CRAN Package Check Results for Package nCal

Last updated on 2015-08-28 12:48:01.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2015.3-3 5.30 81.16 86.46 NOTE
r-devel-linux-x86_64-debian-gcc 2015.3-3 5.30 79.78 85.08 NOTE
r-devel-linux-x86_64-fedora-clang 2015.3-3 183.27 NOTE
r-devel-linux-x86_64-fedora-gcc 2015.3-3 179.14 NOTE
r-devel-osx-x86_64-clang 2015.3-3 143.71 NOTE
r-devel-windows-ix86+x86_64 2015.3-3 22.00 128.00 150.00 NOTE
r-patched-linux-x86_64 2015.3-3 5.43 84.92 90.35 NOTE
r-patched-solaris-sparc 2015.3-3 1059.90 NOTE
r-patched-solaris-x86 2015.3-3 259.60 NOTE
r-release-linux-x86_64 2015.3-3 5.31 83.61 88.92 NOTE
r-release-osx-x86_64-mavericks 2015.3-3 NOTE
r-release-windows-ix86+x86_64 2015.3-3 22.00 196.00 218.00 NOTE
r-oldrel-windows-ix86+x86_64 2015.3-3 34.00 198.00 232.00 OK

Check Details

Version: 2015.3-3
Check: R code for possible problems
Result: NOTE
    bcrm: no visible binding for global variable ‘coef’
    bcrm: no visible binding for global variable ‘var’
    bcrm: no visible binding for global variable ‘median’
    bcrm : <anonymous>: no visible global function definition for ‘density’
    bcrm: no visible binding for global variable ‘sd’
    bcrm : <anonymous>: no visible global function definition for
     ‘quantile’
    bcrm : <anonymous>: no visible global function definition for ‘median’
    bcrm : <anonymous>: no visible global function definition for ‘var’
    crm.fit: no visible global function definition for ‘coef’
    deviance.crm: no visible global function definition for ‘fitted’
    drm.fit: no visible global function definition for ‘vcov’
    find.be2: no visible global function definition for ‘lm’
    find.be2: no visible global function definition for ‘coef’
    get.S1: no visible global function definition for ‘integrate’
    get.S2: no visible global function definition for ‘integrate’
    get.abc: no visible global function definition for ‘integrate’
    get.abs.dev: no visible global function definition for ‘integrate’
    get.density.boundary.corrected: no visible global function definition
     for ‘density’
    getConc: no visible global function definition for ‘coef’
    getConc: no visible global function definition for ‘vcov’
    getConc: no visible binding for global variable ‘median’
    getConc: no visible binding for global variable ‘var’
    getConc: no visible binding for global variable ‘quantile’
    getMeanSd: no visible global function definition for ‘splinefun’
    glspl: no visible global function definition for ‘model.frame’
    glspl: no visible global function definition for ‘coef’
    glspl: no visible global function definition for ‘fitted’
    glspl: no visible global function definition for ‘uniroot’
    gnls.fit: no visible global function definition for ‘coef’
    gnls.fit: no visible binding for global variable ‘na.omit’
    gnls.fit: no visible global function definition for ‘vcov’
    lines.crm: no visible global function definition for ‘coef’
    mle.dr: no visible global function definition for ‘model.frame’
    mle.dr: no visible global function definition for ‘optim’
    mle.dr: no visible global function definition for ‘uniroot’
    ncal.character: no visible global function definition for ‘read.csv’
    ncal.formula: no visible global function definition for ‘aggregate’
    ncal.formula: no visible global function definition for ‘par’
    ncal.formula: no visible global function definition for ‘qt’
    ncal.formula: no visible global function definition for ‘coef’
    ncal.formula: no visible global function definition for ‘median’
    ncal.formula: no visible global function definition for ‘points’
    ncal.formula: no visible global function definition for ‘abline’
    ncal.formula: no visible global function definition for ‘lines’
    ncalGUI : call.getConc.fun: no visible global function definition for
     ‘capture.output’
    ncalGUI : update.status.fun: no visible global function definition for
     ‘as.formula’
    ncalGUI : update.status.fun: no visible global function definition for
     ‘write.csv’
    ncalGUI : update.status.fun: no visible global function definition for
     ‘dev.off’
    ncalGUI.2 : process.fun: no visible global function definition for
     ‘as.formula’
    ncalGUI.2 : process.fun: no visible global function definition for
     ‘write.csv’
    ncalGUI.2 : process.fun: no visible global function definition for
     ‘dev.off’
    plot.bcrm: no visible global function definition for ‘plot’
    plot.bcrm: no visible global function definition for ‘lines’
    plot.marginals: no visible global function definition for ‘plot’
    plot.marginals: no visible global function definition for ‘lines’
    plot.marginals: no visible global function definition for ‘legend’
    plot.marginals: no visible global function definition for ‘title’
    plot.marginals: no visible global function definition for ‘dev.off’
    plot5PL: no visible global function definition for ‘plot’
    plot5PL: no visible global function definition for ‘lines’
    predict.bcrm: no visible global function definition for ‘median’
    read.luminex.fixed.sheet.xls: no visible global function definition for
     ‘read.csv’
    read.luminex.sheet.xls: no visible global function definition for
     ‘read.csv’
    read.luminex.xls: no visible global function definition for ‘runif’
    simulate1curve: no visible global function definition for ‘rnorm’
    ss.fct.via.LL4: no visible global function definition for ‘coef’
    vcov.bcrm: no visible global function definition for ‘cov’
    Undefined global functions or variables:
     abline aggregate as.formula capture.output coef cov density dev.off
     fitted integrate legend lines lm median model.frame na.omit optim par
     plot points qt quantile read.csv rnorm runif sd splinefun title
     uniroot var vcov write.csv
    Consider adding
     importFrom("grDevices", "dev.off")
     importFrom("graphics", "abline", "legend", "lines", "par", "plot",
     "points", "title")
     importFrom("stats", "aggregate", "as.formula", "coef", "cov",
     "density", "fitted", "integrate", "lm", "median",
     "model.frame", "na.omit", "optim", "qt", "quantile",
     "rnorm", "runif", "sd", "splinefun", "uniroot", "var",
     "vcov")
     importFrom("utils", "capture.output", "read.csv", "write.csv")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 2015.3-3
Check: files in ‘vignettes’
Result: NOTE
    The following directory looks like a leftover from 'knitr':
     ‘figure’
    Please remove from your package.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64