CRAN Package Check Results for Package mizer

Last updated on 2016-05-05 20:47:59.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 0.2 1.70 249.74 251.44 NOTE
r-devel-linux-x86_64-fedora-clang 0.2 474.41 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2 466.45 NOTE
r-devel-osx-x86_64-clang 0.2 498.55 NOTE
r-devel-windows-ix86+x86_64 0.2 5.00 43.00 48.00 NOTE --no-vignettes
r-patched-linux-x86_64 0.2 1.58 232.52 234.10 NOTE
r-patched-solaris-sparc 0.2 3435.40 NOTE
r-patched-solaris-x86 0.2 702.30 NOTE
r-release-linux-x86_64 0.2 1.61 239.23 240.83 NOTE
r-release-osx-x86_64-mavericks 0.2 OK
r-release-windows-ix86+x86_64 0.2 5.00 43.00 48.00 NOTE --no-vignettes
r-oldrel-windows-ix86+x86_64 0.2 8.00 41.00 49.00 NOTE --no-vignettes

Check Details

Version: 0.2
Check: R code for possible problems
Result: NOTE
    getFMort,MizerSim-missing: warning in get_time_elements(object,
     time_range, slot = "effort"): partial argument match of ‘slot’ to
     ‘slot_name’
    getFMortGear,MizerSim-missing: warning in get_time_elements(object,
     time_range, slot = "effort"): partial argument match of ‘slot’ to
     ‘slot_name’
    plotFMort,MizerSim: warning in scale_y_continuous(name = "Total fishing
     mortality", lim = c(0, max(plot_dat$value))): partial argument match
     of ‘lim’ to ‘limits’
    plotFeedingLevel,MizerSim: warning in scale_y_continuous(name =
     "Feeding Level", lim = c(0, 1)): partial argument match of ‘lim’ to
     ‘limits’
    plotM2,MizerSim: warning in scale_y_continuous(name = "M2", lim = c(0,
     max(plot_dat$value))): partial argument match of ‘lim’ to ‘limits’
    MizerParams,data.frame-matrix: no visible global function definition
     for ‘combn’
    getCommunitySlope,MizerSim : <anonymous>: no visible global function
     definition for ‘lm’
    plotBiomass,MizerSim: no visible binding for global variable ‘time’
    plotBiomass,MizerSim: no visible binding for global variable ‘value’
    plotBiomass,MizerSim: no visible binding for global variable ‘Species’
    plotFMort,MizerSim: no visible binding for global variable ‘w’
    plotFMort,MizerSim: no visible binding for global variable ‘value’
    plotFMort,MizerSim: no visible binding for global variable ‘Species’
    plotFeedingLevel,MizerSim: no visible binding for global variable ‘w’
    plotFeedingLevel,MizerSim: no visible binding for global variable
     ‘value’
    plotFeedingLevel,MizerSim: no visible binding for global variable
     ‘Species’
    plotM2,MizerSim: no visible binding for global variable ‘w’
    plotM2,MizerSim: no visible binding for global variable ‘value’
    plotM2,MizerSim: no visible binding for global variable ‘Species’
    plotSpectra,MizerSim: no visible binding for global variable ‘w’
    plotSpectra,MizerSim: no visible binding for global variable ‘value’
    plotSpectra,MizerSim: no visible binding for global variable ‘Species’
    plotYield,MizerSim: no visible binding for global variable ‘time’
    plotYield,MizerSim: no visible binding for global variable ‘value’
    plotYield,MizerSim: no visible binding for global variable ‘Species’
    plotYieldGear,MizerSim: no visible binding for global variable ‘time’
    plotYieldGear,MizerSim: no visible binding for global variable ‘value’
    plotYieldGear,MizerSim: no visible binding for global variable
     ‘Species’
    plotYieldGear,MizerSim: no visible binding for global variable ‘gear’
    Undefined global functions or variables:
     Species combn gear lm time value w
    Consider adding
     importFrom("stats", "lm", "time")
     importFrom("utils", "combn")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.2
Flags: --no-vignettes
Check: R code for possible problems
Result: NOTE
    getFMort,MizerSim-missing: warning in get_time_elements(object,
     time_range, slot = "effort"): partial argument match of 'slot' to
     'slot_name'
    getFMortGear,MizerSim-missing: warning in get_time_elements(object,
     time_range, slot = "effort"): partial argument match of 'slot' to
     'slot_name'
    plotFMort,MizerSim: warning in scale_y_continuous(name = "Total fishing
     mortality", lim = c(0, max(plot_dat$value))): partial argument match
     of 'lim' to 'limits'
    plotFeedingLevel,MizerSim: warning in scale_y_continuous(name =
     "Feeding Level", lim = c(0, 1)): partial argument match of 'lim' to
     'limits'
    plotM2,MizerSim: warning in scale_y_continuous(name = "M2", lim = c(0,
     max(plot_dat$value))): partial argument match of 'lim' to 'limits'
    MizerParams,data.frame-matrix: no visible global function definition
     for 'combn'
    getCommunitySlope,MizerSim : <anonymous>: no visible global function
     definition for 'lm'
    plotBiomass,MizerSim: no visible binding for global variable 'time'
    plotBiomass,MizerSim: no visible binding for global variable 'value'
    plotBiomass,MizerSim: no visible binding for global variable 'Species'
    plotFMort,MizerSim: no visible binding for global variable 'w'
    plotFMort,MizerSim: no visible binding for global variable 'value'
    plotFMort,MizerSim: no visible binding for global variable 'Species'
    plotFeedingLevel,MizerSim: no visible binding for global variable 'w'
    plotFeedingLevel,MizerSim: no visible binding for global variable
     'value'
    plotFeedingLevel,MizerSim: no visible binding for global variable
     'Species'
    plotM2,MizerSim: no visible binding for global variable 'w'
    plotM2,MizerSim: no visible binding for global variable 'value'
    plotM2,MizerSim: no visible binding for global variable 'Species'
    plotSpectra,MizerSim: no visible binding for global variable 'w'
    plotSpectra,MizerSim: no visible binding for global variable 'value'
    plotSpectra,MizerSim: no visible binding for global variable 'Species'
    plotYield,MizerSim: no visible binding for global variable 'time'
    plotYield,MizerSim: no visible binding for global variable 'value'
    plotYield,MizerSim: no visible binding for global variable 'Species'
    plotYieldGear,MizerSim: no visible binding for global variable 'time'
    plotYieldGear,MizerSim: no visible binding for global variable 'value'
    plotYieldGear,MizerSim: no visible binding for global variable
     'Species'
    plotYieldGear,MizerSim: no visible binding for global variable 'gear'
    Undefined global functions or variables:
     Species combn gear lm time value w
    Consider adding
     importFrom("stats", "lm", "time")
     importFrom("utils", "combn")
    to your NAMESPACE file.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 0.2
Flags: --no-vignettes
Check: R code for possible problems
Result: NOTE
    getFMort,MizerSim-missing : .local: warning in
     get_time_elements(object, time_range, slot = "effort"): partial
     argument match of 'slot' to 'slot_name'
    getFMortGear,MizerSim-missing : .local: warning in
     get_time_elements(object, time_range, slot = "effort"): partial
     argument match of 'slot' to 'slot_name'
    plotFMort,MizerSim : .local: warning in scale_y_continuous(name =
     "Total fishing mortality", lim = c(0, max(plot_dat$value))): partial
     argument match of 'lim' to 'limits'
    plotFeedingLevel,MizerSim : .local: warning in scale_y_continuous(name
     = "Feeding Level", lim = c(0, 1)): partial argument match of 'lim' to
     'limits'
    plotM2,MizerSim : .local: warning in scale_y_continuous(name = "M2",
     lim = c(0, max(plot_dat$value))): partial argument match of 'lim' to
     'limits'
    plotBiomass,MizerSim : .local: no visible binding for global variable
     'value'
    plotBiomass,MizerSim : .local: no visible binding for global variable
     'Species'
    plotFMort,MizerSim : .local: no visible binding for global variable 'w'
    plotFMort,MizerSim : .local: no visible binding for global variable
     'value'
    plotFMort,MizerSim : .local: no visible binding for global variable
     'Species'
    plotFeedingLevel,MizerSim : .local: no visible binding for global
     variable 'w'
    plotFeedingLevel,MizerSim : .local: no visible binding for global
     variable 'value'
    plotFeedingLevel,MizerSim : .local: no visible binding for global
     variable 'Species'
    plotM2,MizerSim : .local: no visible binding for global variable 'w'
    plotM2,MizerSim : .local: no visible binding for global variable
     'value'
    plotM2,MizerSim : .local: no visible binding for global variable
     'Species'
    plotSpectra,MizerSim : .local: no visible binding for global variable
     'w'
    plotSpectra,MizerSim : .local: no visible binding for global variable
     'value'
    plotSpectra,MizerSim : .local: no visible binding for global variable
     'Species'
    plotYield,MizerSim : .local: no visible binding for global variable
     'value'
    plotYield,MizerSim : .local: no visible binding for global variable
     'Species'
    plotYieldGear,MizerSim : .local: no visible binding for global variable
     'value'
    plotYieldGear,MizerSim : .local: no visible binding for global variable
     'Species'
    plotYieldGear,MizerSim : .local: no visible binding for global variable
     'gear'
Flavor: r-oldrel-windows-ix86+x86_64