CRAN Package Check Results for Package mixPHM

Last updated on 2014-07-30 03:48:22.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.7.0 0.82 39.99 40.81 NOTE
r-devel-linux-x86_64-debian-gcc 0.7.0 0.76 39.93 40.69 NOTE
r-devel-linux-x86_64-fedora-clang 0.7.0 83.46 NOTE
r-devel-linux-x86_64-fedora-gcc 0.7.0 79.99 NOTE
r-devel-osx-x86_64-clang 0.7.0 66.72 NOTE
r-devel-windows-ix86+x86_64 0.7.0 3.00 68.00 71.00 NOTE
r-patched-linux-x86_64 0.7.0 0.78 40.81 41.59 NOTE
r-patched-solaris-sparc 0.7.0 480.80 NOTE
r-patched-solaris-x86 0.7.0 95.50 NOTE
r-release-linux-ix86 0.7.0 1.14 50.72 51.86 NOTE
r-release-linux-x86_64 0.7.0 0.79 41.39 42.18 NOTE
r-release-osx-x86_64-mavericks 0.7.0 NOTE
r-release-osx-x86_64-snowleopard 0.7.0 NOTE
r-release-windows-ix86+x86_64 0.7.0 3.00 63.00 66.00 NOTE
r-oldrel-windows-ix86+x86_64 0.7.0 3.00 66.00 69.00 NOTE

Check Details

Version: 0.7.0
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     lattice survival
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.7.0
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'plot.hazard':
     plot.hazard plot.survival plot.profile
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See the chapter Writing R documentation files in the Writing R
    Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.7.0
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     COPYRIGHTS
    Copyright information should be in file inst/COPYRIGHTS
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.7.0
Check: Rd line widths
Result: NOTE
    Rd file 'msBIC.Rd':
     \usage lines wider than 90 characters:
     msBIC(x, K, method = "all", Sdist = "weibull", cutpoint = NULL, EMoption = "classification", EMstop = 0.01, maxiter = 100)
    
    Rd file 'plot.hazard.Rd':
     \usage lines wider than 90 characters:
     plot.hazard (x, gr.subset, var.subset, group = TRUE, xlim = NA, ylim = NA, xlab = "Survival Time", ylab = "Hazard Function",
     plot.survival (x, gr.subset, var.subset, group = TRUE, xlim = NA, ylim = NA, xlab = "Survival Time", ylab = "Survival Function",
     main = "Survival Functions", type = "l", lty = 1, lwd = 1, col = NA, legpos = "right", ...)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.7.0
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     'lattice' 'survival'
     These packages need to be imported from for the case when
     this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
Flavor: r-release-osx-x86_64-snowleopard