CRAN Package Check Results for Package multcompView

Last updated on 2015-07-30 15:48:19.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1-5 0.75 18.54 19.29 NOTE
r-devel-linux-x86_64-debian-gcc 0.1-5 0.68 18.04 18.72 NOTE
r-devel-linux-x86_64-fedora-clang 0.1-5 39.07 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1-5 37.58 NOTE
r-devel-osx-x86_64-clang 0.1-5 32.01 NOTE
r-devel-windows-ix86+x86_64 0.1-5 5.00 32.00 37.00 NOTE
r-patched-linux-x86_64 0.1-5 0.69 19.00 19.69 NOTE
r-patched-solaris-sparc 0.1-5 247.50 NOTE
r-patched-solaris-x86 0.1-5 51.20 NOTE
r-release-linux-x86_64 0.1-5 0.71 18.42 19.14 NOTE
r-release-osx-x86_64-mavericks 0.1-5 ERROR
r-release-windows-ix86+x86_64 0.1-5 5.00 30.00 35.00 NOTE
r-oldrel-windows-ix86+x86_64 0.1-5 5.00 31.00 36.00 NOTE

Check Details

Version: 0.1-5
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘grid’ which was already attached by Depends.
     Please remove these calls from your code.
    Package in Depends field not imported from: ‘grid’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1-5
Check: R code for possible problems
Result: NOTE
    multcompBoxplot: no visible global function definition for ‘par’
    multcompBoxplot : TukeyHSD.: no visible global function definition for
     ‘TukeyHSD’
    multcompBoxplot : TukeyHSD.: no visible global function definition for
     ‘aov’
    multcompBoxplot : kruskalmc.: no visible global function definition for
     ‘kruskalmc’
    multcompLetters4: no visible global function definition for ‘terms’
    multcompLetters4: no visible global function definition for
     ‘model.frame’
    plot.multcompLetters: no visible global function definition for ‘par’
    plot.multcompTs: no visible global function definition for ‘par’
    plotBoxes: no visible global function definition for ‘rect’
    plotBoxes: no visible global function definition for ‘polygon’
    plotBoxes: no visible global function definition for ‘text’
    plotLetters: no visible global function definition for ‘par’
    plotLetters: no visible global function definition for ‘grid.newpage’
    plotLetters: no visible global function definition for ‘viewport’
    plotLetters: no visible global function definition for ‘pushViewport’
    plotLetters: no visible global function definition for ‘unit’
    plotLetters: no visible global function definition for ‘textGrob’
    plotLetters: no visible global function definition for ‘gpar’
    plotLetters: no visible global function definition for ‘grobHeight’
    plotLetters: no visible global function definition for ‘convertHeight’
    plotLetters: no visible global function definition for ‘grobWidth’
    plotLetters: no visible global function definition for ‘convertWidth’
    plotLetters: no visible global function definition for ‘grid.text’
    plotLetters: no visible global function definition for ‘popViewport’
    plotTs: no visible global function definition for ‘rect’
    plotTs: no visible global function definition for ‘lines’
    plotTs: no visible global function definition for ‘text’
    Undefined global functions or variables:
     TukeyHSD aov convertHeight convertWidth gpar grid.newpage grid.text
     grobHeight grobWidth kruskalmc lines model.frame par polygon
     popViewport pushViewport rect terms text textGrob unit viewport
    Consider adding
     importFrom("graphics", "lines", "par", "polygon", "rect", "text")
     importFrom("stats", "TukeyHSD", "aov", "model.frame", "terms")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.1-5
Check: R code for possible problems
Result: NOTE
    multcompBoxplot : kruskalmc.: no visible global function definition for
     ‘kruskalmc’
    plotLetters: no visible global function definition for ‘grid.newpage’
    plotLetters: no visible global function definition for ‘viewport’
    plotLetters: no visible global function definition for ‘pushViewport’
    plotLetters: no visible global function definition for ‘unit’
    plotLetters: no visible global function definition for ‘textGrob’
    plotLetters: no visible global function definition for ‘gpar’
    plotLetters: no visible global function definition for ‘grobHeight’
    plotLetters: no visible global function definition for ‘convertHeight’
    plotLetters: no visible global function definition for ‘grobWidth’
    plotLetters: no visible global function definition for ‘convertWidth’
    plotLetters: no visible global function definition for ‘grid.text’
    plotLetters: no visible global function definition for ‘popViewport’
    Undefined global functions or variables:
     convertHeight convertWidth gpar grid.newpage grid.text grobHeight
     grobWidth kruskalmc popViewport pushViewport textGrob unit viewport
Flavor: r-devel-osx-x86_64-clang

Version: 0.1-5
Check: R code for possible problems
Result: NOTE
    multcompBoxplot : kruskalmc.: no visible global function definition for
     ‘kruskalmc’
    plotLetters: no visible global function definition for ‘grid.newpage’
    plotLetters: no visible global function definition for ‘viewport’
    plotLetters: no visible global function definition for ‘pushViewport’
    plotLetters: no visible global function definition for ‘unit’
    plotLetters: no visible global function definition for ‘textGrob’
    plotLetters: no visible global function definition for ‘gpar’
    plotLetters: no visible global function definition for ‘grobHeight’
    plotLetters: no visible global function definition for ‘convertHeight’
    plotLetters: no visible global function definition for ‘grobWidth’
    plotLetters: no visible global function definition for ‘convertWidth’
    plotLetters: no visible global function definition for ‘grid.text’
    plotLetters: no visible global function definition for ‘popViewport’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1-5
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘pgirmess’
Flavor: r-release-osx-x86_64-mavericks

Version: 0.1-5
Check: examples
Result: ERROR
    Running examples in ‘multcompView-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: extract_p
    > ### Title: Extracts p-values
    > ### Aliases: extract_p extract_p.default extract_p.TukeyHSD extract_p.mc
    > ### Keywords: manip array
    >
    > ### ** Examples
    >
    > experiment <- data.frame(treatments = gl(11, 20, labels = c("dtl", "ctrl", "treat1",
    + "treat2", "treatA2", "treatB", "treatB2",
    + "treatC", "treatD", "treatA1", "treatX")),
    + y = c(rnorm(20, 10, 5), rnorm(20, 20, 5), rnorm(20, 22, 5), rnorm(20, 24, 5),
    + rnorm(20, 35, 5), rnorm(20, 37, 5), rnorm(20, 40, 5), rnorm(20, 43, 5),
    + rnorm(20, 45, 5), rnorm(20, 60, 5), rnorm(20, 60, 5)))
    > exp_tukey <- TukeyHSD(exp_aov <- aov(y ~ treatments, data = experiment))
    >
    > extract_p(exp_tukey)
    $treatments
     ctrl-dtl treat1-dtl treat2-dtl treatA2-dtl treatB-dtl
     3.441307e-07 9.229284e-12 9.603429e-14 0.000000e+00 0.000000e+00
     treatB2-dtl treatC-dtl treatD-dtl treatA1-dtl treatX-dtl
     0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00
     treat1-ctrl treat2-ctrl treatA2-ctrl treatB-ctrl treatB2-ctrl
     7.596142e-01 8.822360e-02 7.771561e-14 0.000000e+00 0.000000e+00
     treatC-ctrl treatD-ctrl treatA1-ctrl treatX-ctrl treat2-treat1
     0.000000e+00 0.000000e+00 0.000000e+00 0.000000e+00 9.796686e-01
     treatA2-treat1 treatB-treat1 treatB2-treat1 treatC-treat1 treatD-treat1
     1.589839e-13 9.370282e-14 5.428991e-14 0.000000e+00 0.000000e+00
     treatA1-treat1 treatX-treat1 treatA2-treat2 treatB-treat2 treatB2-treat2
     0.000000e+00 0.000000e+00 1.306641e-10 1.271205e-13 8.848478e-14
     treatC-treat2 treatD-treat2 treatA1-treat2 treatX-treat2 treatB-treatA2
     4.263256e-14 0.000000e+00 0.000000e+00 0.000000e+00 9.637208e-01
    treatB2-treatA2 treatC-treatA2 treatD-treatA2 treatA1-treatA2 treatX-treatA2
     4.881959e-01 1.601785e-02 7.046808e-12 0.000000e+00 0.000000e+00
     treatB2-treatB treatC-treatB treatD-treatB treatA1-treatB treatX-treatB
     9.980911e-01 4.420736e-01 1.714633e-08 0.000000e+00 0.000000e+00
     treatC-treatB2 treatD-treatB2 treatA1-treatB2 treatX-treatB2 treatD-treatC
     9.496096e-01 2.110571e-06 0.000000e+00 0.000000e+00 1.209856e-03
     treatA1-treatC treatX-treatC treatA1-treatD treatX-treatD treatX-treatA1
     0.000000e+00 0.000000e+00 7.967960e-12 9.148238e-14 9.369627e-01
    
    >
    > require(pgirmess)
    Loading required package: pgirmess
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘pgirmess’
    > extract_p(kruskalmc(y ~ treatments, data = experiment))
    Error in extract_p(kruskalmc(y ~ treatments, data = experiment)) :
     could not find function "kruskalmc"
    Execution halted
Flavor: r-release-osx-x86_64-mavericks