CRAN Package Check Results for Package mvbutils

Last updated on 2015-07-03 09:47:06.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.7.4.1 1.54 41.77 43.31 NOTE
r-devel-linux-x86_64-debian-gcc 2.7.4.1 1.50 38.84 40.34 NOTE
r-devel-linux-x86_64-fedora-clang 2.7.4.1 80.21 NOTE
r-devel-linux-x86_64-fedora-gcc 2.7.4.1 76.40 NOTE
r-devel-osx-x86_64-clang 2.7.4.1 69.12 NOTE
r-devel-windows-ix86+x86_64 2.7.4.1 8.00 81.00 89.00 NOTE
r-patched-linux-x86_64 2.7.4.1 1.57 39.76 41.33 NOTE
r-patched-solaris-sparc 2.7.4.1 490.10 NOTE
r-patched-solaris-x86 2.7.4.1 97.20 NOTE
r-release-linux-x86_64 2.7.4.1 1.67 39.04 40.71 NOTE
r-release-osx-x86_64-mavericks 2.7.4.1 NOTE
r-release-windows-ix86+x86_64 2.7.4.1 5.00 65.00 70.00 NOTE
r-oldrel-windows-ix86+x86_64 2.7.4.1 7.00 60.00 67.00 NOTE

Check Details

Version: 2.7.4.1
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Title field: should not end in a period.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 2.7.4.1
Check: dependencies in R code
Result: NOTE
    ':::' calls which should be '::':
     ‘base:::call’ ‘base:::importIntoEnv’ ‘base:::lockEnvironment’
     ‘base:::match.call’ ‘base:::print.default’ ‘base:::print.function’
     ‘tools:::Rd2txt’ ‘utils:::?’
     See the note in ?`:::` about the use of this operator.
    Unexported objects imported by ':::' calls:
     ‘tools:::.Rd_get_metadata’ ‘tools:::.get_package_metadata’
     ‘tools:::.install_package_Rd_indices’
     ‘tools:::.install_package_Rd_objects’
     ‘tools:::.install_package_description’
     ‘tools:::.install_package_namespace_info’ ‘tools:::.read_description’
     ‘tools:::.writePkgIndices’ ‘tools:::.writeVignetteHtmlIndex’
     ‘tools:::RdTags’ ‘tools:::fetchRdDB’ ‘tools:::makeLazyLoadDB’
     ‘tools:::prepare_Rd’
     See the note in ?`:::` about the use of this operator.
    There are ::: calls to the package's namespace in its code. A package
     almost never needs to use ::: for its own objects:
     ‘Save’ ‘body.print.function’ ‘cd’ ‘rbind.data.frame’
     ‘search.task.trees’ ‘untetherBalloon’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.7.4.1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.cdtree plot.foodweb
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 2.7.4.1
Check: R code for possible problems
Result: NOTE
    .onLoad : f: no visible binding for global variable ‘blah’
    .onLoad : <local>: no visible binding for global variable ‘package’
    .onLoad: no visible binding for global variable ‘tasks’
    .onLoad: no visible binding for global variable ‘ROOT’
    .onLoad: no visible binding for global variable ‘mvbutils’
    FF: no visible binding for global variable ‘w’
    FF: no visible binding for global variable ‘mods.in.packages’
    FF: no visible binding for global variable ‘mods.in.tasks’
    FF: no visible binding for global variable ‘tracees’
    FF: no visible binding for global variable ‘mtrace’
    Save.pos: no visible global function definition for ‘check.for.tracees’
    Save.pos: no visible binding for global variable ‘tracees’
    Save.pos: no visible binding for global variable ‘mtrace’
    cd: no visible binding for global variable ‘last.warning’
    cd: no visible binding for global variable ‘.Traceback’
    cd: no visible binding for global variable ‘.Saved.plots’
    cd: no visible binding for global variable ‘.’
    cd..: no visible binding for global variable ‘execute.Last’
    cd..: no visible binding for global variable ‘orig.path’
    cd.load: no visible binding for global variable ‘.’
    cd.load: no visible binding for global variable ‘execute.First’
    cd.write.mvb.tasks: no visible binding for global variable ‘.’
    cdfind: no visible binding for global variable ‘.’
    cdregexpr: no visible binding for global variable ‘.’
    cdtree: no visible binding for global variable ‘.’
    cdtree: no visible binding for global variable ‘x’
    char.unlist: no visible global function definition for ‘getSlots’
    check.pkg: no visible binding for global variable ‘subdir’
    copy.ns.objects : icns : f: no visible binding for global variable
     ‘blah’
    create.backups: no visible binding for global variable ‘.’
    cull.old.builds: no visible binding for global variable ‘subdir’
    cull.old.builds: no visible binding for global variable ‘dir.’
    demlazy: no visible binding for global variable ‘.’
    discard.mouldering.backups: no visible binding for global variable
     ‘backup.fix’
    doc2Rd: no visible binding for global variable ‘.’
    doc2Rd: no visible binding for global variable ‘docType’
    doc2Rd: no visible binding for global variable ‘title’
    doc2Rd: no visible binding for global variable ‘author’
    dont.save: no visible binding for global variable ‘.SavedPlots’
    dont.save: no visible binding for global variable ‘last.warning’
    dont.save: no visible binding for global variable ‘.Traceback’
    find.and.get: no visible binding for global variable ‘name’
    find.and.get: no visible binding for global variable ‘fixing’
    find.and.get: no visible binding for global variable ‘tracees’
    find.and.get: no visible binding for global variable ‘what’
    find.derefs: no visible binding for global variable ‘.’
    find.documented : findo: no visible binding for global variable ‘.’
    find.web: no visible binding for global variable ‘generics’
    find.web: no visible binding for global variable ‘where’
    find.web: no visible binding for global variable ‘textcolor’
    find.web: no visible binding for global variable ‘prune’
    find.web: no visible binding for global variable ‘highlight’
    fixr: no visible binding for global variable ‘load.from’
    fixr: no visible binding for global variable ‘name.load.from’
    fixr: no visible binding for global variable ‘trace.was.on’
    fixr: no visible global function definition for ‘mtrace’
    fixr: no visible binding for global variable ‘type.load.from’
    fixr: no visible binding for global variable ‘package’
    fixr: no visible binding for global variable ‘task’
    fixr.guts: no visible binding for global variable ‘tracees’
    fixr.guts: no visible global function definition for ‘mtrace’
    fixup.exports: no visible binding for global variable ‘.’
    fixup.help: no visible binding for global variable ‘spath’
    fixup.help: no visible binding for global variable ‘ipath’
    fixup.help: no visible binding for global variable ‘force.all.docs’
    fixup.help: no visible binding for global variable ‘dynamic.help’
    fixup.help: no visible binding for global variable ‘pkg’
    fixup.help: no visible binding for global variable ‘is.Rd2’
    fixup.vignettes: no visible binding for global variable ‘subdir’
    fixup.vignettes: no visible binding for global variable ‘ewhere’
    fixup.vignettes: no visible binding for global variable ‘pkg’
    fixup.vignettes: no visible binding for global variable ‘.’
    fixup.vignettes: no visible binding for global variable ‘ipath’
    foodweb: no visible global function definition for ‘par’
    foodweb: no visible binding for global variable ‘level’
    foodweb: no visible binding for global variable ‘funmat’
    foodweb: no visible binding for global variable ‘x’
    foodweb: no visible global function definition for ‘plot’
    get.new.file.numbers: no visible binding for global variable ‘.’
    help2flatdoc: no visible binding for global variable ‘.’
    help2flatdoc: no visible binding for global variable ‘USAGE’
    help2flatdoc: no visible binding for global variable ‘EXAMPLES’
    hook.set.already: no visible binding for global variable ‘prepend’
    internal.copy.ns.objects : f: no visible binding for global variable
     ‘blah’
    load.live.package: no visible binding for '<<-' assignment to
     ‘live.packages’
    load.live.package: no visible binding for global variable
     ‘live.packages’
    load.maintained.package: no visible binding for global variable
     ‘mvb.session.info’
    make.NAMESPACE: no visible binding for global variable ‘.’
    methodize.USAGE: no visible binding for global variable ‘overall.name’
    mlazy: no visible binding for global variable ‘.’
    mlocal: no visible binding for global variable ‘override.answer’
    move: no visible binding for global variable ‘.’
    move.fix.list: no visible binding for global variable ‘what’
    move.fix.list: no visible binding for global variable ‘to’
    move.to.mcache: no visible binding for global variable ‘.’
    mp.synch: no visible binding for global variable ‘exports.have.changed’
    mtidy: no visible binding for global variable ‘.’
    mupdate.mcache: no visible binding for global variable ‘.’
    mvb.rbind.data.frame: no visible binding for global variable ‘.’
    not.for.packaging: no visible binding for global variable ‘tasks’
    not.for.packaging: no visible binding for global variable ‘.Traceback’
    not.for.packaging: no visible binding for global variable
     ‘last.warning’
    not.for.packaging: no visible binding for global variable ‘.SavedPlots’
    old.onLoad.stuff: no visible binding for global variable ‘my.reps’
    organize.web.display: no visible binding for global variable ‘n’
    organize.web.display: no visible binding for global variable ‘funs’
    organize.web.display: no visible binding for global variable ‘funmat’
    organize.web.display: no visible binding for global variable ‘strwidth’
    organize.web.display: no visible global function definition for
     ‘strwidth’
    organize.web.display: no visible binding for global variable ‘minstrl’
    patch.installed: no visible binding for global variable ‘dir.’
    patch.installed: no visible binding for global variable ‘subdir’
    plot.foodweb: no visible global function definition for ‘par’
    plot.foodweb: no visible global function definition for ‘plot’
    plot.foodweb: no visible global function definition for ‘segments’
    plot.foodweb: no visible global function definition for ‘arrows’
    plot.foodweb: no visible binding for global variable ‘strwidth’
    plot.foodweb: no visible binding for global variable ‘strheight’
    plot.foodweb: no visible global function definition for ‘text’
    pre.install: no visible binding for global variable ‘subdir’
    pre.install: no visible binding for global variable ‘dir.’
    pre.install: no visible binding for global variable ‘R’
    pre.install: no visible binding for global variable ‘man’
    pre.install: no visible binding for global variable ‘inst’
    pre.install: no visible binding for global variable ‘ewhere’
    pre.install : get.nondirs: no visible binding for global variable
     ‘dir.’
    pre.install: no visible binding for global variable ‘src’
    pre.install: no visible binding for global variable ‘vignettes’
    pre.install: no visible binding for global variable ‘exec’
    pre.install: no visible binding for global variable ‘tests’
    pre.install: no visible binding for global variable ‘.’
    pre.install : <anonymous>: no visible binding for global variable
     ‘ewhere’
    pre.install: no visible binding for global variable ‘dll.paths’
    pre.install: no visible binding for global variable ‘.required’
    pre.install: no visible binding for global variable ‘.Depends’
    pre.install: no visible binding for global variable ‘tasks’
    pre.install: no visible binding for global variable ‘.Traceback’
    pre.install: no visible binding for global variable ‘last.warning’
    pre.install: no visible binding for global variable ‘.SavedPlots’
    pre.install: no visible binding for global variable ‘task.path’
    pre.install: no visible binding for global variable ‘env’
    pre.install: no visible binding for global variable ‘..’
    pre.install: no visible binding for global variable ‘exclude.funs’
    pre.install: no visible binding for global variable ‘exclude.data’
    pre.install : provisionally.add.man.file: no visible binding for global
     variable ‘subdir’
    pre.install : Rdconv.internals: no visible binding for global variable
     ‘ewhere’
    pre.install: no visible binding for global variable ‘.First.lib’
    pre.install: no visible binding for global variable ‘.Last.lib’
    pre.install: no visible binding for global variable ‘.onAttach’
    rbind.data.frame: no visible binding for global variable ‘.’
    rcmdgeneric.pkg: no visible binding for global variable ‘dir.’
    rcmdgeneric.pkg: no visible binding for global variable ‘subdir’
    rcmdgeneric.pkg: no visible binding for global variable ‘ewhere’
    save.mchanged: no visible binding for global variable ‘.’
    save.refdb: no visible binding for global variable ‘.’
    save.refdb: no visible binding for global variable ‘name’
    save.refdb: no visible binding for global variable ‘task.tree’
    set.pkg.and.dir: no visible binding for global variable
     ‘character.only’
    set.pkg.and.dir: no visible binding for global variable
     ‘dir.above.source’
    set.rcmd.vars: no visible binding for global variable ‘sep’
    setup.dontruns: no visible binding for global variable ‘.’
    setup.mcache: no visible binding for global variable ‘.’
    spkg: no visible binding for global variable ‘subdir’
    subco: no visible binding for global variable ‘Rd.version’
    unpackage: no visible binding for global variable ‘.’
    unpackage: no visible binding for global variable ‘CONTENTS’
    unpackage: no visible binding for global variable ‘INDEX’
    unpackage: no visible binding for global variable ‘MD5’
    unpackage: no visible binding for global variable ‘NAMESPACE’
    unpackage: no visible binding for global variable ‘..’
    unpackage: no visible binding for global variable ‘src’
    unpackage: no visible binding for global variable ‘chtml’
    unpackage: no visible binding for global variable ‘html’
    unpackage: no visible binding for global variable ‘latex’
    unpackage: no visible binding for global variable ‘meta’
    unpackage: no visible binding for global variable ‘R’
    unpackage: no visible binding for global variable ‘libs’
    update.loaded.pkg: no visible binding for global variable ‘doc’
    update.loaded.pkg: no visible binding for global variable ‘export.me’
    write.sourceable.function: no visible binding for global variable
     ‘bug.position’
    Undefined global functions or variables:
     . .. .Depends .First.lib .Last.lib .Saved.plots .SavedPlots
     .Traceback .onAttach .required CONTENTS EXAMPLES INDEX MD5 NAMESPACE
     R ROOT Rd.version USAGE arrows author backup.fix blah bug.position
     character.only check.for.tracees chtml dir. dir.above.source
     dll.paths doc docType dynamic.help env ewhere exclude.data
     exclude.funs exec execute.First execute.Last export.me
     exports.have.changed fixing force.all.docs funmat funs generics
     getSlots highlight html inst ipath is.Rd2 last.warning latex level
     libs live.packages load.from man meta minstrl mods.in.packages
     mods.in.tasks mtrace mvb.session.info mvbutils my.reps n name
     name.load.from orig.path overall.name override.answer package par pkg
     plot prepend prune segments sep spath src strheight strwidth subdir
     task task.path task.tree tasks tests text textcolor title to
     trace.was.on tracees type.load.from vignettes w what where x
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 2.7.4.1
Check: Rd line widths
Result: NOTE
    Rd file 'doc2Rd.Rd':
     \usage lines wider than 90 characters:
     doc2Rd( text, file=NULL, append=, warnings.on=TRUE, Rd.version=, def.valids=NULL, check.legality=TRUE)
     \examples lines wider than 100 characters:
     sample.fun <- source.mvb( system.file( file.path( 'demostuff', 'sample.fun.rrr'), package='mvbutils'))
    
    Rd file 'fast.read.fwf.Rd':
     \usage lines wider than 90 characters:
     fast.read.fwf(file, width, col.names = if (!is.null(colClasses)) names(colClasses) else "V" %&% 1:ncol(fields), colClasses = character ... [TRUNCATED]
    
    Rd file 'fixr.Rd':
     \usage lines wider than 90 characters:
     fixr( x, new=FALSE, install=FALSE, what, fixing, pkg=NULL, character.only=FALSE, new.doc=FALSE)
     FF() # manual check and update, usually only needed temporarily if autoedit() stops working
    
    Rd file 'foodweb.Rd':
     \usage lines wider than 90 characters:
     foodweb( funs, where=1, charlim=80, prune=character(0), rprune, ancestors=TRUE, descendents=TRUE, plotting =TRUE, plotmath=FALSE, gener ... [TRUNCATED]
     plot(x, textcolor, boxcolor, xblank, border, textargs = list(), use.centres = TRUE, color.lines = TRUE, poly.args = list(), expand.xbox ... [TRUNCATED]
    
    Rd file 'install.pkg.Rd':
     \usage lines wider than 90 characters:
     install.pkg( pkg, character.only=FALSE, dir.above.source='+', lib=.libPaths()[1], flags=character(0), intern=TRUE)
     build.pkg( pkg, character.only=FALSE, dir.above.source='+', flags=character(0), intern=TRUE)
     build.pkg.binary( pkg, character.only=FALSE, dir.above.source='+', flags=character(0), intern=TRUE)
     check.pkg( pkg, character.only=FALSE, dir.above.source='+', build.flags=character(0), check.flags=character( 0),
     set.rcmd.vars( ...) # not yet implemented. If you need to set env vars eg PATH for R CMD to work, you have to do so yourself; see *De ... [TRUNCATED]
    
    Rd file 'local.on.exit.Rd':
     \usage lines wider than 90 characters:
     # Inside an 'mlocal' function of the form function( <<args>>, nlocal=sys.parent(), <<temp.params>>) mlocal({ <<code>> })
    
    Rd file 'maintain.packages.Rd':
     \usage lines wider than 90 characters:
     # E.g. in your .First, after library( mvbutils), or in a '.First.task' above yr task-package
    
    Rd file 'move.Rd':
     \usage lines wider than 90 characters:
     # Use 'what' arg to move several objects at once, e.g. move( what=c( "thing1", "thing2"), <<etc>>)
    
    Rd file 'multirep.Rd':
     \examples lines wider than 100 characters:
     multirep( cq( the, cat, sat, on, the, mat), c( 2, 6), list( cq( big, bug), cq( elephant, howdah, cushion)))
    
    Rd file 'mvbutils.operators.Rd':
     \examples lines wider than 100 characters:
     c( "cat", "hat", "dog", "brick") %that.match% c( "at", "ic") # cat hat brick; synonym for '%matching%'
     c( "cat", "hat", "dog", "brick") %that.dont.match% c( "at", "ic") # dog; like '%except%' but for regexps
    
    Rd file 'pre.install.Rd':
     \usage lines wider than 90 characters:
     patch.installed( pkg, character.only=FALSE, force.all.docs=FALSE, help.patch=TRUE, DLLs.only=FALSE,
    
    Rd file 'print.Rd':
     \examples lines wider than 100 characters:
     # Special methods shown below; basic behaviour of 'print', 'print.default', and 'print.function' is as for base-R
    
    Rd file 'rbdf.Rd':
     \usage lines wider than 90 characters:
     rbdf(..., deparse.level = 1) # explicitly call S3 method for data frames (circumvent rbind dispatch)
     \examples lines wider than 100 characters:
     #evalq( rbind( data.frame( x=1, y=2, z=3), c( x=4, y=5)), baseenv()) # NB gained element! Try predicting z[2]...
    
    Rd file 'source.mvb.Rd':
     \usage lines wider than 90 characters:
     # Use "from.here" only inside "read.table", like so: read.table( file=from.here( EOF=), ...)
    
    Rd file 'write.sourceable.function.Rd':
     \usage lines wider than 90 characters:
     write.sourceable.function( x, con, append=FALSE, print.name=FALSE, doc.special=TRUE, xn=NULL)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 2.7.4.1
Check: R code for possible problems
Result: NOTE
    .onLoad : f: no visible binding for global variable ‘blah’
    .onLoad : <local>: no visible binding for global variable ‘package’
    .onLoad: no visible binding for global variable ‘tasks’
    .onLoad: no visible binding for global variable ‘ROOT’
    .onLoad: no visible binding for global variable ‘mvbutils’
    FF: no visible binding for global variable ‘w’
    FF: no visible binding for global variable ‘mods.in.packages’
    FF: no visible binding for global variable ‘mods.in.tasks’
    FF: no visible binding for global variable ‘tracees’
    FF: no visible binding for global variable ‘mtrace’
    Save.pos: no visible global function definition for ‘check.for.tracees’
    Save.pos: no visible binding for global variable ‘tracees’
    Save.pos: no visible binding for global variable ‘mtrace’
    cd: no visible binding for global variable ‘last.warning’
    cd: no visible binding for global variable ‘.Traceback’
    cd: no visible binding for global variable ‘.Saved.plots’
    cd: no visible binding for global variable ‘.’
    cd..: no visible binding for global variable ‘execute.Last’
    cd..: no visible binding for global variable ‘orig.path’
    cd.load: no visible binding for global variable ‘.’
    cd.load: no visible binding for global variable ‘execute.First’
    cd.write.mvb.tasks: no visible binding for global variable ‘.’
    cdfind: no visible binding for global variable ‘.’
    cdregexpr: no visible binding for global variable ‘.’
    cdtree: no visible binding for global variable ‘.’
    cdtree: no visible binding for global variable ‘x’
    check.pkg: no visible binding for global variable ‘subdir’
    copy.ns.objects : icns : f: no visible binding for global variable
     ‘blah’
    create.backups: no visible binding for global variable ‘.’
    cull.old.builds: no visible binding for global variable ‘subdir’
    cull.old.builds: no visible binding for global variable ‘dir.’
    demlazy: no visible binding for global variable ‘.’
    discard.mouldering.backups: no visible binding for global variable
     ‘backup.fix’
    doc2Rd: no visible binding for global variable ‘.’
    doc2Rd: no visible binding for global variable ‘docType’
    doc2Rd: no visible binding for global variable ‘author’
    dont.save: no visible binding for global variable ‘.SavedPlots’
    dont.save: no visible binding for global variable ‘last.warning’
    dont.save: no visible binding for global variable ‘.Traceback’
    find.and.get: no visible binding for global variable ‘name’
    find.and.get: no visible binding for global variable ‘fixing’
    find.and.get: no visible binding for global variable ‘tracees’
    find.and.get: no visible binding for global variable ‘what’
    find.derefs: no visible binding for global variable ‘.’
    find.documented : findo: no visible binding for global variable ‘.’
    find.web: no visible binding for global variable ‘generics’
    find.web: no visible binding for global variable ‘where’
    find.web: no visible binding for global variable ‘textcolor’
    find.web: no visible binding for global variable ‘prune’
    find.web: no visible binding for global variable ‘highlight’
    fixr: no visible binding for global variable ‘load.from’
    fixr: no visible binding for global variable ‘name.load.from’
    fixr: no visible binding for global variable ‘trace.was.on’
    fixr: no visible global function definition for ‘mtrace’
    fixr: no visible binding for global variable ‘type.load.from’
    fixr: no visible binding for global variable ‘package’
    fixr: no visible binding for global variable ‘task’
    fixr.guts: no visible binding for global variable ‘tracees’
    fixr.guts: no visible global function definition for ‘mtrace’
    fixup.exports: no visible binding for global variable ‘.’
    fixup.help: no visible binding for global variable ‘spath’
    fixup.help: no visible binding for global variable ‘ipath’
    fixup.help: no visible binding for global variable ‘force.all.docs’
    fixup.help: no visible binding for global variable ‘dynamic.help’
    fixup.help: no visible binding for global variable ‘pkg’
    fixup.help: no visible binding for global variable ‘is.Rd2’
    fixup.vignettes: no visible binding for global variable ‘subdir’
    fixup.vignettes: no visible binding for global variable ‘ewhere’
    fixup.vignettes: no visible binding for global variable ‘pkg’
    fixup.vignettes: no visible binding for global variable ‘.’
    fixup.vignettes: no visible binding for global variable ‘ipath’
    foodweb: no visible binding for global variable ‘level’
    foodweb: no visible binding for global variable ‘funmat’
    foodweb: no visible binding for global variable ‘x’
    get.new.file.numbers: no visible binding for global variable ‘.’
    help2flatdoc: no visible binding for global variable ‘.’
    help2flatdoc: no visible binding for global variable ‘USAGE’
    help2flatdoc: no visible binding for global variable ‘EXAMPLES’
    hook.set.already: no visible binding for global variable ‘prepend’
    internal.copy.ns.objects : f: no visible binding for global variable
     ‘blah’
    load.live.package: no visible binding for '<<-' assignment to
     ‘live.packages’
    load.live.package: no visible binding for global variable
     ‘live.packages’
    load.maintained.package: no visible binding for global variable
     ‘mvb.session.info’
    make.NAMESPACE: no visible binding for global variable ‘.’
    methodize.USAGE: no visible binding for global variable ‘overall.name’
    mlazy: no visible binding for global variable ‘.’
    mlocal: no visible binding for global variable ‘override.answer’
    move: no visible binding for global variable ‘.’
    move.fix.list: no visible binding for global variable ‘what’
    move.fix.list: no visible binding for global variable ‘to’
    move.to.mcache: no visible binding for global variable ‘.’
    mp.synch: no visible binding for global variable ‘exports.have.changed’
    mtidy: no visible binding for global variable ‘.’
    mupdate.mcache: no visible binding for global variable ‘.’
    mvb.rbind.data.frame: no visible binding for global variable ‘.’
    not.for.packaging: no visible binding for global variable ‘tasks’
    not.for.packaging: no visible binding for global variable ‘.Traceback’
    not.for.packaging: no visible binding for global variable
     ‘last.warning’
    not.for.packaging: no visible binding for global variable ‘.SavedPlots’
    old.onLoad.stuff: no visible binding for global variable ‘my.reps’
    organize.web.display: no visible binding for global variable ‘n’
    organize.web.display: no visible binding for global variable ‘funs’
    organize.web.display: no visible binding for global variable ‘funmat’
    organize.web.display: no visible binding for global variable ‘minstrl’
    patch.installed: no visible binding for global variable ‘dir.’
    patch.installed: no visible binding for global variable ‘subdir’
    pre.install: no visible binding for global variable ‘subdir’
    pre.install: no visible binding for global variable ‘dir.’
    pre.install: no visible binding for global variable ‘R’
    pre.install: no visible binding for global variable ‘man’
    pre.install: no visible binding for global variable ‘inst’
    pre.install: no visible binding for global variable ‘ewhere’
    pre.install : get.nondirs: no visible binding for global variable
     ‘dir.’
    pre.install: no visible binding for global variable ‘src’
    pre.install: no visible binding for global variable ‘vignettes’
    pre.install: no visible binding for global variable ‘exec’
    pre.install: no visible binding for global variable ‘tests’
    pre.install: no visible binding for global variable ‘.’
    pre.install : <anonymous>: no visible binding for global variable
     ‘ewhere’
    pre.install: no visible binding for global variable ‘dll.paths’
    pre.install: no visible binding for global variable ‘.required’
    pre.install: no visible binding for global variable ‘.Depends’
    pre.install: no visible binding for global variable ‘tasks’
    pre.install: no visible binding for global variable ‘.Traceback’
    pre.install: no visible binding for global variable ‘last.warning’
    pre.install: no visible binding for global variable ‘.SavedPlots’
    pre.install: no visible binding for global variable ‘task.path’
    pre.install: no visible binding for global variable ‘env’
    pre.install: no visible binding for global variable ‘..’
    pre.install: no visible binding for global variable ‘exclude.funs’
    pre.install: no visible binding for global variable ‘exclude.data’
    pre.install : provisionally.add.man.file: no visible binding for global
     variable ‘subdir’
    pre.install : Rdconv.internals: no visible binding for global variable
     ‘ewhere’
    pre.install: no visible binding for global variable ‘.First.lib’
    pre.install: no visible binding for global variable ‘.Last.lib’
    pre.install: no visible binding for global variable ‘.onAttach’
    rbind.data.frame: no visible binding for global variable ‘.’
    rcmdgeneric.pkg: no visible binding for global variable ‘dir.’
    rcmdgeneric.pkg: no visible binding for global variable ‘subdir’
    rcmdgeneric.pkg: no visible binding for global variable ‘ewhere’
    save.mchanged: no visible binding for global variable ‘.’
    save.refdb: no visible binding for global variable ‘.’
    save.refdb: no visible binding for global variable ‘name’
    save.refdb: no visible binding for global variable ‘task.tree’
    set.pkg.and.dir: no visible binding for global variable
     ‘character.only’
    set.pkg.and.dir: no visible binding for global variable
     ‘dir.above.source’
    set.rcmd.vars: no visible binding for global variable ‘sep’
    setup.dontruns: no visible binding for global variable ‘.’
    setup.mcache: no visible binding for global variable ‘.’
    spkg: no visible binding for global variable ‘subdir’
    subco: no visible binding for global variable ‘Rd.version’
    unpackage: no visible binding for global variable ‘.’
    unpackage: no visible binding for global variable ‘CONTENTS’
    unpackage: no visible binding for global variable ‘INDEX’
    unpackage: no visible binding for global variable ‘MD5’
    unpackage: no visible binding for global variable ‘NAMESPACE’
    unpackage: no visible binding for global variable ‘..’
    unpackage: no visible binding for global variable ‘src’
    unpackage: no visible binding for global variable ‘chtml’
    unpackage: no visible binding for global variable ‘html’
    unpackage: no visible binding for global variable ‘latex’
    unpackage: no visible binding for global variable ‘meta’
    unpackage: no visible binding for global variable ‘R’
    unpackage: no visible binding for global variable ‘libs’
    update.loaded.pkg: no visible binding for global variable ‘doc’
    update.loaded.pkg: no visible binding for global variable ‘export.me’
    write.sourceable.function: no visible binding for global variable
     ‘bug.position’
    Undefined global functions or variables:
     . .. .Depends .First.lib .Last.lib .Saved.plots .SavedPlots
     .Traceback .onAttach .required CONTENTS EXAMPLES INDEX MD5 NAMESPACE
     R ROOT Rd.version USAGE author backup.fix blah bug.position
     character.only check.for.tracees chtml dir. dir.above.source
     dll.paths doc docType dynamic.help env ewhere exclude.data
     exclude.funs exec execute.First execute.Last export.me
     exports.have.changed fixing force.all.docs funmat funs generics
     highlight html inst ipath is.Rd2 last.warning latex level libs
     live.packages load.from man meta minstrl mods.in.packages
     mods.in.tasks mtrace mvb.session.info mvbutils my.reps n name
     name.load.from orig.path overall.name override.answer package pkg
     prepend prune sep spath src subdir task task.path task.tree tasks
     tests textcolor to trace.was.on tracees type.load.from vignettes w
     what where x
Flavor: r-devel-osx-x86_64-clang

Version: 2.7.4.1
Check: R code for possible problems
Result: NOTE
    .onLoad : f: no visible binding for global variable 'blah'
    .onLoad : <local>: no visible binding for global variable 'package'
    .onLoad: no visible binding for global variable 'tasks'
    .onLoad: no visible binding for global variable 'ROOT'
    .onLoad: no visible binding for global variable 'mvbutils'
    FF: no visible binding for global variable 'w'
    FF: no visible binding for global variable 'mods.in.packages'
    FF: no visible binding for global variable 'mods.in.tasks'
    FF: no visible binding for global variable 'tracees'
    FF: no visible binding for global variable 'mtrace'
    Save.pos: no visible global function definition for 'check.for.tracees'
    Save.pos: no visible binding for global variable 'tracees'
    Save.pos: no visible binding for global variable 'mtrace'
    cd: no visible binding for global variable 'last.warning'
    cd: no visible binding for global variable '.Traceback'
    cd: no visible binding for global variable '.Saved.plots'
    cd: no visible binding for global variable '.'
    cd..: no visible binding for global variable 'execute.Last'
    cd..: no visible binding for global variable 'orig.path'
    cd.load: no visible binding for global variable '.'
    cd.load: no visible binding for global variable 'execute.First'
    cd.write.mvb.tasks: no visible binding for global variable '.'
    cdfind: no visible binding for global variable '.'
    cdregexpr: no visible binding for global variable '.'
    cdtree: no visible binding for global variable '.'
    cdtree: no visible binding for global variable 'x'
    check.pkg: no visible binding for global variable 'subdir'
    copy.ns.objects : icns : f: no visible binding for global variable
     'blah'
    create.backups: no visible binding for global variable '.'
    cull.old.builds: no visible binding for global variable 'subdir'
    cull.old.builds: no visible binding for global variable 'dir.'
    demlazy: no visible binding for global variable '.'
    discard.mouldering.backups: no visible binding for global variable
     'backup.fix'
    doc2Rd: no visible binding for global variable '.'
    doc2Rd: no visible binding for global variable 'docType'
    doc2Rd: no visible binding for global variable 'author'
    dont.save: no visible binding for global variable '.SavedPlots'
    dont.save: no visible binding for global variable 'last.warning'
    dont.save: no visible binding for global variable '.Traceback'
    find.and.get: no visible binding for global variable 'name'
    find.and.get: no visible binding for global variable 'fixing'
    find.and.get: no visible binding for global variable 'tracees'
    find.and.get: no visible binding for global variable 'what'
    find.derefs: no visible binding for global variable '.'
    find.documented : findo: no visible binding for global variable '.'
    find.web: no visible binding for global variable 'generics'
    find.web: no visible binding for global variable 'where'
    find.web: no visible binding for global variable 'textcolor'
    find.web: no visible binding for global variable 'prune'
    find.web: no visible binding for global variable 'highlight'
    fixr: no visible binding for global variable 'load.from'
    fixr: no visible binding for global variable 'name.load.from'
    fixr: no visible binding for global variable 'trace.was.on'
    fixr: no visible global function definition for 'mtrace'
    fixr: no visible binding for global variable 'type.load.from'
    fixr: no visible binding for global variable 'package'
    fixr: no visible binding for global variable 'task'
    fixr.guts: no visible binding for global variable 'tracees'
    fixr.guts: no visible global function definition for 'mtrace'
    fixup.exports: no visible binding for global variable '.'
    fixup.help: no visible binding for global variable 'spath'
    fixup.help: no visible binding for global variable 'ipath'
    fixup.help: no visible binding for global variable 'force.all.docs'
    fixup.help: no visible binding for global variable 'dynamic.help'
    fixup.help: no visible binding for global variable 'pkg'
    fixup.help: no visible binding for global variable 'is.Rd2'
    fixup.vignettes: no visible binding for global variable 'subdir'
    fixup.vignettes: no visible binding for global variable 'ewhere'
    fixup.vignettes: no visible binding for global variable 'pkg'
    fixup.vignettes: no visible binding for global variable '.'
    fixup.vignettes: no visible binding for global variable 'ipath'
    foodweb: no visible binding for global variable 'level'
    foodweb: no visible binding for global variable 'funmat'
    foodweb: no visible binding for global variable 'x'
    get.new.file.numbers: no visible binding for global variable '.'
    help2flatdoc: no visible binding for global variable '.'
    help2flatdoc: no visible binding for global variable 'USAGE'
    help2flatdoc: no visible binding for global variable 'EXAMPLES'
    hook.set.already: no visible binding for global variable 'prepend'
    internal.copy.ns.objects : f: no visible binding for global variable
     'blah'
    load.live.package: no visible binding for '<<-' assignment to
     'live.packages'
    load.live.package: no visible binding for global variable
     'live.packages'
    load.maintained.package: no visible binding for global variable
     'mvb.session.info'
    make.NAMESPACE: no visible binding for global variable '.'
    methodize.USAGE: no visible binding for global variable 'overall.name'
    mlazy: no visible binding for global variable '.'
    mlocal: no visible binding for global variable 'override.answer'
    move: no visible binding for global variable '.'
    move.fix.list: no visible binding for global variable 'what'
    move.fix.list: no visible binding for global variable 'to'
    move.to.mcache: no visible binding for global variable '.'
    mp.synch: no visible binding for global variable 'exports.have.changed'
    mtidy: no visible binding for global variable '.'
    mupdate.mcache: no visible binding for global variable '.'
    mvb.rbind.data.frame: no visible binding for global variable '.'
    not.for.packaging: no visible binding for global variable 'tasks'
    not.for.packaging: no visible binding for global variable '.Traceback'
    not.for.packaging: no visible binding for global variable
     'last.warning'
    not.for.packaging: no visible binding for global variable '.SavedPlots'
    old.onLoad.stuff: no visible binding for global variable 'my.reps'
    organize.web.display: no visible binding for global variable 'n'
    organize.web.display: no visible binding for global variable 'funs'
    organize.web.display: no visible binding for global variable 'funmat'
    organize.web.display: no visible binding for global variable 'minstrl'
    patch.installed: no visible binding for global variable 'dir.'
    patch.installed: no visible binding for global variable 'subdir'
    pre.install: no visible binding for global variable 'subdir'
    pre.install: no visible binding for global variable 'dir.'
    pre.install: no visible binding for global variable 'R'
    pre.install: no visible binding for global variable 'man'
    pre.install: no visible binding for global variable 'inst'
    pre.install: no visible binding for global variable 'ewhere'
    pre.install : get.nondirs: no visible binding for global variable
     'dir.'
    pre.install: no visible binding for global variable 'src'
    pre.install: no visible binding for global variable 'vignettes'
    pre.install: no visible binding for global variable 'exec'
    pre.install: no visible binding for global variable 'tests'
    pre.install: no visible binding for global variable '.'
    pre.install : <anonymous>: no visible binding for global variable
     'ewhere'
    pre.install: no visible binding for global variable 'dll.paths'
    pre.install: no visible binding for global variable '.required'
    pre.install: no visible binding for global variable '.Depends'
    pre.install: no visible binding for global variable 'tasks'
    pre.install: no visible binding for global variable '.Traceback'
    pre.install: no visible binding for global variable 'last.warning'
    pre.install: no visible binding for global variable '.SavedPlots'
    pre.install: no visible binding for global variable 'task.path'
    pre.install: no visible binding for global variable 'env'
    pre.install: no visible binding for global variable '..'
    pre.install: no visible binding for global variable 'exclude.funs'
    pre.install: no visible binding for global variable 'exclude.data'
    pre.install : provisionally.add.man.file: no visible binding for global
     variable 'subdir'
    pre.install : Rdconv.internals: no visible binding for global variable
     'ewhere'
    pre.install: no visible binding for global variable '.First.lib'
    pre.install: no visible binding for global variable '.Last.lib'
    pre.install: no visible binding for global variable '.onAttach'
    rbind.data.frame: no visible binding for global variable '.'
    rcmdgeneric.pkg: no visible binding for global variable 'dir.'
    rcmdgeneric.pkg: no visible binding for global variable 'subdir'
    rcmdgeneric.pkg: no visible binding for global variable 'ewhere'
    save.mchanged: no visible binding for global variable '.'
    save.refdb: no visible binding for global variable '.'
    save.refdb: no visible binding for global variable 'name'
    save.refdb: no visible binding for global variable 'task.tree'
    set.pkg.and.dir: no visible binding for global variable
     'character.only'
    set.pkg.and.dir: no visible binding for global variable
     'dir.above.source'
    set.rcmd.vars: no visible binding for global variable 'sep'
    setup.dontruns: no visible binding for global variable '.'
    setup.mcache: no visible binding for global variable '.'
    spkg: no visible binding for global variable 'subdir'
    subco: no visible binding for global variable 'Rd.version'
    unpackage: no visible binding for global variable '.'
    unpackage: no visible binding for global variable 'CONTENTS'
    unpackage: no visible binding for global variable 'INDEX'
    unpackage: no visible binding for global variable 'MD5'
    unpackage: no visible binding for global variable 'NAMESPACE'
    unpackage: no visible binding for global variable '..'
    unpackage: no visible binding for global variable 'src'
    unpackage: no visible binding for global variable 'chtml'
    unpackage: no visible binding for global variable 'html'
    unpackage: no visible binding for global variable 'latex'
    unpackage: no visible binding for global variable 'meta'
    unpackage: no visible binding for global variable 'R'
    unpackage: no visible binding for global variable 'libs'
    update.loaded.pkg: no visible binding for global variable 'doc'
    update.loaded.pkg: no visible binding for global variable 'export.me'
    write.sourceable.function: no visible binding for global variable
     'bug.position'
Flavors: r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64