CRAN Package Check Results for Package mlDNA

Last updated on 2014-12-21 09:51:31.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1 7.11 79.90 87.01 NOTE
r-devel-linux-x86_64-debian-gcc 1.1 6.78 76.77 83.56 NOTE
r-devel-linux-x86_64-fedora-clang 1.1 198.33 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1 183.05 NOTE
r-devel-osx-x86_64-clang 1.1 166.91 NOTE
r-devel-windows-ix86+x86_64 1.1 30.00 134.00 164.00 NOTE
r-patched-linux-x86_64 1.1 7.46 81.98 89.44 NOTE
r-patched-solaris-sparc 1.1 1053.00 NOTE
r-patched-solaris-x86 1.1 264.30 NOTE
r-release-linux-ix86 1.1 8.77 97.20 105.96 NOTE
r-release-linux-x86_64 1.1 7.39 83.82 91.21 NOTE
r-release-osx-x86_64-mavericks 1.1 ERROR
r-release-osx-x86_64-snowleopard 1.1 OK
r-release-windows-ix86+x86_64 1.1 30.00 137.00 167.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1 34.00 152.00 186.00 NOTE

Check Details

Version: 1.1
Check: R code for possible problems
Result: NOTE
    .DNA.connectivitylist : .fun_conn_idx: no visible global function
     definition for ‘attach.big.matrix’
    .DNA.distance: no visible global function definition for
     ‘as.big.matrix’
    .checkadjmatrix: no visible global function definition for
     ‘is.big.matrix’
    .filterLowCorrelation: no visible global function definition for
     ‘is.big.matrix’
    .network.differences : .fun_distance: no visible global function
     definition for ‘attach.big.matrix’
    .uniqueTissues: no visible global function definition for ‘str_sub’
    geneRanker: no visible global function definition for ‘RankingTstat’
    geneRanker: no visible global function definition for ‘RankingFC’
    geneRanker: no visible global function definition for ‘RankingWilcoxon’
    geneRanker: no visible global function definition for
     ‘RankingBaldiLong’
    geneRanker: no visible global function definition for
     ‘RankingShrinkageT’
    geneRanker: no visible global function definition for ‘RankingSam’
    geneRanker: no visible global function definition for
     ‘RankingSoftthresholdT’
    geneRanker: no visible global function definition for ‘RankingLimma’
    geneRanker: no visible global function definition for ‘toplist’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.1
Check: package dependencies
Result: ERROR
    Package required but not available: ‘rsgcc’
    
    Packages suggested but not available for checking:
     ‘GeneSelector’ ‘cairoDevice’
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'bigmemory'
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1
Check: R code for possible problems
Result: NOTE
    .DNA.connectivitylist : .fun_conn_idx: no visible global function
     definition for 'attach.big.matrix'
    .DNA.distance: no visible global function definition for
     'as.big.matrix'
    .checkadjmatrix: no visible global function definition for
     'is.big.matrix'
    .filterLowCorrelation: no visible global function definition for
     'is.big.matrix'
    .network.differences : .fun_distance: no visible global function
     definition for 'attach.big.matrix'
Flavor: r-oldrel-windows-ix86+x86_64