CRAN Package Check Results for Package monitoR

Last updated on 2015-04-21 06:47:31.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2 2.05 61.12 63.17 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.2 1.97 60.09 62.06 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.2 126.89 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.2 111.89 ERROR
r-devel-osx-x86_64-clang 1.0.2 91.23 ERROR
r-devel-windows-ix86+x86_64 1.0.2 8.00 185.00 193.00 NOTE
r-patched-linux-x86_64 1.0.2 2.06 110.37 112.43 NOTE
r-patched-solaris-sparc 1.0.2 1306.90 NOTE
r-patched-solaris-x86 1.0.2 255.30 NOTE
r-release-linux-x86_64 1.0.2 1.96 105.42 107.38 NOTE
r-release-osx-x86_64-mavericks 1.0.2 NOTE
r-release-osx-x86_64-snowleopard 1.0.2 ERROR
r-release-windows-ix86+x86_64 1.0.2 5.00 138.00 143.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0.2 6.00 154.00 160.00 NOTE

Check Details

Version: 1.0.2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘RODBC’ ‘fftw’ ‘parallel’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.2
Check: R code for possible problems
Result: NOTE
    binMatch : lapplyfun: no visible global function definition for
     ‘mclapply’
    binMatch : lapplyfun: no visible global function definition for
     ‘detectCores’
    bindEvents: no visible global function definition for ‘mclapply’
    bindEvents: no visible global function definition for ‘detectCores’
    corMatch : lapplyfun: no visible global function definition for
     ‘mclapply’
    corMatch : lapplyfun: no visible global function definition for
     ‘detectCores’
    dbDownloadCardRecorderID: no visible global function definition for
     ‘odbcConnect’
    dbDownloadCardRecorderID: no visible global function definition for
     ‘sqlQuery’
    dbDownloadResult: no visible global function definition for
     ‘odbcConnect’
    dbDownloadResult: no visible global function definition for ‘sqlQuery’
    dbDownloadSurvey: no visible global function definition for
     ‘odbcConnect’
    dbDownloadSurvey: no visible global function definition for ‘sqlQuery’
    dbDownloadTemplate: no visible global function definition for
     ‘odbcConnect’
    dbDownloadTemplate: no visible global function definition for
     ‘sqlQuery’
    dbSchema: no visible global function definition for ‘odbcConnect’
    dbSchema: no visible global function definition for ‘sqlQuery’
    dbSchema: no visible global function definition for ‘sqlTables’
    dbUploadAnno: no visible global function definition for ‘odbcConnect’
    dbUploadAnno: no visible global function definition for ‘sqlQuery’
    dbUploadResult: no visible global function definition for ‘odbcConnect’
    dbUploadResult: no visible global function definition for ‘sqlQuery’
    dbUploadSurvey: no visible global function definition for ‘odbcConnect’
    dbUploadSurvey: no visible binding for global variable ‘sqlQuery’
    dbUploadSurvey: no visible global function definition for ‘sqlQuery’
    dbUploadTemplate: no visible global function definition for
     ‘odbcConnect’
    dbUploadTemplate: no visible global function definition for ‘sqlQuery’
    dbUploadTemplate : <anonymous>: no visible global function definition
     for ‘sqlQuery’
    findPeaks : lapplyfun: no visible global function definition for
     ‘mclapply’
    findPeaks : lapplyfun: no visible global function definition for
     ‘detectCores’
    readBinTemplates : lapplyfun: no visible global function definition for
     ‘mclapply’
    readBinTemplates : lapplyfun: no visible global function definition for
     ‘detectCores’
    readCorTemplates : lapplyfun: no visible global function definition for
     ‘mclapply’
    readCorTemplates : lapplyfun: no visible global function definition for
     ‘detectCores’
    stft: no visible global function definition for ‘planFFT’
    stft : <anonymous>: no visible global function definition for ‘FFT’
    writeBinTemplates : lapplyfun: no visible global function definition
     for ‘mclapply’
    writeBinTemplates : lapplyfun: no visible global function definition
     for ‘detectCores’
    writeCorTemplates : lapplyfun: no visible global function definition
     for ‘mclapply’
    writeCorTemplates : lapplyfun: no visible global function definition
     for ‘detectCores’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.2
Check: examples
Result: ERROR
    Running examples in ‘monitoR-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: findPeaks
    > ### Title: Finding Score Peaks and Detections in a 'templateScores' Object
    > ### Aliases: findPeaks
    > ### Keywords: manip
    >
    > ### ** Examples
    >
    > # First create files to work with
    > data(btnw)
    > data(oven)
    > data(survey)
    > writeWave(btnw,"btnw.wav")
    > writeWave(oven,"oven.wav")
    > writeWave(survey,"survey2010-12-31_120000_EST.wav")
    >
    > # Correlation example
    > # Create two correlation templates
    > wct<-makeCorTemplate("btnw.wav",t.lim=c(1.5,2.1),frq.lim=c(4.2,5.6),name="w")
    
    Automatic point selection.
    
    Done.
    > oct<-makeCorTemplate("oven.wav",t.lim=c(1,4),frq.lim=c(1,11),dens=0.1,name="o")
    
    Automatic point selection.
    
    Done.
    >
    > # Combine all of them
    > ctemps<-combineCorTemplates(wct,oct)
    >
    > # Calculate scores
    > cscores<-corMatch("survey2010-12-31_120000_EST.wav",ctemps)
    
    Starting w . . .
     Fourier transform on survey . . .
     Continuing. . .
    
     Done.
    
    Starting o . . .
     Done.
    Error in validObject(.Object) :
     invalid class “templateScores” object: invalid object for slot "time" in class "templateScores": got class "difftime", should be or extend class "character"
    Calls: corMatch -> new -> initialize -> initialize -> validObject
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.0.2
Check: running R code from vignettes
Result: ERROR
    Errors in running code in vignettes:
    when running code in ‘monitoR_QuickStart.Rnw’
     ...
    
    Starting o1 . . .
     Done.
    
    Starting o2 . . .
     Done.
    
     When sourcing 'monitoR_QuickStart.R':
    Error: invalid class "templateScores" object: invalid object for slot "time" in class "templateScores": got class "difftime", should be or extend class "character"
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.0.2
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    tuneR >= 1.0 has changed its Wave class definition.
    Use updateWave(object) to convert Wave objects saved with previous versions of tuneR.
    
    Attaching package: 'monitoR'
    
    The following object is masked from 'package:tuneR':
    
     readMP3
    
    Quitting from lines 213-214 (monitoR_QuickStart.Rnw)
    Error: processing vignette ‘monitoR_QuickStart.Rnw’ failed with diagnostics:
    invalid class "templateScores" object: invalid object for slot "time" in class "templateScores": got class "difftime", should be or extend class "character"
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.0.2
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘fftw’ ‘RODBC’
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0.2
Check: Rd cross-references
Result: NOTE
    Packages unavailable to check Rd xrefs: ‘seewave’, ‘RODBC’
Flavor: r-release-osx-x86_64-mavericks

Version: 1.0.2
Check: package dependencies
Result: ERROR
    Package suggested but not available for checking: ‘knitr’
    
    VignetteBuilder package required for checking but installed: ‘knitr’
    
    Files named as vignettes but with no recognized vignette engine:
     ‘inst/doc/monitoR_QuickStart.Rnw’
    (Is a VignetteBuilder field missing?)
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64-snowleopard