CRAN Package Check Results for Package mlDNA

Last updated on 2015-03-27 21:47:53.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1 5.22 53.14 58.36 NOTE
r-devel-linux-x86_64-debian-gcc 1.1 5.13 51.11 56.24 NOTE
r-devel-linux-x86_64-fedora-clang 1.1 127.56 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1 117.29 NOTE
r-devel-osx-x86_64-clang 1.1 113.46 NOTE
r-prerel-windows-ix86+x86_64 1.1 18.00 85.00 103.00 NOTE
r-prerel-linux-x86_64 1.1 5.19 52.64 57.83 NOTE
r-prerel-solaris-sparc 1.1 747.40 NOTE
r-prerel-solaris-x86 1.1 179.10 NOTE
r-release-linux-x86_64 1.1 9.30 83.55 92.85 NOTE
r-release-osx-x86_64-mavericks 1.1 ERROR
r-release-osx-x86_64-snowleopard 1.1 OK
r-release-windows-ix86+x86_64 1.1 35.00 145.00 180.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1 29.00 156.00 185.00 NOTE

Check Details

Version: 1.1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘cairoDevice’ ‘gplots’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-prerel-windows-ix86+x86_64, r-prerel-linux-x86_64, r-prerel-solaris-sparc, r-prerel-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.1
Check: R code for possible problems
Result: NOTE
    .DNA.connectivitylist : .fun_conn_idx: no visible global function
     definition for ‘attach.big.matrix’
    .DNA.distance: no visible global function definition for
     ‘as.big.matrix’
    .checkadjmatrix: no visible global function definition for
     ‘is.big.matrix’
    .filterLowCorrelation: no visible global function definition for
     ‘is.big.matrix’
    .network.differences : .fun_distance: no visible global function
     definition for ‘attach.big.matrix’
    .uniqueTissues: no visible global function definition for ‘str_sub’
    geneRanker: no visible global function definition for ‘RankingTstat’
    geneRanker: no visible global function definition for ‘RankingFC’
    geneRanker: no visible global function definition for ‘RankingWilcoxon’
    geneRanker: no visible global function definition for
     ‘RankingBaldiLong’
    geneRanker: no visible global function definition for
     ‘RankingShrinkageT’
    geneRanker: no visible global function definition for ‘RankingSam’
    geneRanker: no visible global function definition for
     ‘RankingSoftthresholdT’
    geneRanker: no visible global function definition for ‘RankingLimma’
    geneRanker: no visible global function definition for ‘toplist’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-prerel-windows-ix86+x86_64, r-prerel-linux-x86_64, r-prerel-solaris-sparc, r-prerel-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘bigmemory’
Flavors: r-prerel-solaris-sparc, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1
Check: package dependencies
Result: ERROR
    Package required but not available: ‘rsgcc’
    
    Packages suggested but not available for checking:
     ‘GeneSelector’ ‘cairoDevice’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.1
Check: R code for possible problems
Result: NOTE
    .DNA.connectivitylist : .fun_conn_idx: no visible global function
     definition for 'attach.big.matrix'
    .DNA.distance: no visible global function definition for
     'as.big.matrix'
    .checkadjmatrix: no visible global function definition for
     'is.big.matrix'
    .filterLowCorrelation: no visible global function definition for
     'is.big.matrix'
    .network.differences : .fun_distance: no visible global function
     definition for 'attach.big.matrix'
Flavor: r-oldrel-windows-ix86+x86_64