl] invalid command name "toplevel".
    Calls: slices3d ... tktoplevel -> tkwidget -> tcl -> .Tcl.objv -> structure
    Execution halted
Flavor: r-release-osx-x86_64-mavericks

Version: 0.8-4
Check: R code for possible problems
Result: NOTE
    drawScene.rgl: no visible global function definition for 'rgl.cur'
    drawScene.rgl: no visible global function definition for 'open3d'
    drawScene.rgl: no visible global function definition for 'clear3d'
    drawScene.rgl: no visible global function definition for 'triangles3d'
    image3d: no visible global function definition for 'clear3d'
    image3d: no visible global function definition for 'sprites3d'
    image3d: no visible global function definition for 'points3d'
    slices3d : mkimg: no visible global function definition for 'tkrplot'
    slices3d : mkscale : f: no visible global function definition for
     'tclvalue'
    slices3d : mkscale : f: no visible global function definition for
     'tkrreplot'
    slices3d : mkscale : f: no visible global function definition for
     'tkconfigure'
    slices3d : mkscale: no visible global function definition for 'tkframe'
    slices3d : mkscale: no visible global function definition for 'tkscale'
    slices3d : mkscale: no visible global function definition for 'tklabel'
    slices3d : mkscale: no visible global function definition for 'tkgrid'
    slices3d : move: no visible global function definition for 'tkbind'
    slices3d : move : <anonymous>: no visible global function definition
     for 'tkwinfo'
    slices3d : move : <anonymous>: no visible global function definition
     for 'tkrreplot'
    slices3d : move : <anonymous>: no visible global function definition
     for 'tclvalue<-'
    slices3d: no visible global function definition for 'tktoplevel'
    slices3d: no visible global function definition for 'tktitle<-'
    slices3d: no visible binding for global variable 'tclVar'
    slices3d: no visible global function definition for 'tkgrid'
Flavor: r-oldrel-windows-ix86+x86_64