CRAN Package Check Results for Package nat

Last updated on 2016-05-25 23:47:57.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 1.8.1 3.14 68.25 71.40 ERROR
r-devel-linux-x86_64-fedora-clang 1.8.1 124.05 ERROR
r-devel-linux-x86_64-fedora-gcc 1.8.1 118.60 ERROR
r-devel-osx-x86_64-clang 1.8.1 151.49 ERROR
r-devel-windows-ix86+x86_64 1.8.1 9.00 121.00 130.00 ERROR
r-patched-linux-x86_64 1.8.1 3.29 65.90 69.19 ERROR
r-patched-solaris-sparc 1.8.1 689.40 ERROR
r-patched-solaris-x86 1.8.1 160.00 ERROR
r-release-linux-x86_64 1.8.1 3.31 67.26 70.57 ERROR
r-release-osx-x86_64-mavericks 1.8.1 ERROR
r-release-windows-ix86+x86_64 1.8.1 16.00 101.00 117.00 ERROR
r-oldrel-windows-ix86+x86_64 1.8.1 11.00 115.00 126.00 ERROR

Check Details

Version: 1.8.1
Check: tests
Result: ERROR
    Running the tests in ‘tests/test-all.R’ failed.
    Last 13 lines of output:
     adding: DA1/EBH20R.swc (deflated 54%)
     adding: DA1/EBI12L.swc (deflated 54%)
     adding: DL3/EBH20L.swc (deflated 54%)
     adding: DL3/EBI22R.swc (deflated 53%)
     1. Failure: write.nrrd.header.for.file (@test-nrrd-io.R#132) -------------------
     error$message does not match "read.im3d".
     Actual value: "Unable to read data saved in format: am"
    
    
     testthat results ================================================================
     OK: 726 SKIPPED: 0 FAILED: 1
     1. Failure: write.nrrd.header.for.file (@test-nrrd-io.R#132)
    
     Error: testthat unit tests failed
     Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.8.1
Check: tests
Result: ERROR
    Running the tests in ‘tests/test-all.R’ failed.
    Last 13 lines of output:
     adding: DL3/EBH20L.swc (deflated 54%)
     adding: DL3/EBI22R.swc (deflated 53%)
     1. Failure: write.nrrd.header.for.file (@test-nrrd-io.R#132) -------------------
     error$message does not match "read.im3d".
     Actual value: "Unable to read data saved in format: am"
    
    
     testthat results ================================================================
     OK: 726 SKIPPED: 0 FAILED: 1
     1. Failure: write.nrrd.header.for.file (@test-nrrd-io.R#132)
    
     Error: testthat unit tests failed
     Execution halted
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.8.1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: dependencies in R code
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: S3 generic/method consistency
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: replacement functions
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: foreign function calls
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: R code for possible problems
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: for missing documentation entries
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: for code/documentation mismatches
Result: WARN
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
    Invalid MIT-MAGIC-COOKIE-1 key
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: Rd \usage sections
Result: NOTE
    Invalid MIT-MAGIC-COOKIE-1 key
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.8.1
Check: examples
Result: ERROR
    Running examples in ‘nat-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: MBL.surf
    > ### Title: Surface object (hxsurf) for the left mushroom body in FCWB
    > ### template space
    > ### Aliases: MBL.surf
    >
    > ### ** Examples
    >
    > plot3d(kcs20)
    Error in xyz.coords(x, y, z, xlab = xlabel, ylab = ylabel, zlab = zlabel, :
     'x' is a list, but does not have components 'x', 'y' and 'z'
    Calls: plot3d -> plot3d.default -> xyz.coords
    Execution halted
Flavor: r-release-osx-x86_64-mavericks